Gene annotation
Transcriptome id Sobic.006G093700.1
Synonym
Functional annotation GRAS family transcription factor domain containing protein, expressed
UniProt A0A1B6PL35
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF27
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G29060 : GRAS family transcription factor
RAP-DB (Rice) LOC_Os11g47890.1 : GRAS family transcription factor domain containing protein, expressed
MaizeGDB (Corn) Zm00025a029079 , Zm00025a011229
Brachypodium -
Barley -
Wheat TraesCS4B02G140800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G238000 - -
2 Sobic.003G325100 NB-ARC domain containing protein, expressed -
3 Sobic.004G065950 - -
4 Sobic.004G269300 - -
5 Sobic.010G276301 - -
6 Sobic.008G068700 DUF1336 domain containing protein, expressed -
7 Sobic.004G201000 phytosulfokine receptor precursor, putative, expressed -
8 Sobic.010G155401 - -
9 Sobic.004G290850 - -
10 Sobic.002G427600 hypothetical protein -
11 Sobic.010G126700 expressed protein -
12 Sobic.007G220033 - -
13 Sobic.001G273875 - -
14 Sobic.003G125751 - -
15 Sobic.003G277550 - -
16 Sobic.007G212250 - -
17 Sobic.010G102700 alpha/beta hydrolase fold, putative, expressed -
18 Sobic.003G116850 - -
19 Sobic.001G148000 a WRKY transcription factor which regulates cell wall biosynthesis genes. Seed shattering-related gene.(PubMedID : 24019506)@WRKY60, expressed -
20 Sobic.004G138400 WRKY51, expressed -


Gene co-expression network
sample Sobic006G093700 Sobic006G093700 Sobic010G238000 Sobic010G238000 Sobic006G093700--Sobic010G238000 Sobic003G325100 Sobic003G325100 Sobic006G093700--Sobic003G325100 Sobic004G065950 Sobic004G065950 Sobic006G093700--Sobic004G065950 Sobic004G269300 Sobic004G269300 Sobic006G093700--Sobic004G269300 Sobic010G276301 Sobic010G276301 Sobic006G093700--Sobic010G276301 Sobic008G068700 Sobic008G068700 Sobic006G093700--Sobic008G068700 Sobic004G201000 Sobic004G201000 Sobic006G093700--Sobic004G201000 Sobic010G155401 Sobic010G155401 Sobic006G093700--Sobic010G155401 Sobic004G290850 Sobic004G290850 Sobic006G093700--Sobic004G290850 Sobic001G472050 Sobic001G472050 Sobic010G238000--Sobic001G472050 Sobic001G489550 Sobic001G489550 Sobic010G238000--Sobic001G489550 Sobic010G238000--Sobic004G269300 Sobic002G423901 Sobic002G423901 Sobic010G238000--Sobic002G423901 Sobic002G245700 Sobic002G245700 Sobic010G238000--Sobic002G245700 Sobic010G102700 Sobic010G102700 Sobic010G238000--Sobic010G102700 Sobic004G169401 Sobic004G169401 Sobic010G238000--Sobic004G169401 Sobic010G008433 Sobic010G008433 Sobic010G238000--Sobic010G008433 Sobic007G199901 Sobic007G199901 Sobic010G238000--Sobic007G199901 Sobic004G138400 Sobic004G138400 Sobic003G325100--Sobic004G138400 Sobic002G202800 Sobic002G202800 Sobic003G325100--Sobic002G202800 Sobic010G004500 Sobic010G004500 Sobic003G325100--Sobic010G004500 Sobic002G064200 Sobic002G064200 Sobic003G325100--Sobic002G064200 Sobic008G095100 Sobic008G095100 Sobic003G325100--Sobic008G095100 Sobic009G111800 Sobic009G111800 Sobic003G325100--Sobic009G111800 Sobic003G242800 Sobic003G242800 Sobic003G325100--Sobic003G242800 Sobic004G106200 Sobic004G106200 Sobic003G325100--Sobic004G106200 Sobic001G059300 Sobic001G059300 Sobic003G325100--Sobic001G059300 Sobic004G065950--Sobic004G201000 Sobic004G065950--Sobic010G155401 Sobic001G273875 Sobic001G273875 Sobic004G065950--Sobic001G273875 Sobic003G125751 Sobic003G125751 Sobic004G065950--Sobic003G125751 Sobic004G065950--Sobic004G290850 Sobic002G427600 Sobic002G427600 Sobic004G065950--Sobic002G427600 Sobic006G011450 Sobic006G011450 Sobic004G065950--Sobic006G011450 Sobic007G220033 Sobic007G220033 Sobic004G065950--Sobic007G220033 Sobic010G023650 Sobic010G023650 Sobic004G065950--Sobic010G023650 Sobic004G269300--Sobic010G238000 Sobic008G025000 Sobic008G025000 Sobic004G269300--Sobic008G025000 Sobic002G033550 Sobic002G033550 Sobic004G269300--Sobic002G033550 Sobic004G269300--Sobic008G068700 Sobic002G000900 Sobic002G000900 Sobic004G269300--Sobic002G000900 Sobic004G269300--Sobic002G245700 Sobic009G106601 Sobic009G106601 Sobic004G269300--Sobic009G106601 Sobic004G176950 Sobic004G176950 Sobic004G269300--Sobic004G176950 Sobic004G269300--Sobic001G472050 Sobic006G190150 Sobic006G190150 Sobic010G276301--Sobic006G190150 Sobic003G277550 Sobic003G277550 Sobic010G276301--Sobic003G277550 Sobic010G276301--Sobic002G427600 Sobic007G212250 Sobic007G212250 Sobic010G276301--Sobic007G212250 Sobic010G276301--Sobic007G220033 Sobic001G382332 Sobic001G382332 Sobic010G276301--Sobic001G382332 Sobic010G126700 Sobic010G126700 Sobic010G276301--Sobic010G126700 Sobic002G406000 Sobic002G406000 Sobic010G276301--Sobic002G406000 Sobic010G276301--Sobic004G201000 Sobic008G068700--Sobic001G273875 Sobic001G529100 Sobic001G529100 Sobic008G068700--Sobic001G529100 Sobic008G068700--Sobic004G201000 Sobic008G068700--Sobic006G011450 Sobic010G276850 Sobic010G276850 Sobic008G068700--Sobic010G276850 Sobic008G068700--Sobic010G155401 Sobic008G068700--Sobic004G065950 Sobic001G038050 Sobic001G038050 Sobic008G068700--Sobic001G038050 Sobic008G068700--Sobic003G125751 Sobic004G201000--Sobic010G155401 Sobic004G201000--Sobic004G065950 Sobic004G201000--Sobic001G273875 Sobic004G201000--Sobic003G125751 Sobic004G201000--Sobic004G290850 Sobic004G201000--Sobic002G427600 Sobic004G201000--Sobic006G011450 Sobic004G201000--Sobic007G220033 Sobic004G201000--Sobic010G023650 Sobic010G155401--Sobic004G201000 Sobic010G155401--Sobic004G065950 Sobic010G155401--Sobic001G273875 Sobic010G155401--Sobic003G125751 Sobic010G155401--Sobic004G290850 Sobic010G155401--Sobic002G427600 Sobic010G155401--Sobic006G011450 Sobic010G155401--Sobic007G220033 Sobic010G155401--Sobic010G023650 Sobic004G290850--Sobic004G201000 Sobic004G290850--Sobic010G155401 Sobic004G290850--Sobic004G065950 Sobic004G290850--Sobic003G125751 Sobic004G290850--Sobic001G273875 Sobic004G290850--Sobic002G427600 Sobic004G290850--Sobic006G011450 Sobic004G290850--Sobic007G220033 Sobic004G290850--Sobic010G023650
Octagon: transcription factors


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