Gene annotation
Transcriptome id Sobic.002G174801.1
Synonym -
Functional annotation -
UniProt A0A1W0W4N1
Pfam PF00069
Panther DB PTHR27007 PTHR27007:SF38
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G10530 : Concanavalin A-like lectin protein kinase family protein
RAP-DB (Rice) LOC_Os09g16540.1 : protein kinase, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ89883
Barley HORVU0Hr1G022290.2 , HORVU0Hr1G022290.1 , HORVU7Hr1G113560.4
Wheat TraesCS5B02G184000 , TraesCS5D02G025500 , TraesCS5D02G191000 , TraesCS5D02G344700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G448800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lecithin cholesterol acyltransferase, putative, expressed -
2 Sobic.009G115300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.004G078600 lipoxygenase, putative, expressed K00454: lipoxygenase
4 Sobic.003G310200 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1
5 Sobic.001G012000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
6 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.002G202700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY76, expressed -
8 Sobic.003G378301 - K17362: acyl-coenzyme A thioesterase 13
9 Sobic.006G007650 - -
10 Sobic.005G182701 - -
11 Sobic.006G045000 drought-induced protein 1, putative, expressed -
12 Sobic.002G108400 cytochrome P450, putative, expressed -
13 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
14 Sobic.001G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
15 Sobic.K044407 - -
16 Sobic.007G055600 "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K14174: beta-farnesene/exo-alpha-bergamotene synthase
17 Sobic.002G041800 gibberellin receptor GID1L2, putative, expressed -
18 Sobic.007G076000 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
19 Sobic.002G423600 "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
20 Sobic.010G130800 Acyl activating enzyme 1 AAE1 (At)(PubMedID : 27208977)@AMP-binding enzyme, putative, expressed K00666: fatty-acyl-CoA synthase


Gene co-expression network
sample Sobic002G174801 Sobic002G174801 Sobic001G448800 Sobic001G448800 Sobic002G174801--Sobic001G448800 Sobic009G115300 Sobic009G115300 Sobic002G174801--Sobic009G115300 Sobic004G078600 Sobic004G078600 Sobic002G174801--Sobic004G078600 Sobic003G310200 Sobic003G310200 Sobic002G174801--Sobic003G310200 Sobic001G012000 Sobic001G012000 Sobic002G174801--Sobic001G012000 Sobic009G115400 Sobic009G115400 Sobic002G174801--Sobic009G115400 Sobic002G202700 Sobic002G202700 Sobic002G174801--Sobic002G202700 Sobic003G378301 Sobic003G378301 Sobic002G174801--Sobic003G378301 Sobic006G007650 Sobic006G007650 Sobic002G174801--Sobic006G007650 Sobic004G007500 Sobic004G007500 Sobic001G448800--Sobic004G007500 Sobic009G075100 Sobic009G075100 Sobic001G448800--Sobic009G075100 Sobic004G179500 Sobic004G179500 Sobic001G448800--Sobic004G179500 Sobic001G448800--Sobic002G174801 Sobic001G448800--Sobic004G078600 Sobic003G214000 Sobic003G214000 Sobic001G448800--Sobic003G214000 Sobic009G000900 Sobic009G000900 Sobic001G448800--Sobic009G000900 Sobic009G233900 Sobic009G233900 Sobic001G448800--Sobic009G233900 Sobic001G320700 Sobic001G320700 Sobic001G448800--Sobic001G320700 Sobic005G182701 Sobic005G182701 Sobic009G115300--Sobic005G182701 Sobic007G055600 Sobic007G055600 Sobic009G115300--Sobic007G055600 Sobic007G076000 Sobic007G076000 Sobic009G115300--Sobic007G076000 Sobic009G115300--Sobic001G012000 Sobic009G115300--Sobic009G115400 Sobic009G115300--Sobic006G007650 Sobic001G056400 Sobic001G056400 Sobic009G115300--Sobic001G056400 Sobic006G005500 Sobic006G005500 Sobic009G115300--Sobic006G005500 Sobic001G125700 Sobic001G125700 Sobic009G115300--Sobic001G125700 Sobic001G201800 Sobic001G201800 Sobic004G078600--Sobic001G201800 Sobic002G423600 Sobic002G423600 Sobic004G078600--Sobic002G423600 Sobic004G078600--Sobic009G115400 Sobic002G041800 Sobic002G041800 Sobic004G078600--Sobic002G041800 Sobic004G078600--Sobic009G075100 Sobic004G078600--Sobic005G182701 Sobic004G078600--Sobic001G012000 Sobic009G252100 Sobic009G252100 Sobic004G078600--Sobic009G252100 Sobic004G078600--Sobic007G055600 SobicK044407 SobicK044407 Sobic003G310200--SobicK044407 Sobic003G310200--Sobic001G012000 Sobic003G310200--Sobic003G378301 Sobic003G310200--Sobic001G056400 Sobic008G181801 Sobic008G181801 Sobic003G310200--Sobic008G181801 Sobic006G045000 Sobic006G045000 Sobic003G310200--Sobic006G045000 Sobic003G310200--Sobic002G423600 Sobic004G217700 Sobic004G217700 Sobic003G310200--Sobic004G217700 Sobic010G130800 Sobic010G130800 Sobic003G310200--Sobic010G130800 Sobic001G012000--SobicK044407 Sobic001G012000--Sobic001G056400 Sobic001G012000--Sobic006G045000 Sobic001G012000--Sobic005G182701 Sobic001G012000--Sobic009G115300 Sobic001G012000--Sobic002G423600 Sobic001G012000--Sobic008G181801 Sobic001G012000--Sobic003G310200 Sobic001G012000--Sobic009G115400 Sobic009G115400--Sobic001G125700 Sobic009G115400--Sobic006G005500 Sobic009G115400--Sobic007G076000 Sobic009G115400--Sobic007G055600 Sobic009G115400--Sobic005G182701 Sobic006G005400 Sobic006G005400 Sobic009G115400--Sobic006G005400 Sobic009G115400--Sobic001G201800 Sobic005G219000 Sobic005G219000 Sobic009G115400--Sobic005G219000 Sobic005G219100 Sobic005G219100 Sobic009G115400--Sobic005G219100 Sobic002G108400 Sobic002G108400 Sobic002G202700--Sobic002G108400 Sobic002G202700--Sobic009G115400 Sobic002G202700--Sobic001G201800 Sobic002G202700--Sobic009G115300 Sobic010G225500 Sobic010G225500 Sobic002G202700--Sobic010G225500 Sobic002G202700--Sobic001G012000 Sobic002G202700--Sobic006G005400 Sobic002G202700--Sobic006G007650 Sobic002G202700--Sobic006G005500 Sobic003G378301--Sobic001G056400 Sobic003G378301--SobicK044407 Sobic003G378301--Sobic001G012000 Sobic003G378301--Sobic002G423600 Sobic003G378301--Sobic004G217700 Sobic003G378301--Sobic005G182701 Sobic003G378301--Sobic003G310200 Sobic003G378301--Sobic006G045000 Sobic003G378301--Sobic007G055600 Sobic008G028600 Sobic008G028600 Sobic006G007650--Sobic008G028600 Sobic006G007650--Sobic006G005500 Sobic006G007650--Sobic007G076000 Sobic002G040400 Sobic002G040400 Sobic006G007650--Sobic002G040400 Sobic006G007650--Sobic001G125700 Sobic006G007650--Sobic005G219000 Sobic006G007650--Sobic007G055600 Sobic002G087500 Sobic002G087500 Sobic006G007650--Sobic002G087500 Sobic002G298400 Sobic002G298400 Sobic006G007650--Sobic002G298400
Octagon: transcription factors


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