Gene annotation
Transcriptome id Sobic.010G116000.1
Synonym ZFP6, Sb10g010070
Functional annotation ZOS1-08 - C2H2 zinc finger protein, expressed
UniProt C5Z8J9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67030 : zinc finger protein 6
RAP-DB (Rice) LOC_Os01g32920.1 : ZOS1-08 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a050456 , Zm00025a023604 , Zm00025a035567
Brachypodium KQK02547
Barley HORVU3Hr1G007060.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G061200 dirigent, putative, expressed -
2 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
3 Sobic.010G096400 proteins of unknown function domain containing protein, expressed -
4 Sobic.009G088900 membrane associated DUF588 domain containing protein, putative, expressed -
5 Sobic.007G178900 CXE carboxylesterase, putative, expressed -
6 Sobic.002G368300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@COBRA-like protein precursor, putative, expressed -
7 Sobic.002G165020 - -
8 Sobic.001G250100 thaumatin, putative, expressed -
9 Sobic.009G088500 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.004G038700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR5 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
11 Sobic.010G113100 cytokinin-O-glucosyltransferase 2, putative, expressed -
12 Sobic.007G218800 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ (54% identity with SbCCoAOMT/70.9% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K18883: tricin synthase
13 Sobic.002G216100 cytochrome P450, putative, expressed -
14 Sobic.008G055100 dirigent, putative, expressed -
15 Sobic.006G092200 RING-H2 finger protein ATL3F, putative, expressed K16286: E3 ubiquitin-protein ligase EL5
16 Sobic.002G311501 - -
17 Sobic.008G019900 - -
18 Sobic.006G091400 ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
19 Sobic.006G019700 transferase family protein, putative, expressed -
20 Sobic.002G365801 - -


Gene co-expression network
sample Sobic010G116000 Sobic010G116000 Sobic005G061200 Sobic005G061200 Sobic010G116000--Sobic005G061200 Sobic007G176000 Sobic007G176000 Sobic010G116000--Sobic007G176000 Sobic010G096400 Sobic010G096400 Sobic010G116000--Sobic010G096400 Sobic009G088900 Sobic009G088900 Sobic010G116000--Sobic009G088900 Sobic007G178900 Sobic007G178900 Sobic010G116000--Sobic007G178900 Sobic002G368300 Sobic002G368300 Sobic010G116000--Sobic002G368300 Sobic002G165020 Sobic002G165020 Sobic010G116000--Sobic002G165020 Sobic001G250100 Sobic001G250100 Sobic010G116000--Sobic001G250100 Sobic009G088500 Sobic009G088500 Sobic010G116000--Sobic009G088500 Sobic005G061200--Sobic009G088900 Sobic005G061200--Sobic007G176000 Sobic002G154600 Sobic002G154600 Sobic005G061200--Sobic002G154600 Sobic001G261460 Sobic001G261460 Sobic005G061200--Sobic001G261460 Sobic001G514200 Sobic001G514200 Sobic005G061200--Sobic001G514200 Sobic007G218800 Sobic007G218800 Sobic005G061200--Sobic007G218800 Sobic008G055100 Sobic008G055100 Sobic005G061200--Sobic008G055100 Sobic005G061200--Sobic007G178900 Sobic002G261500 Sobic002G261500 Sobic005G061200--Sobic002G261500 Sobic007G176100 Sobic007G176100 Sobic007G176000--Sobic007G176100 Sobic007G176000--Sobic007G178900 Sobic007G030501 Sobic007G030501 Sobic007G176000--Sobic007G030501 Sobic002G216100 Sobic002G216100 Sobic007G176000--Sobic002G216100 Sobic006G197100 Sobic006G197100 Sobic007G176000--Sobic006G197100 Sobic007G176000--Sobic005G061200 Sobic002G185800 Sobic002G185800 Sobic007G176000--Sobic002G185800 Sobic004G139300 Sobic004G139300 Sobic007G176000--Sobic004G139300 Sobic007G176000--Sobic008G055100 Sobic010G096400--Sobic008G055100 Sobic010G096400--Sobic004G139300 Sobic002G365550 Sobic002G365550 Sobic010G096400--Sobic002G365550 Sobic002G365801 Sobic002G365801 Sobic010G096400--Sobic002G365801 Sobic010G096400--Sobic009G088500 Sobic010G096400--Sobic002G216100 Sobic001G360500 Sobic001G360500 Sobic010G096400--Sobic001G360500 Sobic010G096400--Sobic002G368300 Sobic010G096400--Sobic007G176000 Sobic009G088900--Sobic008G055100 Sobic001G059700 Sobic001G059700 Sobic009G088900--Sobic001G059700 Sobic003G053400 Sobic003G053400 Sobic009G088900--Sobic003G053400 Sobic009G088900--Sobic005G061200 Sobic009G088900--Sobic002G365801 Sobic009G088900--Sobic002G154600 Sobic009G088900--Sobic007G218800 Sobic009G088900--Sobic002G261500 Sobic009G088900--Sobic002G368300 Sobic007G178900--Sobic007G176000 Sobic007G178900--Sobic002G216100 Sobic007G178900--Sobic004G139300 Sobic007G178900--Sobic002G185800 Sobic005G046700 Sobic005G046700 Sobic007G178900--Sobic005G046700 Sobic007G178900--Sobic002G368300 Sobic007G178900--Sobic006G197100 Sobic007G178900--Sobic008G055100 Sobic007G178900--Sobic007G176100 Sobic002G368300--Sobic002G365801 Sobic002G368300--Sobic007G178900 Sobic004G071000 Sobic004G071000 Sobic002G368300--Sobic004G071000 Sobic002G365500 Sobic002G365500 Sobic002G368300--Sobic002G365500 Sobic002G368300--Sobic002G365550 Sobic002G368300--Sobic010G096400 Sobic002G368300--Sobic009G088900 Sobic010G212500 Sobic010G212500 Sobic002G368300--Sobic010G212500 Sobic002G368300--Sobic007G176000 Sobic006G183900 Sobic006G183900 Sobic002G165020--Sobic006G183900 Sobic004G248500 Sobic004G248500 Sobic002G165020--Sobic004G248500 Sobic008G035700 Sobic008G035700 Sobic002G165020--Sobic008G035700 Sobic007G109600 Sobic007G109600 Sobic002G165020--Sobic007G109600 Sobic003G287200 Sobic003G287200 Sobic002G165020--Sobic003G287200 Sobic006G117500 Sobic006G117500 Sobic002G165020--Sobic006G117500 Sobic010G096700 Sobic010G096700 Sobic002G165020--Sobic010G096700 Sobic002G235800 Sobic002G235800 Sobic002G165020--Sobic002G235800 Sobic010G274400 Sobic010G274400 Sobic002G165020--Sobic010G274400 Sobic001G059600 Sobic001G059600 Sobic001G250100--Sobic001G059600 Sobic006G160900 Sobic006G160900 Sobic001G250100--Sobic006G160900 Sobic001G471800 Sobic001G471800 Sobic001G250100--Sobic001G471800 Sobic009G008800 Sobic009G008800 Sobic001G250100--Sobic009G008800 Sobic002G030800 Sobic002G030800 Sobic001G250100--Sobic002G030800 Sobic010G014400 Sobic010G014400 Sobic001G250100--Sobic010G014400 Sobic003G183300 Sobic003G183300 Sobic001G250100--Sobic003G183300 Sobic001G163800 Sobic001G163800 Sobic001G250100--Sobic001G163800 Sobic004G193500 Sobic004G193500 Sobic001G250100--Sobic004G193500 Sobic007G057400 Sobic007G057400 Sobic009G088500--Sobic007G057400 Sobic002G385500 Sobic002G385500 Sobic009G088500--Sobic002G385500 Sobic004G322100 Sobic004G322100 Sobic009G088500--Sobic004G322100 Sobic009G088500--Sobic010G096400 Sobic009G088500--Sobic001G360500 Sobic009G088500--Sobic002G261500 Sobic008G019800 Sobic008G019800 Sobic009G088500--Sobic008G019800 Sobic005G063400 Sobic005G063400 Sobic009G088500--Sobic005G063400 Sobic010G152400 Sobic010G152400 Sobic009G088500--Sobic010G152400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.