Gene annotation
Transcriptome id Sobic.004G287000.1
Synonym Sb04g032280
Functional annotation rho-GTPase-activating protein-related, putative, expressed
UniProt C5Y1C2
Pfam PF13716
Panther DB PTHR11106 PTHR11106:SF58
NCBI CDD KOG2633; Hismacro and SEC14 domain-containing proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G35750 : SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
RAP-DB (Rice) LOC_Os02g44820.3 : rho-GTPase-activating protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a021462
Brachypodium -
Barley HORVU6Hr1G064500.2 , HORVU6Hr1G064500.1
Wheat TraesCS6A02G252900 , TraesCS6B02G273000 , TraesCS6D02G234400
Populus -


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cDNA sequences
Sobic.004G287000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G013600 WRKY46, expressed -
2 Sobic.008G050500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.002G235500 bZIP transcription factor domain containing protein, expressed -
4 Sobic.004G260300 expressed protein -
5 Sobic.001G021900 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
6 Sobic.006G149400 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
7 Sobic.003G288100 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
8 Sobic.010G213800 GDU1, putative, expressed -
9 Sobic.004G145900 expressed protein -
10 Sobic.009G248100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.009G231000 - -
12 Sobic.003G288000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
13 Sobic.009G229000 expressed protein -
14 Sobic.004G280000 Hydroxyjasmonate sulfotransferase (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
15 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
16 Sobic.001G139100 expressed protein -
17 Sobic.006G132800 expressed protein -
18 Sobic.001G169500 - -
19 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
20 Sobic.003G319500 receptor protein kinase, putative, expressed -


Gene co-expression network
sample Sobic004G287000 Sobic004G287000 Sobic005G013600 Sobic005G013600 Sobic004G287000--Sobic005G013600 Sobic008G050500 Sobic008G050500 Sobic004G287000--Sobic008G050500 Sobic002G235500 Sobic002G235500 Sobic004G287000--Sobic002G235500 Sobic004G260300 Sobic004G260300 Sobic004G287000--Sobic004G260300 Sobic001G021900 Sobic001G021900 Sobic004G287000--Sobic001G021900 Sobic006G149400 Sobic006G149400 Sobic004G287000--Sobic006G149400 Sobic003G288100 Sobic003G288100 Sobic004G287000--Sobic003G288100 Sobic010G213800 Sobic010G213800 Sobic004G287000--Sobic010G213800 Sobic004G145900 Sobic004G145900 Sobic004G287000--Sobic004G145900 Sobic009G217700 Sobic009G217700 Sobic005G013600--Sobic009G217700 Sobic001G449600 Sobic001G449600 Sobic005G013600--Sobic001G449600 Sobic009G139700 Sobic009G139700 Sobic005G013600--Sobic009G139700 Sobic007G005700 Sobic007G005700 Sobic005G013600--Sobic007G005700 Sobic003G255200 Sobic003G255200 Sobic005G013600--Sobic003G255200 Sobic007G166000 Sobic007G166000 Sobic005G013600--Sobic007G166000 Sobic003G364000 Sobic003G364000 Sobic005G013600--Sobic003G364000 Sobic005G005600 Sobic005G005600 Sobic005G013600--Sobic005G005600 Sobic003G202000 Sobic003G202000 Sobic005G013600--Sobic003G202000 Sobic009G065500 Sobic009G065500 Sobic008G050500--Sobic009G065500 Sobic009G164600 Sobic009G164600 Sobic008G050500--Sobic009G164600 Sobic001G325000 Sobic001G325000 Sobic008G050500--Sobic001G325000 Sobic001G481500 Sobic001G481500 Sobic008G050500--Sobic001G481500 Sobic010G032100 Sobic010G032100 Sobic008G050500--Sobic010G032100 Sobic001G397200 Sobic001G397200 Sobic008G050500--Sobic001G397200 Sobic008G050500--Sobic007G166000 Sobic004G336500 Sobic004G336500 Sobic008G050500--Sobic004G336500 Sobic004G166200 Sobic004G166200 Sobic008G050500--Sobic004G166200 Sobic010G239300 Sobic010G239300 Sobic002G235500--Sobic010G239300 Sobic001G317200 Sobic001G317200 Sobic002G235500--Sobic001G317200 Sobic002G415100 Sobic002G415100 Sobic002G235500--Sobic002G415100 Sobic006G099900 Sobic006G099900 Sobic002G235500--Sobic006G099900 Sobic002G235500--Sobic009G164600 Sobic002G235500--Sobic001G021900 Sobic002G235500--Sobic001G325000 Sobic003G252800 Sobic003G252800 Sobic002G235500--Sobic003G252800 Sobic007G141500 Sobic007G141500 Sobic002G235500--Sobic007G141500 Sobic005G103300 Sobic005G103300 Sobic004G260300--Sobic005G103300 Sobic001G389000 Sobic001G389000 Sobic004G260300--Sobic001G389000 Sobic005G103500 Sobic005G103500 Sobic004G260300--Sobic005G103500 Sobic001G097600 Sobic001G097600 Sobic004G260300--Sobic001G097600 Sobic009G035200 Sobic009G035200 Sobic004G260300--Sobic009G035200 Sobic001G115300 Sobic001G115300 Sobic004G260300--Sobic001G115300 Sobic009G159400 Sobic009G159400 Sobic004G260300--Sobic009G159400 Sobic001G119000 Sobic001G119000 Sobic004G260300--Sobic001G119000 Sobic009G111200 Sobic009G111200 Sobic004G260300--Sobic009G111200 Sobic001G021900--Sobic002G235500 Sobic003G117600 Sobic003G117600 Sobic001G021900--Sobic003G117600 Sobic003G139300 Sobic003G139300 Sobic001G021900--Sobic003G139300 Sobic001G325400 Sobic001G325400 Sobic001G021900--Sobic001G325400 Sobic001G021900--Sobic009G035200 Sobic010G185000 Sobic010G185000 Sobic001G021900--Sobic010G185000 Sobic001G021900--Sobic001G119000 Sobic001G082600 Sobic001G082600 Sobic001G021900--Sobic001G082600 Sobic006G092500 Sobic006G092500 Sobic001G021900--Sobic006G092500 Sobic006G249300 Sobic006G249300 Sobic006G149400--Sobic006G249300 Sobic006G046900 Sobic006G046900 Sobic006G149400--Sobic006G046900 Sobic001G169500 Sobic001G169500 Sobic006G149400--Sobic001G169500 Sobic003G394400 Sobic003G394400 Sobic006G149400--Sobic003G394400 Sobic006G230600 Sobic006G230600 Sobic006G149400--Sobic006G230600 Sobic006G149400--Sobic004G166200 Sobic010G198600 Sobic010G198600 Sobic006G149400--Sobic010G198600 Sobic006G149400--Sobic009G065500 Sobic002G068600 Sobic002G068600 Sobic006G149400--Sobic002G068600 Sobic003G382600 Sobic003G382600 Sobic003G288100--Sobic003G382600 Sobic001G018300 Sobic001G018300 Sobic003G288100--Sobic001G018300 Sobic002G192000 Sobic002G192000 Sobic003G288100--Sobic002G192000 Sobic001G231400 Sobic001G231400 Sobic003G288100--Sobic001G231400 Sobic001G318700 Sobic001G318700 Sobic003G288100--Sobic001G318700 Sobic003G369100 Sobic003G369100 Sobic003G288100--Sobic003G369100 Sobic004G243100 Sobic004G243100 Sobic003G288100--Sobic004G243100 Sobic001G140900 Sobic001G140900 Sobic003G288100--Sobic001G140900 Sobic008G050600 Sobic008G050600 Sobic003G288100--Sobic008G050600 Sobic003G367200 Sobic003G367200 Sobic010G213800--Sobic003G367200 Sobic002G224500 Sobic002G224500 Sobic010G213800--Sobic002G224500 Sobic010G213800--Sobic004G336500 Sobic001G112200 Sobic001G112200 Sobic010G213800--Sobic001G112200 Sobic002G389400 Sobic002G389400 Sobic010G213800--Sobic002G389400 Sobic002G261100 Sobic002G261100 Sobic010G213800--Sobic002G261100 Sobic010G213800--Sobic010G198600 Sobic009G200566 Sobic009G200566 Sobic010G213800--Sobic009G200566 Sobic001G279300 Sobic001G279300 Sobic010G213800--Sobic001G279300 Sobic001G310300 Sobic001G310300 Sobic004G145900--Sobic001G310300 Sobic003G311800 Sobic003G311800 Sobic004G145900--Sobic003G311800 Sobic010G008400 Sobic010G008400 Sobic004G145900--Sobic010G008400 Sobic009G232100 Sobic009G232100 Sobic004G145900--Sobic009G232100 Sobic001G049900 Sobic001G049900 Sobic004G145900--Sobic001G049900 Sobic009G109000 Sobic009G109000 Sobic004G145900--Sobic009G109000 Sobic010G085800 Sobic010G085800 Sobic004G145900--Sobic010G085800 Sobic002G003800 Sobic002G003800 Sobic004G145900--Sobic002G003800 Sobic004G310200 Sobic004G310200 Sobic004G145900--Sobic004G310200
Octagon: transcription factors


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