Gene annotation
Transcriptome id Sobic.007G148100.2,Sobic.007G148100.1
Synonym Sb07g022230, RPS3, RPM1
Functional annotation MLA6 protein, putative, expressed
UniProt A0A1B6PHW3 , A0A1B6PHW1
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF561
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os10g04110.1 : MLA6 protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK07708 , KQK07707 , KQK07706 , KQK15395 , KQK12069 , PNT71905 , KQK19987 , PNT73786 , PNT73784 , KQK07711
Barley HORVU7Hr1G100250.16 , HORVU7Hr1G100250.15 , HORVU7Hr1G100250.14 , HORVU7Hr1G100250.19 , HORVU7Hr1G100250.18 , HORVU6Hr1G090550.3 , HORVU6Hr1G090550.2 , HORVU6Hr1G090550.1 , HORVU6Hr1G090550.4 , HORVU7Hr1G100250.17 , HORVU7Hr1G100250.12 , HORVU7Hr1G100250.11 , HORVU7Hr1G100250.39 , HORVU7Hr1G100250.31 , HORVU7Hr1G100250.30 , HORVU7Hr1G100250.33 , HORVU7Hr1G100250.32 , HORVU7Hr1G100250.35 , HORVU7Hr1G100250.34 , HORVU7Hr1G100250.37 , HORVU7Hr1G100250.36 , HORVU1Hr1G005470.11 , HORVU7Hr1G100250.9 , HORVU7Hr1G100250.8 , HORVU7Hr1G100250.7 , HORVU7Hr1G100250.5 , HORVU7Hr1G100250.28 , HORVU7Hr1G100250.29 , HORVU7Hr1G100250.26 , HORVU7Hr1G100250.27 , HORVU7Hr1G100250.24 , HORVU7Hr1G100250.22 , HORVU7Hr1G100250.23 , HORVU7Hr1G100250.20 , HORVU7Hr1G100250.21 , HORVU6Hr1G090490.1 , HORVU7Hr1G100250.6 , HORVU7Hr1G100250.10 , HORVU7Hr1G100250.50 , HORVU5Hr1G123480.1 , HORVU1Hr1G005470.1 , HORVU1Hr1G005470.3 , HORVU1Hr1G005470.2 , HORVU1Hr1G005470.5 , HORVU1Hr1G005470.4 , HORVU1Hr1G005470.6 , HORVU1Hr1G005470.9 , HORVU7Hr1G100250.48 , HORVU7Hr1G100250.40 , HORVU7Hr1G100250.41 , HORVU7Hr1G100250.42 , HORVU7Hr1G100250.43 , HORVU7Hr1G100250.44 , HORVU7Hr1G100250.45 , HORVU7Hr1G100250.46 , HORVU7Hr1G100250.47 , HORVU6Hr1G090470.10 , HORVU6Hr1G090470.4 , HORVU6Hr1G090470.5 , HORVU6Hr1G090470.6 , HORVU6Hr1G090470.7 , HORVU6Hr1G090470.1 , HORVU6Hr1G090470.2 , HORVU6Hr1G090470.3 , HORVU6Hr1G090470.9 , HORVU1Hr1G005520.1 , HORVU7Hr1G100250.38
Wheat TraesCS6A02G389000 , TraesCS1B02G046500 , TraesCS1B02G045800 , TraesCS5B02G540800 , TraesCS6B02G428100 , TraesCS6B02G428100 , TraesCS6B02G428100 , TraesCS6B02G428000 , TraesCS6B02G428000 , TraesCS6B02G428000 , TraesCS6D02G373200 , TraesCS6B02G428300 , TraesCS5B02G565500 , TraesCS1B02G046000 , TraesCS6B02G428200 , TraesCS1A02G035900 , TraesCS5B02G541200 , TraesCS1B02G045900 , TraesCS1D02G037400 , TraesCS6D02G373000 , TraesCS6D02G373000 , TraesCS5D02G548200 , TraesCS5B02G539700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G299500 - -
2 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
3 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -
4 Sobic.006G229901 - -
5 Sobic.005G069166 - -
6 Sobic.006G230200 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
7 Sobic.005G069332 - -
8 Sobic.007G015000 methyltransferase domain containing protein, expressed -
9 Sobic.001G153100 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
10 Sobic.001G415100 terpene synthase, putative, expressed -
11 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.007G202480 - -
13 Sobic.001G272800 NBS-LRR disease resistance protein, putative, expressed -
14 Sobic.006G121000 purine permease, putative, expressed -
15 Sobic.002G178200 - -
16 Sobic.008G105800 cytochrome P450, putative, expressed -
17 Sobic.001G395900 Nicotianamine synthase 4("PubMedID : 26759170,PubMedID : 24597475")@nicotianamine synthase, putative, expressed K05953: nicotianamine synthase
18 Sobic.001G293100 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.005G097900 major facilitator superfamily antiporter, putative, expressed -
20 Sobic.002G063700 NB-ARC domain containing protein, expressed -


Gene co-expression network
sample Sobic007G148100 Sobic007G148100 Sobic004G299500 Sobic004G299500 Sobic007G148100--Sobic004G299500 Sobic006G230100 Sobic006G230100 Sobic007G148100--Sobic006G230100 Sobic007G212000 Sobic007G212000 Sobic007G148100--Sobic007G212000 Sobic006G229901 Sobic006G229901 Sobic007G148100--Sobic006G229901 Sobic005G069166 Sobic005G069166 Sobic007G148100--Sobic005G069166 Sobic006G230200 Sobic006G230200 Sobic007G148100--Sobic006G230200 Sobic005G069332 Sobic005G069332 Sobic007G148100--Sobic005G069332 Sobic007G015000 Sobic007G015000 Sobic007G148100--Sobic007G015000 Sobic001G153100 Sobic001G153100 Sobic007G148100--Sobic001G153100 Sobic004G299500--Sobic006G230100 Sobic001G395900 Sobic001G395900 Sobic004G299500--Sobic001G395900 Sobic007G202480 Sobic007G202480 Sobic004G299500--Sobic007G202480 Sobic004G299500--Sobic005G069166 Sobic004G299500--Sobic006G229901 Sobic004G299500--Sobic007G015000 Sobic004G299500--Sobic005G069332 Sobic004G299500--Sobic001G153100 Sobic008G058600 Sobic008G058600 Sobic004G299500--Sobic008G058600 Sobic006G230100--Sobic004G299500 Sobic006G230100--Sobic001G395900 Sobic006G230100--Sobic007G202480 Sobic006G230100--Sobic007G015000 Sobic006G230100--Sobic005G069166 Sobic009G055300 Sobic009G055300 Sobic006G230100--Sobic009G055300 Sobic006G230100--Sobic006G230200 Sobic006G230100--Sobic001G153100 Sobic006G230100--Sobic006G229901 Sobic007G212000--Sobic007G015000 Sobic007G212000--Sobic006G230100 Sobic008G105800 Sobic008G105800 Sobic007G212000--Sobic008G105800 Sobic005G216400 Sobic005G216400 Sobic007G212000--Sobic005G216400 Sobic006G121000 Sobic006G121000 Sobic007G212000--Sobic006G121000 Sobic007G212000--Sobic007G202480 Sobic007G212000--Sobic004G299500 Sobic005G060200 Sobic005G060200 Sobic007G212000--Sobic005G060200 Sobic001G181600 Sobic001G181600 Sobic007G212000--Sobic001G181600 Sobic006G229901--Sobic007G202480 Sobic006G229901--Sobic004G299500 Sobic003G045650 Sobic003G045650 Sobic006G229901--Sobic003G045650 Sobic006G229901--Sobic001G395900 Sobic006G229901--Sobic006G230100 Sobic006G229901--Sobic001G153100 Sobic006G229901--Sobic005G069166 Sobic006G229901--Sobic008G058600 Sobic006G229901--Sobic005G069332 Sobic005G069166--Sobic004G299500 Sobic005G069166--Sobic005G069332 Sobic005G069166--Sobic006G230100 Sobic005G069166--Sobic007G202480 Sobic005G069166--Sobic001G153100 Sobic005G069166--Sobic006G229901 Sobic005G069166--Sobic008G105800 Sobic005G069166--Sobic001G395900 Sobic005G069166--Sobic007G015000 Sobic006G230200--Sobic009G055300 Sobic006G230200--Sobic001G395900 Sobic006G230200--Sobic006G230100 Sobic006G230200--Sobic007G202480 Sobic006G230200--Sobic004G299500 Sobic006G230200--Sobic005G069332 Sobic006G230200--Sobic008G105800 Sobic006G230200--Sobic001G153100 Sobic006G230200--Sobic005G069166 Sobic005G069332--Sobic005G069166 Sobic005G069332--Sobic004G299500 Sobic005G069332--Sobic008G105800 Sobic005G069332--Sobic006G230100 Sobic005G069332--Sobic007G202480 Sobic002G063700 Sobic002G063700 Sobic005G069332--Sobic002G063700 Sobic005G069332--Sobic009G055300 Sobic005G069332--Sobic001G395900 Sobic005G069332--Sobic006G230200 Sobic007G015000--Sobic006G230100 Sobic007G015000--Sobic004G299500 Sobic001G293100 Sobic001G293100 Sobic007G015000--Sobic001G293100 Sobic001G415100 Sobic001G415100 Sobic007G015000--Sobic001G415100 Sobic007G015000--Sobic007G212000 Sobic005G097900 Sobic005G097900 Sobic007G015000--Sobic005G097900 Sobic007G015000--Sobic005G069166 Sobic007G015000--Sobic007G202480 Sobic007G015000--Sobic008G105800 Sobic001G153100--Sobic007G202480 Sobic001G153100--Sobic005G069166 Sobic001G153100--Sobic006G230100 Sobic001G153100--Sobic004G299500 Sobic001G153100--Sobic006G229901 Sobic001G153100--Sobic002G063700 Sobic001G153100--Sobic001G395900 Sobic001G153100--Sobic001G415100 Sobic002G289500 Sobic002G289500 Sobic001G153100--Sobic002G289500
Octagon: transcription factors


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