Gene annotation
Transcriptome id Sobic.002G381200.1
Synonym Sb02g039770
Functional annotation expressed protein
UniProt C5X2I9
Pfam -
Panther DB PTHR35503 PTHR35503:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G10210 : -
RAP-DB (Rice) LOC_Os07g43130.1 : expressed protein
MaizeGDB (Corn) Zm00025a015244
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G078800 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase
2 Sobic.004G187600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
3 Sobic.009G136800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
4 Sobic.003G317300 "a rapidly evolving gene family, termed Rp1/Pi37, which had an effector response that confers resistance to multiple pathogens across species."(PubMedID : 25928459)@rp1, putative, expressed -
5 Sobic.008G099232 - -
6 Sobic.005G069332 - -
7 Sobic.007G064900 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
8 Sobic.007G148100 MLA6 protein, putative, expressed -
9 Sobic.004G080300 -(PubMedID : 23108465)@MONOCULM 1, putative, expressed -
10 Sobic.001G272800 NBS-LRR disease resistance protein, putative, expressed -
11 Sobic.009G174300 "Capable of trans-activating SbMATE promoter alleles harboring one, four, and five copies of the MITE repeats "(PubMedID : 30545913)@WRKY84, expressed -
12 Sobic.010G126800 lectin-like receptor kinase 7, putative, expressed -
13 Sobic.005G053100 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
14 Sobic.002G063700 NB-ARC domain containing protein, expressed -
15 Sobic.009G165100 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
16 Sobic.009G225800 expressed protein -
17 Sobic.003G428800 "basic helix-loop-helix (bHLH) transcription factor, downregulates lignin synthesis in Arabidopisis"(PubMedID : 23698629)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Closest homologue of rice OsIRO2.(PubMedID : 16887895)@helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.004G299500 - -
19 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
20 Sobic.008G105800 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic002G381200 Sobic002G381200 Sobic008G078800 Sobic008G078800 Sobic002G381200--Sobic008G078800 Sobic004G187600 Sobic004G187600 Sobic002G381200--Sobic004G187600 Sobic009G136800 Sobic009G136800 Sobic002G381200--Sobic009G136800 Sobic003G317300 Sobic003G317300 Sobic002G381200--Sobic003G317300 Sobic008G099232 Sobic008G099232 Sobic002G381200--Sobic008G099232 Sobic005G069332 Sobic005G069332 Sobic002G381200--Sobic005G069332 Sobic007G064900 Sobic007G064900 Sobic002G381200--Sobic007G064900 Sobic007G148100 Sobic007G148100 Sobic002G381200--Sobic007G148100 Sobic004G080300 Sobic004G080300 Sobic002G381200--Sobic004G080300 Sobic008G078800--Sobic002G381200 Sobic008G078800--Sobic004G187600 Sobic010G032500 Sobic010G032500 Sobic008G078800--Sobic010G032500 Sobic008G078800--Sobic007G148100 Sobic002G417600 Sobic002G417600 Sobic008G078800--Sobic002G417600 Sobic007G005100 Sobic007G005100 Sobic008G078800--Sobic007G005100 Sobic008G078800--Sobic009G136800 Sobic004G106500 Sobic004G106500 Sobic008G078800--Sobic004G106500 Sobic009G174300 Sobic009G174300 Sobic008G078800--Sobic009G174300 Sobic009G225800 Sobic009G225800 Sobic004G187600--Sobic009G225800 Sobic005G212800 Sobic005G212800 Sobic004G187600--Sobic005G212800 Sobic004G187600--Sobic009G136800 Sobic001G234100 Sobic001G234100 Sobic004G187600--Sobic001G234100 Sobic005G101000 Sobic005G101000 Sobic004G187600--Sobic005G101000 Sobic004G299500 Sobic004G299500 Sobic004G187600--Sobic004G299500 Sobic005G219500 Sobic005G219500 Sobic004G187600--Sobic005G219500 Sobic001G395900 Sobic001G395900 Sobic004G187600--Sobic001G395900 Sobic006G230100 Sobic006G230100 Sobic004G187600--Sobic006G230100 Sobic006G171100 Sobic006G171100 Sobic009G136800--Sobic006G171100 Sobic002G391300 Sobic002G391300 Sobic009G136800--Sobic002G391300 Sobic005G226400 Sobic005G226400 Sobic009G136800--Sobic005G226400 Sobic010G010000 Sobic010G010000 Sobic009G136800--Sobic010G010000 Sobic002G063700 Sobic002G063700 Sobic009G136800--Sobic002G063700 Sobic010G128300 Sobic010G128300 Sobic009G136800--Sobic010G128300 Sobic006G047200 Sobic006G047200 Sobic009G136800--Sobic006G047200 Sobic002G392000 Sobic002G392000 Sobic009G136800--Sobic002G392000 Sobic002G289500 Sobic002G289500 Sobic009G136800--Sobic002G289500 Sobic006G121000 Sobic006G121000 Sobic003G317300--Sobic006G121000 Sobic005G069166 Sobic005G069166 Sobic003G317300--Sobic005G069166 Sobic007G015000 Sobic007G015000 Sobic003G317300--Sobic007G015000 Sobic003G317300--Sobic004G299500 Sobic003G317300--Sobic006G230100 Sobic002G178200 Sobic002G178200 Sobic003G317300--Sobic002G178200 Sobic008G105800 Sobic008G105800 Sobic003G317300--Sobic008G105800 Sobic001G293100 Sobic001G293100 Sobic003G317300--Sobic001G293100 Sobic003G317300--Sobic005G069332 Sobic008G099300 Sobic008G099300 Sobic008G099232--Sobic008G099300 Sobic005G226350 Sobic005G226350 Sobic008G099232--Sobic005G226350 Sobic008G099232--Sobic005G226400 Sobic005G217766 Sobic005G217766 Sobic008G099232--Sobic005G217766 Sobic008G099232--Sobic010G128300 Sobic008G099232--Sobic010G010000 Sobic006G059800 Sobic006G059800 Sobic008G099232--Sobic006G059800 Sobic002G111900 Sobic002G111900 Sobic008G099232--Sobic002G111900 Sobic001G506100 Sobic001G506100 Sobic008G099232--Sobic001G506100 Sobic005G069332--Sobic005G069166 Sobic005G069332--Sobic004G299500 Sobic005G069332--Sobic008G105800 Sobic005G069332--Sobic006G230100 Sobic007G202480 Sobic007G202480 Sobic005G069332--Sobic007G202480 Sobic005G069332--Sobic002G063700 Sobic009G055300 Sobic009G055300 Sobic005G069332--Sobic009G055300 Sobic005G069332--Sobic001G395900 Sobic006G230200 Sobic006G230200 Sobic005G069332--Sobic006G230200 Sobic002G029500 Sobic002G029500 Sobic007G064900--Sobic002G029500 Sobic010G242800 Sobic010G242800 Sobic007G064900--Sobic010G242800 Sobic008G033100 Sobic008G033100 Sobic007G064900--Sobic008G033100 Sobic005G097900 Sobic005G097900 Sobic007G064900--Sobic005G097900 Sobic005G182900 Sobic005G182900 Sobic007G064900--Sobic005G182900 Sobic005G110511 Sobic005G110511 Sobic007G064900--Sobic005G110511 Sobic002G019000 Sobic002G019000 Sobic007G064900--Sobic002G019000 Sobic001G415100 Sobic001G415100 Sobic007G064900--Sobic001G415100 Sobic005G065700 Sobic005G065700 Sobic007G064900--Sobic005G065700 Sobic007G148100--Sobic004G299500 Sobic007G148100--Sobic006G230100 Sobic007G212000 Sobic007G212000 Sobic007G148100--Sobic007G212000 Sobic006G229901 Sobic006G229901 Sobic007G148100--Sobic006G229901 Sobic007G148100--Sobic005G069166 Sobic007G148100--Sobic006G230200 Sobic007G148100--Sobic005G069332 Sobic007G148100--Sobic007G015000 Sobic001G153100 Sobic001G153100 Sobic007G148100--Sobic001G153100 Sobic004G080300--Sobic002G063700 Sobic004G080300--Sobic005G069332 Sobic004G080300--Sobic005G069166 Sobic004G080300--Sobic009G136800 Sobic004G080300--Sobic005G226400 Sobic004G080300--Sobic006G230100 Sobic004G080300--Sobic004G299500 Sobic004G080300--Sobic001G415100 Sobic004G080300--Sobic006G230200
Octagon: transcription factors


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