Gene annotation
Transcriptome id Sobic.003G337400.1
Synonym C4H, CYP73A5, REF3, Sb03g038160, ATC4H
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Up-reguralion under heat (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
cytochrome P450, putative, expressed
UniProt C5XN98
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF56
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology K00487; trans-cinnamate 4-monooxygenase
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT2G30490 : cinnamate-4-hydroxylase
RAP-DB (Rice) LOC_Os01g60450.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a039769 , Zm00025a036914 , Zm00025a043283 , Zm00025a020303
Brachypodium KQK10342 , KQJ99419 , KQK06925
Barley HORVU7Hr1G093630.2 , HORVU7Hr1G093630.3 , HORVU7Hr1G093630.1 , HORVU3Hr1G025920.8 , HORVU3Hr1G025920.7 , HORVU3Hr1G025920.6 , HORVU3Hr1G025920.5 , HORVU3Hr1G025920.4 , HORVU3Hr1G025920.3 , HORVU3Hr1G025920.2 , HORVU3Hr1G025920.1 , HORVU4Hr1G087630.5 , HORVU4Hr1G087630.6 , HORVU4Hr1G087630.7 , HORVU4Hr1G087630.1 , HORVU4Hr1G087630.2 , HORVU4Hr1G087630.3 , HORVU3Hr1G080830.4 , HORVU3Hr1G080830.1 , HORVU3Hr1G080830.2 , HORVU3Hr1G080830.3
Wheat TraesCS7A02G398900 , TraesCS7A02G398900 , TraesCS4B02G365100 , TraesCS3B02G375100 , TraesCS3A02G342900 , TraesCS3D02G336900 , TraesCS3D02G136900 , TraesCS3B02G154000 , TraesCS2D02G300200 , TraesCS3D02G336900 , TraesCS2B02G317700 , TraesCSU02G138300 , TraesCS5A02G534000 , TraesCS3A02G136100
Populus -


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cDNA sequences
Sobic.003G337400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G303433 - K02950: RP-S12, MRPS12, small subunit ribosomal protein S12
2 Sobic.005G036450 - -
3 Sobic.003G159101 - -
4 Sobic.005G021400 - -
5 Sobic.004G334601 - -
6 Sobic.001G535850 - -
7 Sobic.005G184900 - -
8 Sobic.003G120900 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.001G450900 UNE2, putative, expressed -
10 Sobic.001G394532 - K02110: ATPF0C, F-type H+-transporting ATPase subunit c
11 Sobic.003G286450 - -
12 Sobic.005G139900 chloroplast 30S ribosomal protein S7, putative, expressed K02992: RP-S7, MRPS7, small subunit ribosomal protein S7
13 Sobic.001G154000 plastocyanin-like domain containing protein, putative, expressed -
14 Sobic.002G387450 - -
15 Sobic.003G173116 - K02724: photosystem II PsbZ protein
16 Sobic.010G176000 - -
17 Sobic.001G066800 serpin domain containing protein, putative, expressed K13963: serpin B
18 Sobic.007G054200 harpin-induced protein 1 domain containing protein, expressed -
19 Sobic.009G174150 - -
20 Sobic.004G015600 - -


Gene co-expression network
sample Sobic003G337400 Sobic003G337400 Sobic004G303433 Sobic004G303433 Sobic003G337400--Sobic004G303433 Sobic005G036450 Sobic005G036450 Sobic003G337400--Sobic005G036450 Sobic003G159101 Sobic003G159101 Sobic003G337400--Sobic003G159101 Sobic005G021400 Sobic005G021400 Sobic003G337400--Sobic005G021400 Sobic004G334601 Sobic004G334601 Sobic003G337400--Sobic004G334601 Sobic001G535850 Sobic001G535850 Sobic003G337400--Sobic001G535850 Sobic005G184900 Sobic005G184900 Sobic003G337400--Sobic005G184900 Sobic003G120900 Sobic003G120900 Sobic003G337400--Sobic003G120900 Sobic001G450900 Sobic001G450900 Sobic003G337400--Sobic001G450900 Sobic005G139900 Sobic005G139900 Sobic004G303433--Sobic005G139900 Sobic004G303433--Sobic001G535850 Sobic004G303433--Sobic003G159101 Sobic001G394532 Sobic001G394532 Sobic004G303433--Sobic001G394532 Sobic004G303433--Sobic005G036450 Sobic004G303433--Sobic005G184900 Sobic003G286450 Sobic003G286450 Sobic004G303433--Sobic003G286450 Sobic003G169200 Sobic003G169200 Sobic004G303433--Sobic003G169200 Sobic003G173116 Sobic003G173116 Sobic004G303433--Sobic003G173116 Sobic005G036450--Sobic003G159101 Sobic005G036450--Sobic004G303433 Sobic005G036450--Sobic003G173116 Sobic005G036450--Sobic005G139900 Sobic005G036450--Sobic003G169200 Sobic005G036450--Sobic001G535850 Sobic005G036450--Sobic001G394532 Sobic009G174150 Sobic009G174150 Sobic005G036450--Sobic009G174150 Sobic001G230050 Sobic001G230050 Sobic005G036450--Sobic001G230050 Sobic003G159101--Sobic003G173116 Sobic003G159101--Sobic005G036450 Sobic003G159101--Sobic003G169200 Sobic003G159101--Sobic005G139900 Sobic003G159101--Sobic004G303433 Sobic003G159101--Sobic001G230050 Sobic003G159101--Sobic009G174150 Sobic003G159101--Sobic001G535850 Sobic003G053100 Sobic003G053100 Sobic003G159101--Sobic003G053100 Sobic010G176000 Sobic010G176000 Sobic005G021400--Sobic010G176000 Sobic009G204501 Sobic009G204501 Sobic005G021400--Sobic009G204501 Sobic007G116300 Sobic007G116300 Sobic005G021400--Sobic007G116300 Sobic005G021400--Sobic003G286450 Sobic001G093400 Sobic001G093400 Sobic005G021400--Sobic001G093400 Sobic001G255866 Sobic001G255866 Sobic005G021400--Sobic001G255866 Sobic010G053700 Sobic010G053700 Sobic005G021400--Sobic010G053700 Sobic005G021400--Sobic001G535850 Sobic001G420150 Sobic001G420150 Sobic005G021400--Sobic001G420150 Sobic003G168700 Sobic003G168700 Sobic004G334601--Sobic003G168700 Sobic004G334601--Sobic004G303433 Sobic008G156800 Sobic008G156800 Sobic004G334601--Sobic008G156800 Sobic003G394701 Sobic003G394701 Sobic004G334601--Sobic003G394701 Sobic004G334601--Sobic010G176000 Sobic001G205950 Sobic001G205950 Sobic004G334601--Sobic001G205950 Sobic002G042700 Sobic002G042700 Sobic004G334601--Sobic002G042700 Sobic007G054200 Sobic007G054200 Sobic004G334601--Sobic007G054200 Sobic007G046700 Sobic007G046700 Sobic004G334601--Sobic007G046700 Sobic001G535850--Sobic003G286450 Sobic001G535850--Sobic005G139900 Sobic001G535850--Sobic004G303433 Sobic001G535850--Sobic003G173116 Sobic001G535850--Sobic001G394532 Sobic010G206600 Sobic010G206600 Sobic001G535850--Sobic010G206600 Sobic005G139750 Sobic005G139750 Sobic001G535850--Sobic005G139750 Sobic001G154000 Sobic001G154000 Sobic001G535850--Sobic001G154000 Sobic005G104900 Sobic005G104900 Sobic001G535850--Sobic005G104900 Sobic005G184900--Sobic001G394532 Sobic005G184900--Sobic004G303433 Sobic005G184900--Sobic010G206600 Sobic005G184900--Sobic003G169200 Sobic005G184900--Sobic005G139900 Sobic001G530201 Sobic001G530201 Sobic005G184900--Sobic001G530201 Sobic005G184900--Sobic003G159101 Sobic005G184900--Sobic001G535850 Sobic005G184900--Sobic001G230050 Sobic003G120900--Sobic005G021400 Sobic003G120900--Sobic007G054200 Sobic003G120900--Sobic004G303433 Sobic003G120900--Sobic001G535850 Sobic009G058900 Sobic009G058900 Sobic003G120900--Sobic009G058900 Sobic009G257000 Sobic009G257000 Sobic003G120900--Sobic009G257000 Sobic010G196900 Sobic010G196900 Sobic003G120900--Sobic010G196900 Sobic003G120900--Sobic001G093400 Sobic004G129400 Sobic004G129400 Sobic003G120900--Sobic004G129400 Sobic004G019550 Sobic004G019550 Sobic001G450900--Sobic004G019550 Sobic001G450900--Sobic001G154000 Sobic010G035600 Sobic010G035600 Sobic001G450900--Sobic010G035600 Sobic001G450900--Sobic003G286450 Sobic001G476800 Sobic001G476800 Sobic001G450900--Sobic001G476800 Sobic001G450900--Sobic001G535850 Sobic007G065000 Sobic007G065000 Sobic001G450900--Sobic007G065000 Sobic001G450900--Sobic005G139750 Sobic008G171200 Sobic008G171200 Sobic001G450900--Sobic008G171200
Octagon: transcription factors


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