Gene annotation
Transcriptome id Sobic.003G288000.1
Synonym UGT88A1, Sb03g033870
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
anthocyanidin 5,3-O-glucosyltransferase, putative, expressed
UniProt C5XJ52
Pfam PF00201
Panther DB PTHR11926 PTHR11926:SF278
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016758; transferase activity, transferring hexosyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G16520 : UDP-glucosyl transferase 88A1
RAP-DB (Rice) LOC_Os01g53430.1 : anthocyanidin 5,3-O-glucosyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a040089 , Zm00025a019840
Brachypodium KQK05281 , PNT70855 , KQK09609 , KQK09610
Barley HORVU7Hr1G042890.2 , HORVU7Hr1G115260.1 , HORVU1Hr1G081920.5 , HORVU7Hr1G042910.1 , HORVU7Hr1G042890.4 , HORVU7Hr1G042890.5 , HORVU3Hr1G069830.1 , HORVU7Hr1G042890.1 , HORVU7Hr1G042890.3
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.003G288000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G297600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor 2, putative, expressed -
2 Sobic.005G051200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
3 Sobic.001G252300 pectinesterase, putative, expressed K01051: pectinesterase
4 Sobic.009G229000 expressed protein -
5 Sobic.002G261000 expressed protein -
6 Sobic.002G416600 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.009G035200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
9 Sobic.008G050600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
10 Sobic.004G166700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Beta-fructofuranosidase, cell wall Invertase 2 (Os)"(PubMedID : 27208977)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
11 Sobic.003G345100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
12 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease
13 Sobic.009G164600 ZOS1-14 - C2H2 zinc finger protein, expressed -
14 Sobic.004G061200 expressed protein -
15 Sobic.003G087300 nuclease PA3, putative, expressed -
16 Sobic.007G141500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
17 Sobic.005G063100 expressed protein -
18 Sobic.002G414600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hypoxia-responsive family protein, putative, expressed -
19 Sobic.009G139400 expressed protein -
20 Sobic.001G325000 expressed protein -


Gene co-expression network
sample Sobic003G288000 Sobic003G288000 Sobic003G297600 Sobic003G297600 Sobic003G288000--Sobic003G297600 Sobic005G051200 Sobic005G051200 Sobic003G288000--Sobic005G051200 Sobic001G252300 Sobic001G252300 Sobic003G288000--Sobic001G252300 Sobic009G229000 Sobic009G229000 Sobic003G288000--Sobic009G229000 Sobic002G261000 Sobic002G261000 Sobic003G288000--Sobic002G261000 Sobic002G416600 Sobic002G416600 Sobic003G288000--Sobic002G416600 Sobic001G317200 Sobic001G317200 Sobic003G288000--Sobic001G317200 Sobic009G035200 Sobic009G035200 Sobic003G288000--Sobic009G035200 Sobic008G050600 Sobic008G050600 Sobic003G288000--Sobic008G050600 Sobic009G077800 Sobic009G077800 Sobic003G297600--Sobic009G077800 Sobic009G139400 Sobic009G139400 Sobic003G297600--Sobic009G139400 Sobic001G070800 Sobic001G070800 Sobic003G297600--Sobic001G070800 Sobic005G029200 Sobic005G029200 Sobic003G297600--Sobic005G029200 Sobic004G189400 Sobic004G189400 Sobic003G297600--Sobic004G189400 Sobic003G297600--Sobic008G050600 Sobic003G297600--Sobic001G317200 Sobic005G091500 Sobic005G091500 Sobic003G297600--Sobic005G091500 Sobic002G055700 Sobic002G055700 Sobic003G297600--Sobic002G055700 Sobic005G051200--Sobic001G317200 Sobic005G051200--Sobic009G035200 Sobic005G051200--Sobic008G050600 Sobic005G051200--Sobic002G416600 Sobic009G164600 Sobic009G164600 Sobic005G051200--Sobic009G164600 Sobic003G345100 Sobic003G345100 Sobic005G051200--Sobic003G345100 Sobic003G286600 Sobic003G286600 Sobic005G051200--Sobic003G286600 Sobic005G063100 Sobic005G063100 Sobic005G051200--Sobic005G063100 Sobic005G051200--Sobic001G252300 Sobic002G414600 Sobic002G414600 Sobic001G252300--Sobic002G414600 Sobic004G166700 Sobic004G166700 Sobic001G252300--Sobic004G166700 Sobic001G252300--Sobic005G051200 Sobic004G208700 Sobic004G208700 Sobic001G252300--Sobic004G208700 Sobic001G252300--Sobic001G317200 Sobic001G252300--Sobic003G297600 Sobic001G252300--Sobic002G416600 Sobic001G252300--Sobic008G050600 Sobic001G252300--Sobic003G286600 Sobic009G229000--Sobic004G166700 Sobic006G092500 Sobic006G092500 Sobic009G229000--Sobic006G092500 Sobic001G139100 Sobic001G139100 Sobic009G229000--Sobic001G139100 Sobic009G229000--Sobic009G035200 Sobic009G229000--Sobic005G051200 Sobic009G229000--Sobic003G345100 Sobic001G169500 Sobic001G169500 Sobic009G229000--Sobic001G169500 Sobic010G259600 Sobic010G259600 Sobic009G229000--Sobic010G259600 Sobic009G229000--Sobic005G063100 Sobic001G317000 Sobic001G317000 Sobic002G261000--Sobic001G317000 Sobic006G275200 Sobic006G275200 Sobic002G261000--Sobic006G275200 Sobic001G119400 Sobic001G119400 Sobic002G261000--Sobic001G119400 Sobic004G216600 Sobic004G216600 Sobic002G261000--Sobic004G216600 Sobic009G008900 Sobic009G008900 Sobic002G261000--Sobic009G008900 Sobic001G097600 Sobic001G097600 Sobic002G261000--Sobic001G097600 Sobic001G319600 Sobic001G319600 Sobic002G261000--Sobic001G319600 Sobic002G261000--Sobic003G297600 Sobic002G261000--Sobic001G317200 Sobic003G087300 Sobic003G087300 Sobic002G416600--Sobic003G087300 Sobic002G416600--Sobic005G051200 Sobic002G416600--Sobic001G317200 Sobic001G025300 Sobic001G025300 Sobic002G416600--Sobic001G025300 Sobic002G416600--Sobic001G070800 Sobic002G416600--Sobic004G166700 Sobic002G416600--Sobic008G050600 Sobic002G416600--Sobic001G252300 Sobic010G239300 Sobic010G239300 Sobic002G416600--Sobic010G239300 Sobic001G317200--Sobic005G051200 Sobic006G099900 Sobic006G099900 Sobic001G317200--Sobic006G099900 Sobic003G252800 Sobic003G252800 Sobic001G317200--Sobic003G252800 Sobic010G084400 Sobic010G084400 Sobic001G317200--Sobic010G084400 Sobic001G317200--Sobic003G286600 Sobic001G317200--Sobic008G050600 Sobic003G240600 Sobic003G240600 Sobic001G317200--Sobic003G240600 Sobic005G101800 Sobic005G101800 Sobic001G317200--Sobic005G101800 Sobic001G317200--Sobic002G416600 Sobic009G035200--Sobic005G051200 Sobic009G035200--Sobic009G229000 Sobic009G035200--Sobic008G050600 Sobic009G035200--Sobic002G414600 Sobic008G136400 Sobic008G136400 Sobic009G035200--Sobic008G136400 Sobic009G035200--Sobic003G345100 Sobic009G035200--Sobic005G063100 Sobic009G035200--Sobic006G092500 Sobic009G035200--Sobic001G317200 Sobic008G050600--Sobic003G345100 Sobic001G140900 Sobic001G140900 Sobic008G050600--Sobic001G140900 Sobic008G050600--Sobic005G063100 Sobic008G050600--Sobic003G286600 Sobic008G050600--Sobic009G164600 Sobic001G038900 Sobic001G038900 Sobic008G050600--Sobic001G038900 Sobic008G050600--Sobic008G136400 Sobic008G050600--Sobic004G189400 Sobic008G050600--Sobic005G051200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.