Gene annotation
Transcriptome id Sobic.005G171200.1
Synonym Sb05g023140
Functional annotation transporter family protein, putative, expressed
UniProt A0A1B6PT23
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF127
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G61520 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os11g38160.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a046980 , Zm00025a050081 , Zm00025a006850
Brachypodium KQJ90241 , PNT63360
Barley HORVU6Hr1G090780.8 , HORVU6Hr1G090780.2 , HORVU6Hr1G090780.7 , HORVU6Hr1G090780.4 , HORVU6Hr1G090780.5 , HORVU3Hr1G018700.2 , HORVU3Hr1G018740.1 , HORVU3Hr1G018700.1 , HORVU3Hr1G102860.6 , HORVU3Hr1G102860.7 , HORVU3Hr1G102860.5 , HORVU3Hr1G102860.2 , HORVU3Hr1G102860.3 , HORVU3Hr1G102860.1 , HORVU6Hr1G090780.10 , HORVU3Hr1G018740.2 , HORVU5Hr1G065630.1 , HORVU5Hr1G065630.3 , HORVU5Hr1G065630.2 , HORVU5Hr1G065630.5 , HORVU5Hr1G065630.4 , HORVU6Hr1G090780.3 , HORVU6Hr1G090780.1 , HORVU5Hr1G065660.2 , HORVU5Hr1G065660.1
Wheat TraesCS3D02G105000 , TraesCS3B02G120300 , TraesCS5D02G549900 , TraesCS5D02G234100 , TraesCS5B02G225100 , TraesCS5B02G225400 , TraesCS5B02G225300 , TraesCS3A02G102800 , TraesCS5A02G226500 , TraesCS4A02G314900 , TraesCS5D02G233900 , TraesCS5D02G234200 , TraesCS5A02G226700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G065501 - -
2 Sobic.010G004500 expressed protein -
3 Sobic.003G325100 NB-ARC domain containing protein, expressed -
4 Sobic.002G202800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY62, expressed -
5 Sobic.003G310000 no apical meristem protein, expressed -
6 Sobic.004G181200 RING-H2 finger protein ATL3F, putative, expressed -
7 Sobic.002G354400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyol transporter 5, putative, expressed -
8 Sobic.001G363200 expressed protein -
9 Sobic.006G231600 acetyltransferase, GNAT family, putative, expressed -
10 Sobic.006G113900 heavy metal associated domain containing protein, expressed -
11 Sobic.003G242800 down-regulated TF in developmental senescence(PubMedID : 27586543)@WRKY15, expressed -
12 Sobic.003G258700 expressed protein -
13 Sobic.003G037100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G052500 - -
15 Sobic.001G330925 - -
16 Sobic.002G269032 - -
17 Sobic.003G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
18 Sobic.006G246200 protein kinase, putative, expressed -
19 Sobic.002G241250 - -
20 Sobic.002G273800 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic005G171200 Sobic005G171200 Sobic003G065501 Sobic003G065501 Sobic005G171200--Sobic003G065501 Sobic010G004500 Sobic010G004500 Sobic005G171200--Sobic010G004500 Sobic003G325100 Sobic003G325100 Sobic005G171200--Sobic003G325100 Sobic002G202800 Sobic002G202800 Sobic005G171200--Sobic002G202800 Sobic003G310000 Sobic003G310000 Sobic005G171200--Sobic003G310000 Sobic004G181200 Sobic004G181200 Sobic005G171200--Sobic004G181200 Sobic002G354400 Sobic002G354400 Sobic005G171200--Sobic002G354400 Sobic001G363200 Sobic001G363200 Sobic005G171200--Sobic001G363200 Sobic006G231600 Sobic006G231600 Sobic005G171200--Sobic006G231600 Sobic003G065501--Sobic005G171200 Sobic003G065501--Sobic003G310000 Sobic003G065501--Sobic010G004500 Sobic002G208850 Sobic002G208850 Sobic003G065501--Sobic002G208850 Sobic008G162400 Sobic008G162400 Sobic003G065501--Sobic008G162400 Sobic001G182400 Sobic001G182400 Sobic003G065501--Sobic001G182400 Sobic009G111100 Sobic009G111100 Sobic003G065501--Sobic009G111100 Sobic003G065501--Sobic003G325100 Sobic003G065501--Sobic004G181200 Sobic010G004500--Sobic003G325100 Sobic008G095100 Sobic008G095100 Sobic010G004500--Sobic008G095100 Sobic001G059300 Sobic001G059300 Sobic010G004500--Sobic001G059300 Sobic002G070700 Sobic002G070700 Sobic010G004500--Sobic002G070700 Sobic009G092200 Sobic009G092200 Sobic010G004500--Sobic009G092200 Sobic007G072166 Sobic007G072166 Sobic010G004500--Sobic007G072166 Sobic010G004500--Sobic002G202800 Sobic003G080500 Sobic003G080500 Sobic010G004500--Sobic003G080500 Sobic004G157200 Sobic004G157200 Sobic010G004500--Sobic004G157200 Sobic004G138400 Sobic004G138400 Sobic003G325100--Sobic004G138400 Sobic003G325100--Sobic002G202800 Sobic003G325100--Sobic010G004500 Sobic002G064200 Sobic002G064200 Sobic003G325100--Sobic002G064200 Sobic003G325100--Sobic008G095100 Sobic009G111800 Sobic009G111800 Sobic003G325100--Sobic009G111800 Sobic003G242800 Sobic003G242800 Sobic003G325100--Sobic003G242800 Sobic004G106200 Sobic004G106200 Sobic003G325100--Sobic004G106200 Sobic003G325100--Sobic001G059300 Sobic003G258700 Sobic003G258700 Sobic002G202800--Sobic003G258700 Sobic002G202800--Sobic002G064200 Sobic002G202800--Sobic002G354400 Sobic002G202800--Sobic003G325100 Sobic003G037100 Sobic003G037100 Sobic002G202800--Sobic003G037100 Sobic009G115500 Sobic009G115500 Sobic002G202800--Sobic009G115500 Sobic002G202800--Sobic003G242800 Sobic002G202800--Sobic001G363200 Sobic002G202700 Sobic002G202700 Sobic002G202800--Sobic002G202700 Sobic003G310000--Sobic005G171200 Sobic003G310000--Sobic010G004500 Sobic003G310000--Sobic001G059300 Sobic003G310000--Sobic003G325100 Sobic003G310000--Sobic009G092200 Sobic003G310000--Sobic003G065501 Sobic001G330925 Sobic001G330925 Sobic003G310000--Sobic001G330925 Sobic003G310000--Sobic003G242800 Sobic003G310000--Sobic002G202800 Sobic006G113400 Sobic006G113400 Sobic004G181200--Sobic006G113400 Sobic004G181200--Sobic001G363200 Sobic004G160300 Sobic004G160300 Sobic004G181200--Sobic004G160300 Sobic001G259500 Sobic001G259500 Sobic004G181200--Sobic001G259500 Sobic006G246200 Sobic006G246200 Sobic004G181200--Sobic006G246200 Sobic002G354400--Sobic002G202800 Sobic002G354400--Sobic003G037100 Sobic002G354400--Sobic001G363200 Sobic002G354400--Sobic004G181200 Sobic002G354400--Sobic004G160300 Sobic002G354400--Sobic003G258700 Sobic002G241250 Sobic002G241250 Sobic002G354400--Sobic002G241250 Sobic009G241500 Sobic009G241500 Sobic002G354400--Sobic009G241500 Sobic002G354400--Sobic006G246200 Sobic001G363200--Sobic004G160300 Sobic001G363200--Sobic004G181200 Sobic001G363200--Sobic002G354400 Sobic001G363200--Sobic003G258700 Sobic001G363200--Sobic002G202800 Sobic002G173900 Sobic002G173900 Sobic001G363200--Sobic002G173900 Sobic001G363200--Sobic002G064200 Sobic001G363200--Sobic003G037100 Sobic003G256000 Sobic003G256000 Sobic001G363200--Sobic003G256000 Sobic005G171100 Sobic005G171100 Sobic006G231600--Sobic005G171100 Sobic003G291700 Sobic003G291700 Sobic006G231600--Sobic003G291700 Sobic006G231600--Sobic006G246200 Sobic001G136300 Sobic001G136300 Sobic006G231600--Sobic001G136300 Sobic001G319100 Sobic001G319100 Sobic006G231600--Sobic001G319100 Sobic001G146500 Sobic001G146500 Sobic006G231600--Sobic001G146500 Sobic002G209100 Sobic002G209100 Sobic006G231600--Sobic002G209100 Sobic010G155300 Sobic010G155300 Sobic006G231600--Sobic010G155300 Sobic005G082700 Sobic005G082700 Sobic006G231600--Sobic005G082700
Octagon: transcription factors


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