Gene annotation
Transcriptome id Sobic.004G260300.1
Synonym Sb04g029870
Functional annotation expressed protein
UniProt C5XZV9
Pfam -
Panther DB PTHR34055
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57930 : -
RAP-DB (Rice) LOC_Os02g48600.1 : expressed protein
MaizeGDB (Corn) Zm00025a032532 , Zm00025a021816
Brachypodium KQK18469
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G103300 dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
2 Sobic.001G389000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY55, expressed -
3 Sobic.005G103500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dehydrogenase, putative, expressed -
4 Sobic.001G097600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@"salidroside biosynthesis, ethanol degradation II, phytol degradation"(PubMedID : 21853065)@dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
5 Sobic.009G035200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
6 Sobic.001G115300 RNA recognition motif containing protein, putative, expressed -
7 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
8 Sobic.001G119000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.009G111200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
10 Sobic.003G357100 phosphatidic acid phosphatase-related, putative, expressed -
11 Sobic.009G248100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.002G202600 joka8, putative, expressed -
13 Sobic.009G179950 - -
14 Sobic.002G414600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hypoxia-responsive family protein, putative, expressed -
15 Sobic.003G387000 expressed protein -
16 Sobic.006G137800 expressed protein -
17 Sobic.001G139100 expressed protein -
18 Sobic.008G041400 amino acid permease family protein, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
19 Sobic.009G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
20 Sobic.009G229000 expressed protein -


Gene co-expression network
sample Sobic004G260300 Sobic004G260300 Sobic005G103300 Sobic005G103300 Sobic004G260300--Sobic005G103300 Sobic001G389000 Sobic001G389000 Sobic004G260300--Sobic001G389000 Sobic005G103500 Sobic005G103500 Sobic004G260300--Sobic005G103500 Sobic001G097600 Sobic001G097600 Sobic004G260300--Sobic001G097600 Sobic009G035200 Sobic009G035200 Sobic004G260300--Sobic009G035200 Sobic001G115300 Sobic001G115300 Sobic004G260300--Sobic001G115300 Sobic009G159400 Sobic009G159400 Sobic004G260300--Sobic009G159400 Sobic001G119000 Sobic001G119000 Sobic004G260300--Sobic001G119000 Sobic009G111200 Sobic009G111200 Sobic004G260300--Sobic009G111200 Sobic002G414600 Sobic002G414600 Sobic005G103300--Sobic002G414600 Sobic005G103300--Sobic005G103500 Sobic003G334600 Sobic003G334600 Sobic005G103300--Sobic003G334600 Sobic003G387000 Sobic003G387000 Sobic005G103300--Sobic003G387000 Sobic001G252300 Sobic001G252300 Sobic005G103300--Sobic001G252300 Sobic005G103300--Sobic001G097600 Sobic005G103300--Sobic001G119000 Sobic002G082600 Sobic002G082600 Sobic005G103300--Sobic002G082600 Sobic002G359300 Sobic002G359300 Sobic005G103300--Sobic002G359300 Sobic001G389000--Sobic009G159400 Sobic003G037800 Sobic003G037800 Sobic001G389000--Sobic003G037800 Sobic004G101300 Sobic004G101300 Sobic001G389000--Sobic004G101300 Sobic004G340900 Sobic004G340900 Sobic001G389000--Sobic004G340900 Sobic010G259600 Sobic010G259600 Sobic001G389000--Sobic010G259600 Sobic006G092500 Sobic006G092500 Sobic001G389000--Sobic006G092500 Sobic001G139100 Sobic001G139100 Sobic001G389000--Sobic001G139100 Sobic001G038900 Sobic001G038900 Sobic001G389000--Sobic001G038900 Sobic003G429000 Sobic003G429000 Sobic001G389000--Sobic003G429000 Sobic001G405500 Sobic001G405500 Sobic005G103500--Sobic001G405500 Sobic001G397200 Sobic001G397200 Sobic005G103500--Sobic001G397200 Sobic005G103500--Sobic005G103300 Sobic001G481600 Sobic001G481600 Sobic005G103500--Sobic001G481600 Sobic007G026600 Sobic007G026600 Sobic005G103500--Sobic007G026600 Sobic001G309600 Sobic001G309600 Sobic005G103500--Sobic001G309600 Sobic008G070350 Sobic008G070350 Sobic005G103500--Sobic008G070350 Sobic005G103500--Sobic003G387000 Sobic006G032700 Sobic006G032700 Sobic005G103500--Sobic006G032700 Sobic009G183400 Sobic009G183400 Sobic001G097600--Sobic009G183400 Sobic006G275200 Sobic006G275200 Sobic001G097600--Sobic006G275200 Sobic001G097600--Sobic002G414600 Sobic001G317000 Sobic001G317000 Sobic001G097600--Sobic001G317000 Sobic003G367200 Sobic003G367200 Sobic001G097600--Sobic003G367200 Sobic001G097600--Sobic001G038900 Sobic001G119400 Sobic001G119400 Sobic001G097600--Sobic001G119400 Sobic004G216600 Sobic004G216600 Sobic001G097600--Sobic004G216600 Sobic008G136400 Sobic008G136400 Sobic001G097600--Sobic008G136400 Sobic005G051200 Sobic005G051200 Sobic009G035200--Sobic005G051200 Sobic009G229000 Sobic009G229000 Sobic009G035200--Sobic009G229000 Sobic008G050600 Sobic008G050600 Sobic009G035200--Sobic008G050600 Sobic009G035200--Sobic002G414600 Sobic009G035200--Sobic008G136400 Sobic003G345100 Sobic003G345100 Sobic009G035200--Sobic003G345100 Sobic005G063100 Sobic005G063100 Sobic009G035200--Sobic005G063100 Sobic009G035200--Sobic006G092500 Sobic001G317200 Sobic001G317200 Sobic009G035200--Sobic001G317200 Sobic002G323300 Sobic002G323300 Sobic001G115300--Sobic002G323300 Sobic006G137800 Sobic006G137800 Sobic001G115300--Sobic006G137800 Sobic009G231000 Sobic009G231000 Sobic001G115300--Sobic009G231000 Sobic007G195800 Sobic007G195800 Sobic001G115300--Sobic007G195800 Sobic002G366600 Sobic002G366600 Sobic001G115300--Sobic002G366600 Sobic002G389400 Sobic002G389400 Sobic001G115300--Sobic002G389400 Sobic003G357100 Sobic003G357100 Sobic001G115300--Sobic003G357100 Sobic002G329800 Sobic002G329800 Sobic001G115300--Sobic002G329800 Sobic001G115300--Sobic003G367200 Sobic009G159400--Sobic001G038900 Sobic001G435000 Sobic001G435000 Sobic009G159400--Sobic001G435000 Sobic004G321300 Sobic004G321300 Sobic009G159400--Sobic004G321300 Sobic009G159400--Sobic003G345100 Sobic004G208700 Sobic004G208700 Sobic009G159400--Sobic004G208700 Sobic001G140900 Sobic001G140900 Sobic009G159400--Sobic001G140900 Sobic009G159400--Sobic008G050600 Sobic009G159400--Sobic010G259600 Sobic004G237800 Sobic004G237800 Sobic009G159400--Sobic004G237800 Sobic001G119100 Sobic001G119100 Sobic001G119000--Sobic001G119100 Sobic005G091500 Sobic005G091500 Sobic001G119000--Sobic005G091500 Sobic002G183200 Sobic002G183200 Sobic001G119000--Sobic002G183200 Sobic002G245100 Sobic002G245100 Sobic001G119000--Sobic002G245100 Sobic001G119000--Sobic001G252300 Sobic002G055600 Sobic002G055600 Sobic001G119000--Sobic002G055600 Sobic004G189400 Sobic004G189400 Sobic001G119000--Sobic004G189400 Sobic004G166700 Sobic004G166700 Sobic001G119000--Sobic004G166700 Sobic001G119000--Sobic001G389000 Sobic006G190500 Sobic006G190500 Sobic009G111200--Sobic006G190500 Sobic002G415600 Sobic002G415600 Sobic009G111200--Sobic002G415600 Sobic006G230800 Sobic006G230800 Sobic009G111200--Sobic006G230800 Sobic009G111200--Sobic001G481600 Sobic003G123600 Sobic003G123600 Sobic009G111200--Sobic003G123600 Sobic005G010200 Sobic005G010200 Sobic009G111200--Sobic005G010200 Sobic006G231200 Sobic006G231200 Sobic009G111200--Sobic006G231200 Sobic009G111200--Sobic005G103500 Sobic010G217800 Sobic010G217800 Sobic009G111200--Sobic010G217800
Octagon: transcription factors


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