Gene annotation
Transcriptome id Sobic.003G218500.1
Synonym Sb03g027720
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
OsPOP2 - Putative Prolyl Oligopeptidase homologue, expressed
UniProt A0A1B6Q4P4
Pfam PF12695
Panther DB PTHR10655 PTHR10655:SF28
NCBI CDD KOG2112; Lysophospholipase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G52700 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g42690.1 : OsPOP2 - Putative Prolyl Oligopeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a028704 , Zm00025a036753
Brachypodium KQK08693
Barley -
Wheat TraesCS3A02G219200 , TraesCS3B02G249600 , TraesCS3B02G249600 , TraesCS3D02G233300 , TraesCS3D02G233300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G046400 rhodanese-like domain containing protein, putative, expressed -
2 Sobic.003G249500 expressed protein -
3 Sobic.010G192700 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
4 Sobic.008G033800 ABCG protein(PubMedID : 21265893)@pleiotropic drug resistance protein 15, putative, expressed -
5 Sobic.006G233800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Transferase family protein (At)(PubMedID : 27208977)@transferase family protein, putative, expressed -
6 Sobic.003G348900 disease resistance-responsive family protein, putative, expressed -
7 Sobic.002G325500 ankyrin repeat family protein, putative, expressed -
8 Sobic.010G256600 glycosyltransferase, putative, expressed -
9 Sobic.002G356500 expressed protein -
10 Sobic.010G224100 expressed protein -
11 Sobic.003G134100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@eukaryotic translation initiation factor 6, putative, expressed K03264: translation initiation factor 6
12 Sobic.004G191901 - K09264: MADS-box transcription factor, plant
13 Sobic.007G108700 expressed protein -
14 Sobic.007G022300 carrier, putative, expressed -
15 Sobic.005G013901 - -
16 Sobic.007G138600 no apical meristem protein, putative, expressed -
17 Sobic.002G424500 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
18 Sobic.002G373900 lung seven transmembrane domain containing protein, putative, expressed -
19 Sobic.001G515400 AMP-binding enzyme, putative, expressed -
20 Sobic.003G212300 mitochondrial chaperone BCS1, putative, expressed -


Gene co-expression network
sample Sobic003G218500 Sobic003G218500 Sobic004G046400 Sobic004G046400 Sobic003G218500--Sobic004G046400 Sobic003G249500 Sobic003G249500 Sobic003G218500--Sobic003G249500 Sobic010G192700 Sobic010G192700 Sobic003G218500--Sobic010G192700 Sobic008G033800 Sobic008G033800 Sobic003G218500--Sobic008G033800 Sobic006G233800 Sobic006G233800 Sobic003G218500--Sobic006G233800 Sobic003G348900 Sobic003G348900 Sobic003G218500--Sobic003G348900 Sobic002G325500 Sobic002G325500 Sobic003G218500--Sobic002G325500 Sobic010G256600 Sobic010G256600 Sobic003G218500--Sobic010G256600 Sobic002G356500 Sobic002G356500 Sobic003G218500--Sobic002G356500 Sobic002G379700 Sobic002G379700 Sobic004G046400--Sobic002G379700 Sobic004G046400--Sobic003G249500 Sobic002G168400 Sobic002G168400 Sobic004G046400--Sobic002G168400 Sobic004G046400--Sobic002G356500 Sobic009G183800 Sobic009G183800 Sobic004G046400--Sobic009G183800 Sobic003G212300 Sobic003G212300 Sobic004G046400--Sobic003G212300 Sobic004G106500 Sobic004G106500 Sobic004G046400--Sobic004G106500 Sobic008G019900 Sobic008G019900 Sobic004G046400--Sobic008G019900 Sobic004G037100 Sobic004G037100 Sobic004G046400--Sobic004G037100 Sobic002G373900 Sobic002G373900 Sobic003G249500--Sobic002G373900 Sobic001G029500 Sobic001G029500 Sobic003G249500--Sobic001G029500 Sobic004G191901 Sobic004G191901 Sobic003G249500--Sobic004G191901 Sobic001G128000 Sobic001G128000 Sobic003G249500--Sobic001G128000 Sobic003G249500--Sobic006G233800 Sobic003G160400 Sobic003G160400 Sobic003G249500--Sobic003G160400 Sobic010G267300 Sobic010G267300 Sobic003G249500--Sobic010G267300 Sobic003G249500--Sobic008G033800 Sobic003G119750 Sobic003G119750 Sobic003G249500--Sobic003G119750 Sobic010G229300 Sobic010G229300 Sobic010G192700--Sobic010G229300 Sobic003G186066 Sobic003G186066 Sobic010G192700--Sobic003G186066 Sobic003G120900 Sobic003G120900 Sobic010G192700--Sobic003G120900 Sobic002G153600 Sobic002G153600 Sobic010G192700--Sobic002G153600 Sobic010G192700--Sobic003G348900 Sobic006G232100 Sobic006G232100 Sobic010G192700--Sobic006G232100 Sobic006G112000 Sobic006G112000 Sobic010G192700--Sobic006G112000 Sobic003G008200 Sobic003G008200 Sobic010G192700--Sobic003G008200 Sobic001G097800 Sobic001G097800 Sobic010G192700--Sobic001G097800 Sobic007G138600 Sobic007G138600 Sobic008G033800--Sobic007G138600 Sobic006G135701 Sobic006G135701 Sobic008G033800--Sobic006G135701 Sobic002G220400 Sobic002G220400 Sobic008G033800--Sobic002G220400 Sobic001G450900 Sobic001G450900 Sobic008G033800--Sobic001G450900 Sobic008G033800--Sobic004G191901 Sobic001G118050 Sobic001G118050 Sobic008G033800--Sobic001G118050 Sobic006G206600 Sobic006G206600 Sobic008G033800--Sobic006G206600 Sobic004G019550 Sobic004G019550 Sobic008G033800--Sobic004G019550 Sobic009G218700 Sobic009G218700 Sobic008G033800--Sobic009G218700 Sobic006G233800--Sobic002G373900 Sobic006G233800--Sobic003G249500 Sobic005G013901 Sobic005G013901 Sobic006G233800--Sobic005G013901 Sobic002G025000 Sobic002G025000 Sobic006G233800--Sobic002G025000 Sobic009G074200 Sobic009G074200 Sobic006G233800--Sobic009G074200 Sobic004G234766 Sobic004G234766 Sobic006G233800--Sobic004G234766 Sobic007G201200 Sobic007G201200 Sobic006G233800--Sobic007G201200 Sobic007G149750 Sobic007G149750 Sobic006G233800--Sobic007G149750 Sobic003G169400 Sobic003G169400 Sobic006G233800--Sobic003G169400 Sobic003G348900--Sobic006G112000 Sobic003G348900--Sobic008G033800 Sobic001G207301 Sobic001G207301 Sobic003G348900--Sobic001G207301 Sobic004G291300 Sobic004G291300 Sobic003G348900--Sobic004G291300 Sobic006G205800 Sobic006G205800 Sobic003G348900--Sobic006G205800 Sobic003G348900--Sobic004G191901 Sobic002G076350 Sobic002G076350 Sobic003G348900--Sobic002G076350 Sobic006G146700 Sobic006G146700 Sobic003G348900--Sobic006G146700 Sobic001G136850 Sobic001G136850 Sobic003G348900--Sobic001G136850 Sobic001G035300 Sobic001G035300 Sobic002G325500--Sobic001G035300 Sobic002G424500 Sobic002G424500 Sobic002G325500--Sobic002G424500 Sobic007G005100 Sobic007G005100 Sobic002G325500--Sobic007G005100 Sobic002G325500--Sobic004G106500 Sobic001G228900 Sobic001G228900 Sobic002G325500--Sobic001G228900 Sobic007G061600 Sobic007G061600 Sobic002G325500--Sobic007G061600 Sobic008G078800 Sobic008G078800 Sobic002G325500--Sobic008G078800 Sobic002G325500--Sobic008G019900 SobicK010100 SobicK010100 Sobic002G325500--SobicK010100 Sobic010G256600--Sobic003G249500 Sobic003G055400 Sobic003G055400 Sobic010G256600--Sobic003G055400 Sobic002G325200 Sobic002G325200 Sobic010G256600--Sobic002G325200 Sobic009G231600 Sobic009G231600 Sobic010G256600--Sobic009G231600 Sobic006G108500 Sobic006G108500 Sobic010G256600--Sobic006G108500 Sobic010G256600--Sobic008G033800 Sobic006G094800 Sobic006G094800 Sobic010G256600--Sobic006G094800 Sobic003G314200 Sobic003G314200 Sobic010G256600--Sobic003G314200 Sobic003G337400 Sobic003G337400 Sobic010G256600--Sobic003G337400 Sobic002G356500--Sobic009G183800 Sobic007G108700 Sobic007G108700 Sobic002G356500--Sobic007G108700 Sobic005G228400 Sobic005G228400 Sobic002G356500--Sobic005G228400 Sobic002G356500--Sobic008G019900 Sobic002G281100 Sobic002G281100 Sobic002G356500--Sobic002G281100 Sobic001G062500 Sobic001G062500 Sobic002G356500--Sobic001G062500 Sobic002G218800 Sobic002G218800 Sobic002G356500--Sobic002G218800 Sobic002G356500--Sobic004G046400 Sobic009G035900 Sobic009G035900 Sobic002G356500--Sobic009G035900
Octagon: transcription factors


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