Gene annotation
Transcriptome id Sobic.003G310000.1
Synonym VNI2, NAC083, ANAC083, Sb03g035820
Functional annotation no apical meristem protein, expressed
UniProt C5XKZ8
Pfam PF02365
Panther DB PTHR31719 PTHR31719:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G17260 : NAC domain containing protein 86
RAP-DB (Rice) LOC_Os07g17180.1 : no apical meristem protein, expressed
MaizeGDB (Corn) -
Brachypodium PNT67917
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G171200 transporter family protein, putative, expressed -
2 Sobic.010G004500 expressed protein -
3 Sobic.001G059300 acetyltransferase, GNAT family, putative, expressed -
4 Sobic.003G325100 NB-ARC domain containing protein, expressed -
5 Sobic.009G092200 - -
6 Sobic.003G065501 - -
7 Sobic.001G330925 - -
8 Sobic.003G242800 down-regulated TF in developmental senescence(PubMedID : 27586543)@WRKY15, expressed -
9 Sobic.002G202800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY62, expressed -
10 Sobic.002G354400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyol transporter 5, putative, expressed -
11 Sobic.004G138400 WRKY51, expressed -
12 Sobic.003G258700 expressed protein -
13 Sobic.005G165900 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.010G275001 - -
15 Sobic.004G181200 RING-H2 finger protein ATL3F, putative, expressed -
16 Sobic.006G030250 - -
17 Sobic.010G163150 - -
18 Sobic.007G077300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
19 Sobic.001G320101 - -
20 Sobic.004G157200 - -


Gene co-expression network
sample Sobic003G310000 Sobic003G310000 Sobic005G171200 Sobic005G171200 Sobic003G310000--Sobic005G171200 Sobic010G004500 Sobic010G004500 Sobic003G310000--Sobic010G004500 Sobic001G059300 Sobic001G059300 Sobic003G310000--Sobic001G059300 Sobic003G325100 Sobic003G325100 Sobic003G310000--Sobic003G325100 Sobic009G092200 Sobic009G092200 Sobic003G310000--Sobic009G092200 Sobic003G065501 Sobic003G065501 Sobic003G310000--Sobic003G065501 Sobic001G330925 Sobic001G330925 Sobic003G310000--Sobic001G330925 Sobic003G242800 Sobic003G242800 Sobic003G310000--Sobic003G242800 Sobic002G202800 Sobic002G202800 Sobic003G310000--Sobic002G202800 Sobic005G171200--Sobic003G065501 Sobic005G171200--Sobic010G004500 Sobic005G171200--Sobic003G325100 Sobic005G171200--Sobic002G202800 Sobic005G171200--Sobic003G310000 Sobic004G181200 Sobic004G181200 Sobic005G171200--Sobic004G181200 Sobic002G354400 Sobic002G354400 Sobic005G171200--Sobic002G354400 Sobic001G363200 Sobic001G363200 Sobic005G171200--Sobic001G363200 Sobic006G231600 Sobic006G231600 Sobic005G171200--Sobic006G231600 Sobic010G004500--Sobic003G325100 Sobic008G095100 Sobic008G095100 Sobic010G004500--Sobic008G095100 Sobic010G004500--Sobic001G059300 Sobic002G070700 Sobic002G070700 Sobic010G004500--Sobic002G070700 Sobic010G004500--Sobic009G092200 Sobic007G072166 Sobic007G072166 Sobic010G004500--Sobic007G072166 Sobic010G004500--Sobic002G202800 Sobic003G080500 Sobic003G080500 Sobic010G004500--Sobic003G080500 Sobic004G157200 Sobic004G157200 Sobic010G004500--Sobic004G157200 Sobic006G030250 Sobic006G030250 Sobic001G059300--Sobic006G030250 Sobic010G127500 Sobic010G127500 Sobic001G059300--Sobic010G127500 Sobic008G091100 Sobic008G091100 Sobic001G059300--Sobic008G091100 Sobic004G087432 Sobic004G087432 Sobic001G059300--Sobic004G087432 Sobic002G373500 Sobic002G373500 Sobic001G059300--Sobic002G373500 Sobic001G317900 Sobic001G317900 Sobic001G059300--Sobic001G317900 Sobic004G138400 Sobic004G138400 Sobic003G325100--Sobic004G138400 Sobic003G325100--Sobic002G202800 Sobic003G325100--Sobic010G004500 Sobic002G064200 Sobic002G064200 Sobic003G325100--Sobic002G064200 Sobic003G325100--Sobic008G095100 Sobic009G111800 Sobic009G111800 Sobic003G325100--Sobic009G111800 Sobic003G325100--Sobic003G242800 Sobic004G106200 Sobic004G106200 Sobic003G325100--Sobic004G106200 Sobic003G325100--Sobic001G059300 Sobic009G092200--Sobic006G030250 Sobic009G092200--Sobic010G127500 Sobic009G092200--Sobic008G091100 Sobic009G092200--Sobic001G317900 Sobic005G083932 Sobic005G083932 Sobic009G092200--Sobic005G083932 Sobic002G191200 Sobic002G191200 Sobic009G092200--Sobic002G191200 Sobic003G065501--Sobic005G171200 Sobic003G065501--Sobic003G310000 Sobic003G065501--Sobic010G004500 Sobic002G208850 Sobic002G208850 Sobic003G065501--Sobic002G208850 Sobic008G162400 Sobic008G162400 Sobic003G065501--Sobic008G162400 Sobic001G182400 Sobic001G182400 Sobic003G065501--Sobic001G182400 Sobic009G111100 Sobic009G111100 Sobic003G065501--Sobic009G111100 Sobic003G065501--Sobic003G325100 Sobic003G065501--Sobic004G181200 Sobic001G330925--Sobic004G138400 Sobic001G330925--Sobic002G202800 Sobic009G115500 Sobic009G115500 Sobic001G330925--Sobic009G115500 Sobic002G214500 Sobic002G214500 Sobic001G330925--Sobic002G214500 Sobic003G401500 Sobic003G401500 Sobic001G330925--Sobic003G401500 Sobic001G330925--Sobic003G242800 Sobic001G330925--Sobic003G325100 Sobic003G258700 Sobic003G258700 Sobic001G330925--Sobic003G258700 Sobic001G330925--Sobic002G354400 Sobic003G242800--Sobic002G202800 Sobic003G242800--Sobic003G258700 Sobic003G242800--Sobic004G138400 Sobic003G242800--Sobic003G325100 Sobic003G242800--Sobic002G064200 Sobic005G165900 Sobic005G165900 Sobic003G242800--Sobic005G165900 Sobic004G160300 Sobic004G160300 Sobic003G242800--Sobic004G160300 Sobic003G242800--Sobic001G363200 Sobic003G242800--Sobic001G330925 Sobic002G202800--Sobic003G258700 Sobic002G202800--Sobic002G064200 Sobic002G202800--Sobic002G354400 Sobic002G202800--Sobic003G325100 Sobic003G037100 Sobic003G037100 Sobic002G202800--Sobic003G037100 Sobic002G202800--Sobic009G115500 Sobic002G202800--Sobic003G242800 Sobic002G202800--Sobic001G363200 Sobic002G202700 Sobic002G202700 Sobic002G202800--Sobic002G202700
Octagon: transcription factors


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