Gene annotation
| Transcriptome id | Sobic.002G342200.1 |
|---|---|
| Synonym | Sb02g036630 |
| Functional annotation | expressed protein |
| UniProt | C5XBN2 |
| Pfam | PF01582 |
| Panther DB | PTHR31008 PTHR31008:SF2 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0007165; signal transduction GO:0005515protein binding |
Orthologs (automatic annotation)
| TAIR | AT1G52900 : Toll-Interleukin-Resistance (TIR) domain family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os07g37950.1 : expressed protein |
| MaizeGDB (Corn) | Zm00025a048417 |
| Brachypodium | - |
| Barley | - |
| Wheat | TraesCS2A02G201700 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.009G168700 | ammonium transporter protein, putative, expressed | K03320: amt, AMT, ammonium transporter, Amt family |
| 2 | Sobic.004G048600 | coiled-coil domain-containing protein 72, putative, expressed | - |
| 3 | Sobic.006G178200 | GDSL-like lipase/acylhydrolase, putative, expressed | - |
| 4 | Sobic.009G147100 | auxin-induced protein 5NG4, putative, expressed | - |
| 5 | Sobic.003G291050 | - | - |
| 6 | Sobic.008G192100 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein | - |
| 7 | Sobic.004G019900 | GTP-binding protein, putative, expressed | - |
| 8 | Sobic.002G302400 | SAM dependent carboxyl methyltransferase, putative, expressed | - |
| 9 | Sobic.005G082950 | - | - |
| 10 | Sobic.007G024900 | OsWAK110 - OsWAK receptor-like protein kinase, expressed | - |
| 11 | Sobic.010G229200 | - | - |
| 12 | Sobic.001G084200 | UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed | - |
| 13 | Sobic.008G085600 | - | - |
| 14 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 15 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 16 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 17 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 18 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 19 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 20 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
Gene co-expression network
Octagon: transcription factors
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