Gene annotation
Transcriptome id Sobic.009G179950.3,Sobic.009G179950.2,Sobic.009G179950.1,Sobic.009G179950.4
Synonym -
Functional annotation -
UniProt A0A1Z5R385
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G009500 - -
2 Sobic.001G389000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY55, expressed -
3 Sobic.009G179900 OsCML9 - Calmodulin-related calcium sensor protein, expressed K02183: calmodulin
4 Sobic.003G343900 expressed protein -
5 Sobic.008G106700 isoflavone reductase, putative, expressed -
6 Sobic.009G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
7 Sobic.004G061200 expressed protein -
8 Sobic.001G097600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@"salidroside biosynthesis, ethanol degradation II, phytol degradation"(PubMedID : 21853065)@dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
9 Sobic.005G093000 - -
10 Sobic.010G262200 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
11 Sobic.005G084600 ARGOS, putative, expressed -
12 Sobic.001G476500 helix-loop-helix DNA-binding protein, putative, expressed -
13 Sobic.006G044100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
14 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.004G340900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX70 - F-box domain containing protein, expressed -
16 Sobic.002G329000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-ld.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
17 Sobic.005G103300 dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
18 Sobic.002G034800 - -
19 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
20 Sobic.001G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD dependent epimerase/dehydratase family protein, putative, expressed K10046: GDP-D-mannose 3', 5'-epimerase


Gene co-expression network
sample Sobic009G179950 Sobic009G179950 Sobic001G009500 Sobic001G009500 Sobic009G179950--Sobic001G009500 Sobic001G389000 Sobic001G389000 Sobic009G179950--Sobic001G389000 Sobic009G179900 Sobic009G179900 Sobic009G179950--Sobic009G179900 Sobic003G343900 Sobic003G343900 Sobic009G179950--Sobic003G343900 Sobic008G106700 Sobic008G106700 Sobic009G179950--Sobic008G106700 Sobic009G183400 Sobic009G183400 Sobic009G179950--Sobic009G183400 Sobic004G061200 Sobic004G061200 Sobic009G179950--Sobic004G061200 Sobic001G097600 Sobic001G097600 Sobic009G179950--Sobic001G097600 Sobic005G093000 Sobic005G093000 Sobic009G179950--Sobic005G093000 Sobic001G247600 Sobic001G247600 Sobic001G009500--Sobic001G247600 Sobic001G009500--Sobic008G106700 Sobic001G009500--Sobic003G343900 Sobic001G009500--Sobic001G389000 Sobic009G074100 Sobic009G074100 Sobic001G009500--Sobic009G074100 Sobic001G119400 Sobic001G119400 Sobic001G009500--Sobic001G119400 Sobic004G100700 Sobic004G100700 Sobic001G009500--Sobic004G100700 Sobic004G075000 Sobic004G075000 Sobic001G009500--Sobic004G075000 Sobic008G186100 Sobic008G186100 Sobic001G009500--Sobic008G186100 Sobic009G159400 Sobic009G159400 Sobic001G389000--Sobic009G159400 Sobic003G037800 Sobic003G037800 Sobic001G389000--Sobic003G037800 Sobic004G101300 Sobic004G101300 Sobic001G389000--Sobic004G101300 Sobic004G340900 Sobic004G340900 Sobic001G389000--Sobic004G340900 Sobic010G259600 Sobic010G259600 Sobic001G389000--Sobic010G259600 Sobic006G092500 Sobic006G092500 Sobic001G389000--Sobic006G092500 Sobic001G139100 Sobic001G139100 Sobic001G389000--Sobic001G139100 Sobic001G038900 Sobic001G038900 Sobic001G389000--Sobic001G038900 Sobic003G429000 Sobic003G429000 Sobic001G389000--Sobic003G429000 Sobic009G179900--Sobic008G106700 Sobic003G062600 Sobic003G062600 Sobic009G179900--Sobic003G062600 Sobic003G255200 Sobic003G255200 Sobic009G179900--Sobic003G255200 Sobic006G044100 Sobic006G044100 Sobic009G179900--Sobic006G044100 Sobic004G176600 Sobic004G176600 Sobic009G179900--Sobic004G176600 Sobic001G082600 Sobic001G082600 Sobic009G179900--Sobic001G082600 Sobic004G046200 Sobic004G046200 Sobic009G179900--Sobic004G046200 Sobic002G034800 Sobic002G034800 Sobic009G179900--Sobic002G034800 Sobic003G417800 Sobic003G417800 Sobic009G179900--Sobic003G417800 Sobic001G494000 Sobic001G494000 Sobic003G343900--Sobic001G494000 Sobic003G343900--Sobic001G009500 Sobic010G252500 Sobic010G252500 Sobic003G343900--Sobic010G252500 Sobic003G343900--Sobic001G389000 Sobic003G343900--Sobic008G106700 Sobic003G343900--Sobic009G179900 Sobic003G343900--Sobic005G093000 Sobic003G343900--Sobic003G429000 Sobic003G417350 Sobic003G417350 Sobic003G343900--Sobic003G417350 Sobic008G106700--Sobic004G046200 Sobic001G500000 Sobic001G500000 Sobic008G106700--Sobic001G500000 Sobic008G106700--Sobic006G044100 Sobic003G084400 Sobic003G084400 Sobic008G106700--Sobic003G084400 Sobic003G079400 Sobic003G079400 Sobic008G106700--Sobic003G079400 Sobic008G106700--Sobic009G183400 Sobic008G106700--Sobic009G179900 Sobic008G106700--Sobic001G139100 Sobic006G199800 Sobic006G199800 Sobic008G106700--Sobic006G199800 Sobic001G476500 Sobic001G476500 Sobic009G183400--Sobic001G476500 Sobic009G183400--Sobic001G119400 Sobic009G183400--Sobic006G092500 Sobic009G183400--Sobic001G038900 Sobic009G183400--Sobic001G097600 Sobic009G061200 Sobic009G061200 Sobic009G183400--Sobic009G061200 Sobic002G414600 Sobic002G414600 Sobic009G183400--Sobic002G414600 Sobic009G183400--Sobic004G100700 Sobic001G140900 Sobic001G140900 Sobic009G183400--Sobic001G140900 Sobic004G321300 Sobic004G321300 Sobic004G061200--Sobic004G321300 Sobic002G393000 Sobic002G393000 Sobic004G061200--Sobic002G393000 Sobic004G061200--Sobic001G038900 Sobic003G393700 Sobic003G393700 Sobic004G061200--Sobic003G393700 Sobic004G061200--Sobic009G159400 Sobic010G086200 Sobic010G086200 Sobic004G061200--Sobic010G086200 Sobic008G136400 Sobic008G136400 Sobic004G061200--Sobic008G136400 Sobic009G143400 Sobic009G143400 Sobic004G061200--Sobic009G143400 Sobic002G046100 Sobic002G046100 Sobic004G061200--Sobic002G046100 Sobic001G097600--Sobic009G183400 Sobic006G275200 Sobic006G275200 Sobic001G097600--Sobic006G275200 Sobic001G097600--Sobic002G414600 Sobic001G317000 Sobic001G317000 Sobic001G097600--Sobic001G317000 Sobic003G367200 Sobic003G367200 Sobic001G097600--Sobic003G367200 Sobic001G097600--Sobic001G038900 Sobic001G097600--Sobic001G119400 Sobic004G216600 Sobic004G216600 Sobic001G097600--Sobic004G216600 Sobic001G097600--Sobic008G136400 Sobic002G329000 Sobic002G329000 Sobic005G093000--Sobic002G329000 Sobic005G093000--Sobic001G389000 Sobic010G136000 Sobic010G136000 Sobic005G093000--Sobic010G136000 Sobic010G195500 Sobic010G195500 Sobic005G093000--Sobic010G195500 Sobic010G268400 Sobic010G268400 Sobic005G093000--Sobic010G268400 Sobic005G093000--Sobic003G429000 Sobic005G018700 Sobic005G018700 Sobic005G093000--Sobic005G018700 Sobic005G093000--Sobic001G500000 Sobic005G093000--Sobic009G074100
Octagon: transcription factors


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