Gene annotation
Transcriptome id Sobic.006G091400.1
Synonym ATFP8, Sb06g017650, RABD1, ATRABD1
Functional annotation ras-related protein, putative, expressed
UniProt C5Y956
Pfam PF00025
Panther DB PTHR24073 PTHR24073:SF497
NCBI CDD KOG0084; GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins
KEGG Orthology K07874; Ras-related protein Rab-1A
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT3G11730 : Ras-related small GTP-binding family protein
RAP-DB (Rice) LOC_Os05g01490.1 : ras-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a017784 , Zm00025a011266
Brachypodium KQJ82833
Barley HORVU2Hr1G077230.6 , HORVU2Hr1G077230.11
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G019900 - -
2 Sobic.002G343100 protein kinase, putative, expressed -
3 Sobic.009G058600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
4 Sobic.001G375200 DUF567 domain containing protein, putative, expressed -
5 Sobic.006G019700 transferase family protein, putative, expressed -
6 Sobic.004G258900 - -
7 Sobic.002G250300 dehydrogenase, putative, expressed -
8 Sobic.010G116000 ZOS1-08 - C2H2 zinc finger protein, expressed -
9 Sobic.007G050200 DNA binding protein, putative, expressed -
10 Sobic.006G092200 RING-H2 finger protein ATL3F, putative, expressed K16286: E3 ubiquitin-protein ligase EL5
11 Sobic.003G182200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
12 Sobic.010G204200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 71D7, putative, expressed -
13 Sobic.002G101400 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
14 Sobic.004G323300 SCP-like extracellular protein, expressed -
15 Sobic.009G221500 lipid phosphatase protein, putative, expressed -
16 Sobic.004G322100 hypro1, putative, expressed -
17 Sobic.008G035800 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
18 Sobic.009G208700 POEI45 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
19 Sobic.003G324600 transcription factor-related, putative, expressed -
20 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein


Gene co-expression network
sample Sobic006G091400 Sobic006G091400 Sobic008G019900 Sobic008G019900 Sobic006G091400--Sobic008G019900 Sobic002G343100 Sobic002G343100 Sobic006G091400--Sobic002G343100 Sobic009G058600 Sobic009G058600 Sobic006G091400--Sobic009G058600 Sobic001G375200 Sobic001G375200 Sobic006G091400--Sobic001G375200 Sobic006G019700 Sobic006G019700 Sobic006G091400--Sobic006G019700 Sobic004G258900 Sobic004G258900 Sobic006G091400--Sobic004G258900 Sobic002G250300 Sobic002G250300 Sobic006G091400--Sobic002G250300 Sobic010G116000 Sobic010G116000 Sobic006G091400--Sobic010G116000 Sobic007G050200 Sobic007G050200 Sobic006G091400--Sobic007G050200 Sobic003G240400 Sobic003G240400 Sobic008G019900--Sobic003G240400 Sobic008G019900--Sobic006G019700 Sobic006G028500 Sobic006G028500 Sobic008G019900--Sobic006G028500 Sobic003G182200 Sobic003G182200 Sobic008G019900--Sobic003G182200 Sobic004G322800 Sobic004G322800 Sobic008G019900--Sobic004G322800 Sobic010G148800 Sobic010G148800 Sobic008G019900--Sobic010G148800 Sobic010G152400 Sobic010G152400 Sobic008G019900--Sobic010G152400 Sobic008G034900 Sobic008G034900 Sobic008G019900--Sobic008G034900 Sobic010G082000 Sobic010G082000 Sobic008G019900--Sobic010G082000 Sobic009G181600 Sobic009G181600 Sobic002G343100--Sobic009G181600 Sobic009G208700 Sobic009G208700 Sobic002G343100--Sobic009G208700 Sobic003G282300 Sobic003G282300 Sobic002G343100--Sobic003G282300 Sobic007G090600 Sobic007G090600 Sobic002G343100--Sobic007G090600 Sobic010G130500 Sobic010G130500 Sobic002G343100--Sobic010G130500 Sobic006G092700 Sobic006G092700 Sobic002G343100--Sobic006G092700 Sobic004G322000 Sobic004G322000 Sobic002G343100--Sobic004G322000 Sobic008G035800 Sobic008G035800 Sobic002G343100--Sobic008G035800 Sobic007G086300 Sobic007G086300 Sobic002G343100--Sobic007G086300 Sobic004G112200 Sobic004G112200 Sobic009G058600--Sobic004G112200 Sobic003G419300 Sobic003G419300 Sobic009G058600--Sobic003G419300 Sobic001G232000 Sobic001G232000 Sobic009G058600--Sobic001G232000 Sobic004G323300 Sobic004G323300 Sobic009G058600--Sobic004G323300 Sobic003G324600 Sobic003G324600 Sobic009G058600--Sobic003G324600 Sobic001G542000 Sobic001G542000 Sobic009G058600--Sobic001G542000 Sobic009G058600--Sobic008G035800 Sobic001G542200 Sobic001G542200 Sobic009G058600--Sobic001G542200 Sobic009G058600--Sobic002G343100 Sobic006G256900 Sobic006G256900 Sobic001G375200--Sobic006G256900 Sobic001G183700 Sobic001G183700 Sobic001G375200--Sobic001G183700 Sobic001G506800 Sobic001G506800 Sobic001G375200--Sobic001G506800 Sobic010G241700 Sobic010G241700 Sobic001G375200--Sobic010G241700 Sobic001G375200--Sobic010G148800 Sobic003G152200 Sobic003G152200 Sobic001G375200--Sobic003G152200 Sobic010G204200 Sobic010G204200 Sobic001G375200--Sobic010G204200 Sobic005G072900 Sobic005G072900 Sobic001G375200--Sobic005G072900 Sobic002G385500 Sobic002G385500 Sobic001G375200--Sobic002G385500 Sobic004G306900 Sobic004G306900 Sobic006G019700--Sobic004G306900 Sobic006G019700--Sobic003G182200 Sobic006G019700--Sobic006G028500 Sobic004G322100 Sobic004G322100 Sobic006G019700--Sobic004G322100 Sobic006G019700--Sobic010G082000 Sobic006G019700--Sobic006G092700 Sobic006G019700--Sobic010G152400 Sobic006G135300 Sobic006G135300 Sobic006G019700--Sobic006G135300 Sobic003G000100 Sobic003G000100 Sobic006G019700--Sobic003G000100 Sobic004G258900--Sobic007G050200 Sobic005G041300 Sobic005G041300 Sobic004G258900--Sobic005G041300 Sobic002G216100 Sobic002G216100 Sobic004G258900--Sobic002G216100 Sobic001G430100 Sobic001G430100 Sobic004G258900--Sobic001G430100 Sobic005G065900 Sobic005G065900 Sobic004G258900--Sobic005G065900 Sobic002G404100 Sobic002G404100 Sobic004G258900--Sobic002G404100 Sobic009G221500 Sobic009G221500 Sobic004G258900--Sobic009G221500 Sobic002G101400 Sobic002G101400 Sobic004G258900--Sobic002G101400 Sobic004G258900--Sobic010G148800 Sobic002G250300--Sobic002G343100 Sobic010G199500 Sobic010G199500 Sobic002G250300--Sobic010G199500 Sobic002G250300--Sobic009G181600 Sobic002G250300--Sobic009G208700 Sobic002G250300--Sobic004G322100 Sobic002G250300--Sobic006G092700 Sobic002G250300--Sobic004G323300 Sobic004G271800 Sobic004G271800 Sobic002G250300--Sobic004G271800 Sobic010G028100 Sobic010G028100 Sobic002G250300--Sobic010G028100 Sobic005G061200 Sobic005G061200 Sobic010G116000--Sobic005G061200 Sobic007G176000 Sobic007G176000 Sobic010G116000--Sobic007G176000 Sobic010G096400 Sobic010G096400 Sobic010G116000--Sobic010G096400 Sobic009G088900 Sobic009G088900 Sobic010G116000--Sobic009G088900 Sobic007G178900 Sobic007G178900 Sobic010G116000--Sobic007G178900 Sobic002G368300 Sobic002G368300 Sobic010G116000--Sobic002G368300 Sobic002G165020 Sobic002G165020 Sobic010G116000--Sobic002G165020 Sobic001G250100 Sobic001G250100 Sobic010G116000--Sobic001G250100 Sobic009G088500 Sobic009G088500 Sobic010G116000--Sobic009G088500 Sobic007G050200--Sobic004G322100 Sobic007G050200--Sobic004G323300 Sobic007G050200--Sobic009G221500 Sobic003G140700 Sobic003G140700 Sobic007G050200--Sobic003G140700 Sobic007G050200--Sobic001G430100 Sobic007G050200--Sobic006G256900 Sobic001G058300 Sobic001G058300 Sobic007G050200--Sobic001G058300 Sobic009G199001 Sobic009G199001 Sobic007G050200--Sobic009G199001 Sobic009G219200 Sobic009G219200 Sobic007G050200--Sobic009G219200
Octagon: transcription factors


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