Gene annotation
Transcriptome id Sobic.001G375200.1
Synonym Sb01g035630
Functional annotation DUF567 domain containing protein, putative, expressed
UniProt A0A1B6QN97
Pfam PF04525
Panther DB PTHR31087 PTHR31087:SF25
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14260 : Protein of unknown function (DUF567)
RAP-DB (Rice) LOC_Os03g22410.1 : DUF567 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a002408
Brachypodium KQK21733
Barley HORVU2Hr1G019720.1 , HORVU2Hr1G019720.2 , HORVU6Hr1G081400.2 , HORVU6Hr1G081400.1
Wheat TraesCS2B02G132800 , TraesCS2A02G113800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
2 Sobic.001G183700 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
3 Sobic.001G506800 exostosin family domain containing protein, expressed -
4 Sobic.010G241700 - -
5 Sobic.010G148800 WRKY31, expressed -
6 Sobic.003G152200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.010G204200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 71D7, putative, expressed -
8 Sobic.005G072900 stress responsive protein, putative, expressed -
9 Sobic.002G385500 ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
10 Sobic.010G113100 cytokinin-O-glucosyltransferase 2, putative, expressed -
11 Sobic.003G015300 expressed protein -
12 Sobic.005G065900 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
13 Sobic.004G322800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.008G164450 - -
15 Sobic.004G139300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 71D10, putative, expressed -
16 Sobic.002G101400 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
17 Sobic.008G019900 - -
18 Sobic.003G183600 Contains 1 SPX domain (protein involved in vacuolar phosphate accumulation)(PubMedID : 24655390)@Contains 1 SPX domain (protein involved in vacuolar phosphate accumulation)(PubMedID : 24655390)@SPX domain-containing protein, putative, expressed -
19 Sobic.003G351600 expressed protein -
20 Sobic.007G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@patatin, putative, expressed -


Gene co-expression network
sample Sobic001G375200 Sobic001G375200 Sobic006G256900 Sobic006G256900 Sobic001G375200--Sobic006G256900 Sobic001G183700 Sobic001G183700 Sobic001G375200--Sobic001G183700 Sobic001G506800 Sobic001G506800 Sobic001G375200--Sobic001G506800 Sobic010G241700 Sobic010G241700 Sobic001G375200--Sobic010G241700 Sobic010G148800 Sobic010G148800 Sobic001G375200--Sobic010G148800 Sobic003G152200 Sobic003G152200 Sobic001G375200--Sobic003G152200 Sobic010G204200 Sobic010G204200 Sobic001G375200--Sobic010G204200 Sobic005G072900 Sobic005G072900 Sobic001G375200--Sobic005G072900 Sobic002G385500 Sobic002G385500 Sobic001G375200--Sobic002G385500 Sobic006G256900--Sobic010G148800 Sobic005G065900 Sobic005G065900 Sobic006G256900--Sobic005G065900 Sobic007G050200 Sobic007G050200 Sobic006G256900--Sobic007G050200 Sobic009G199001 Sobic009G199001 Sobic006G256900--Sobic009G199001 Sobic006G197100 Sobic006G197100 Sobic006G256900--Sobic006G197100 Sobic009G221500 Sobic009G221500 Sobic006G256900--Sobic009G221500 Sobic003G140700 Sobic003G140700 Sobic006G256900--Sobic003G140700 Sobic004G322100 Sobic004G322100 Sobic006G256900--Sobic004G322100 Sobic001G058300 Sobic001G058300 Sobic006G256900--Sobic001G058300 Sobic010G070300 Sobic010G070300 Sobic001G183700--Sobic010G070300 Sobic001G360400 Sobic001G360400 Sobic001G183700--Sobic001G360400 Sobic004G009500 Sobic004G009500 Sobic001G183700--Sobic004G009500 Sobic003G015300 Sobic003G015300 Sobic001G183700--Sobic003G015300 Sobic010G113100 Sobic010G113100 Sobic001G183700--Sobic010G113100 Sobic001G183700--Sobic001G375200 Sobic001G183700--Sobic003G152200 Sobic006G251400 Sobic006G251400 Sobic001G183700--Sobic006G251400 Sobic001G183700--Sobic002G385500 Sobic008G164450 Sobic008G164450 Sobic001G506800--Sobic008G164450 Sobic003G007400 Sobic003G007400 Sobic001G506800--Sobic003G007400 Sobic009G181600 Sobic009G181600 Sobic001G506800--Sobic009G181600 Sobic006G092700 Sobic006G092700 Sobic001G506800--Sobic006G092700 Sobic006G135300 Sobic006G135300 Sobic001G506800--Sobic006G135300 Sobic010G214300 Sobic010G214300 Sobic001G506800--Sobic010G214300 Sobic001G506800--Sobic010G113100 Sobic001G274400 Sobic001G274400 Sobic001G506800--Sobic001G274400 Sobic010G028100 Sobic010G028100 Sobic001G506800--Sobic010G028100 Sobic010G241700--Sobic006G256900 Sobic001G438200 Sobic001G438200 Sobic010G241700--Sobic001G438200 Sobic001G062500 Sobic001G062500 Sobic010G241700--Sobic001G062500 Sobic010G241700--Sobic010G148800 Sobic007G100700 Sobic007G100700 Sobic010G241700--Sobic007G100700 Sobic010G241700--Sobic001G058300 Sobic003G319400 Sobic003G319400 Sobic010G241700--Sobic003G319400 Sobic006G106900 Sobic006G106900 Sobic010G241700--Sobic006G106900 Sobic010G241700--Sobic009G181600 Sobic010G148800--Sobic005G065900 Sobic004G322800 Sobic004G322800 Sobic010G148800--Sobic004G322800 Sobic010G148800--Sobic006G256900 Sobic005G066432 Sobic005G066432 Sobic010G148800--Sobic005G066432 Sobic010G148800--Sobic009G199001 Sobic002G404100 Sobic002G404100 Sobic010G148800--Sobic002G404100 Sobic002G042200 Sobic002G042200 Sobic010G148800--Sobic002G042200 Sobic009G219200 Sobic009G219200 Sobic010G148800--Sobic009G219200 Sobic006G079300 Sobic006G079300 Sobic010G148800--Sobic006G079300 Sobic003G152200--Sobic006G256900 Sobic001G147900 Sobic001G147900 Sobic003G152200--Sobic001G147900 Sobic003G152200--Sobic002G042200 Sobic004G024100 Sobic004G024100 Sobic003G152200--Sobic004G024100 Sobic003G152200--Sobic005G065900 Sobic003G404600 Sobic003G404600 Sobic003G152200--Sobic003G404600 Sobic003G152200--Sobic003G015300 Sobic003G368600 Sobic003G368600 Sobic003G152200--Sobic003G368600 Sobic006G243600 Sobic006G243600 Sobic003G152200--Sobic006G243600 Sobic010G204200--Sobic010G214300 Sobic010G204200--Sobic001G506800 Sobic010G204200--Sobic010G113100 Sobic010G204200--Sobic007G100700 Sobic010G204200--Sobic008G164450 Sobic008G011700 Sobic008G011700 Sobic010G204200--Sobic008G011700 Sobic001G209300 Sobic001G209300 Sobic010G204200--Sobic001G209300 Sobic007G047500 Sobic007G047500 Sobic010G204200--Sobic007G047500 Sobic010G204200--Sobic009G181600 Sobic005G202300 Sobic005G202300 Sobic005G072900--Sobic005G202300 Sobic006G277700 Sobic006G277700 Sobic005G072900--Sobic006G277700 Sobic003G020200 Sobic003G020200 Sobic005G072900--Sobic003G020200 Sobic005G063400 Sobic005G063400 Sobic005G072900--Sobic005G063400 Sobic005G072900--Sobic003G319400 Sobic006G174300 Sobic006G174300 Sobic005G072900--Sobic006G174300 Sobic004G029400 Sobic004G029400 Sobic005G072900--Sobic004G029400 Sobic005G072900--Sobic001G506800 Sobic005G072900--Sobic006G106900 Sobic003G000100 Sobic003G000100 Sobic002G385500--Sobic003G000100 Sobic010G152400 Sobic010G152400 Sobic002G385500--Sobic010G152400 Sobic004G029100 Sobic004G029100 Sobic002G385500--Sobic004G029100 Sobic009G088500 Sobic009G088500 Sobic002G385500--Sobic009G088500 Sobic006G003100 Sobic006G003100 Sobic002G385500--Sobic006G003100 Sobic008G019800 Sobic008G019800 Sobic002G385500--Sobic008G019800 Sobic008G068300 Sobic008G068300 Sobic002G385500--Sobic008G068300 Sobic002G385500--Sobic004G322100 Sobic006G089000 Sobic006G089000 Sobic002G385500--Sobic006G089000
Octagon: transcription factors


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