Gene annotation
Transcriptome id Sobic.004G046400.1
Synonym
Functional annotation rhodanese-like domain containing protein, putative, expressed
UniProt A0A194YMR4
Pfam PF00581
Panther DB PTHR12231 PTHR12231:SF112
NCBI CDD KOG1530; Rhodanese-related sulfurtransferase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G17850 : Rhodanese/Cell cycle control phosphatase superfamily protein
RAP-DB (Rice) LOC_Os02g06290.1 : rhodanese-like domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a035096 , Zm00025a034868
Brachypodium -
Barley -
Wheat TraesCS4D02G349800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G379700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
2 Sobic.003G249500 expressed protein -
3 Sobic.002G168400 RGH2B, putative, expressed -
4 Sobic.002G356500 expressed protein -
5 Sobic.009G183800 ICE-like protease p20 domain containing protein, putative, expressed -
6 Sobic.003G212300 mitochondrial chaperone BCS1, putative, expressed -
7 Sobic.004G106500 hydroquinone glucosyltransferase, putative, expressed -
8 Sobic.008G019900 - -
9 Sobic.004G037100 cycloartenol synthase, putative, expressed K01853: cycloartenol synthase
10 Sobic.007G108700 expressed protein -
11 Sobic.003G218500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsPOP2 - Putative Prolyl Oligopeptidase homologue, expressed -
12 Sobic.002G373900 lung seven transmembrane domain containing protein, putative, expressed -
13 Sobic.006G233800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Transferase family protein (At)(PubMedID : 27208977)@transferase family protein, putative, expressed -
14 Sobic.004G243000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@metalloendoproteinase 1 precursor, putative, expressed -
15 Sobic.004G246300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@membrane attack complex component/perforin/complement C9, putative, expressed -
16 Sobic.002G032900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
17 Sobic.004G089100 expressed protein -
18 Sobic.001G094800 similar to IAA1 protein(PubMedID : 29862293)@"domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA13 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
19 Sobic.002G218800 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
20 Sobic.006G091400 ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A


Gene co-expression network
sample Sobic004G046400 Sobic004G046400 Sobic002G379700 Sobic002G379700 Sobic004G046400--Sobic002G379700 Sobic003G249500 Sobic003G249500 Sobic004G046400--Sobic003G249500 Sobic002G168400 Sobic002G168400 Sobic004G046400--Sobic002G168400 Sobic002G356500 Sobic002G356500 Sobic004G046400--Sobic002G356500 Sobic009G183800 Sobic009G183800 Sobic004G046400--Sobic009G183800 Sobic003G212300 Sobic003G212300 Sobic004G046400--Sobic003G212300 Sobic004G106500 Sobic004G106500 Sobic004G046400--Sobic004G106500 Sobic008G019900 Sobic008G019900 Sobic004G046400--Sobic008G019900 Sobic004G037100 Sobic004G037100 Sobic004G046400--Sobic004G037100 Sobic002G379700--Sobic004G046400 Sobic004G246300 Sobic004G246300 Sobic002G379700--Sobic004G246300 Sobic002G032900 Sobic002G032900 Sobic002G379700--Sobic002G032900 Sobic010G204200 Sobic010G204200 Sobic002G379700--Sobic010G204200 Sobic007G108700 Sobic007G108700 Sobic002G379700--Sobic007G108700 Sobic002G379700--Sobic008G019900 Sobic001G375200 Sobic001G375200 Sobic002G379700--Sobic001G375200 Sobic002G379700--Sobic009G183800 Sobic006G092200 Sobic006G092200 Sobic002G379700--Sobic006G092200 Sobic002G373900 Sobic002G373900 Sobic003G249500--Sobic002G373900 Sobic001G029500 Sobic001G029500 Sobic003G249500--Sobic001G029500 Sobic004G191901 Sobic004G191901 Sobic003G249500--Sobic004G191901 Sobic001G128000 Sobic001G128000 Sobic003G249500--Sobic001G128000 Sobic006G233800 Sobic006G233800 Sobic003G249500--Sobic006G233800 Sobic003G160400 Sobic003G160400 Sobic003G249500--Sobic003G160400 Sobic010G267300 Sobic010G267300 Sobic003G249500--Sobic010G267300 Sobic008G033800 Sobic008G033800 Sobic003G249500--Sobic008G033800 Sobic003G119750 Sobic003G119750 Sobic003G249500--Sobic003G119750 Sobic002G168400--Sobic004G037100 Sobic002G168400--Sobic004G046400 Sobic002G424500 Sobic002G424500 Sobic002G168400--Sobic002G424500 Sobic002G168400--Sobic004G191901 Sobic002G168400--Sobic003G249500 Sobic002G168400--Sobic003G212300 Sobic002G325500 Sobic002G325500 Sobic002G168400--Sobic002G325500 Sobic002G168400--Sobic004G106500 Sobic001G299200 Sobic001G299200 Sobic002G168400--Sobic001G299200 Sobic002G356500--Sobic009G183800 Sobic002G356500--Sobic007G108700 Sobic005G228400 Sobic005G228400 Sobic002G356500--Sobic005G228400 Sobic002G356500--Sobic008G019900 Sobic002G281100 Sobic002G281100 Sobic002G356500--Sobic002G281100 Sobic001G062500 Sobic001G062500 Sobic002G356500--Sobic001G062500 Sobic002G218800 Sobic002G218800 Sobic002G356500--Sobic002G218800 Sobic002G356500--Sobic004G046400 Sobic009G035900 Sobic009G035900 Sobic002G356500--Sobic009G035900 Sobic010G212500 Sobic010G212500 Sobic009G183800--Sobic010G212500 Sobic005G215400 Sobic005G215400 Sobic009G183800--Sobic005G215400 Sobic004G348800 Sobic004G348800 Sobic009G183800--Sobic004G348800 Sobic001G379400 Sobic001G379400 Sobic009G183800--Sobic001G379400 Sobic003G119500 Sobic003G119500 Sobic009G183800--Sobic003G119500 Sobic002G301900 Sobic002G301900 Sobic009G183800--Sobic002G301900 Sobic010G045500 Sobic010G045500 Sobic009G183800--Sobic010G045500 Sobic006G089000 Sobic006G089000 Sobic009G183800--Sobic006G089000 Sobic004G297900 Sobic004G297900 Sobic009G183800--Sobic004G297900 Sobic003G212300--Sobic007G108700 Sobic003G212300--Sobic004G046400 Sobic005G096600 Sobic005G096600 Sobic003G212300--Sobic005G096600 Sobic003G024900 Sobic003G024900 Sobic003G212300--Sobic003G024900 Sobic003G212300--Sobic002G356500 Sobic004G163400 Sobic004G163400 Sobic003G212300--Sobic004G163400 Sobic001G021900 Sobic001G021900 Sobic003G212300--Sobic001G021900 Sobic002G235500 Sobic002G235500 Sobic003G212300--Sobic002G235500 Sobic002G042100 Sobic002G042100 Sobic003G212300--Sobic002G042100 Sobic004G106500--Sobic008G019900 Sobic004G187600 Sobic004G187600 Sobic004G106500--Sobic004G187600 Sobic008G078800 Sobic008G078800 Sobic004G106500--Sobic008G078800 Sobic004G106500--Sobic002G325500 Sobic004G106500--Sobic004G037100 Sobic004G106500--Sobic004G046400 Sobic002G165020 Sobic002G165020 Sobic004G106500--Sobic002G165020 Sobic006G266800 Sobic006G266800 Sobic004G106500--Sobic006G266800 Sobic007G005100 Sobic007G005100 Sobic004G106500--Sobic007G005100 Sobic003G240400 Sobic003G240400 Sobic008G019900--Sobic003G240400 Sobic006G019700 Sobic006G019700 Sobic008G019900--Sobic006G019700 Sobic006G028500 Sobic006G028500 Sobic008G019900--Sobic006G028500 Sobic003G182200 Sobic003G182200 Sobic008G019900--Sobic003G182200 Sobic004G322800 Sobic004G322800 Sobic008G019900--Sobic004G322800 Sobic010G148800 Sobic010G148800 Sobic008G019900--Sobic010G148800 Sobic010G152400 Sobic010G152400 Sobic008G019900--Sobic010G152400 Sobic008G034900 Sobic008G034900 Sobic008G019900--Sobic008G034900 Sobic010G082000 Sobic010G082000 Sobic008G019900--Sobic010G082000 Sobic004G037100--Sobic002G168400 Sobic004G037100--Sobic004G191901 Sobic009G092300 Sobic009G092300 Sobic004G037100--Sobic009G092300 Sobic004G037100--Sobic003G249500 Sobic009G074200 Sobic009G074200 Sobic004G037100--Sobic009G074200 Sobic001G494200 Sobic001G494200 Sobic004G037100--Sobic001G494200 Sobic001G487900 Sobic001G487900 Sobic004G037100--Sobic001G487900 Sobic007G137501 Sobic007G137501 Sobic004G037100--Sobic007G137501 Sobic002G138400 Sobic002G138400 Sobic004G037100--Sobic002G138400
Octagon: transcription factors


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