Gene annotation
Transcriptome id Sobic.003G333501.1
Synonym -
Functional annotation -
UniProt A0A1W0W034
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G333400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.002G329100 TKL_IRAK_DUF26-ld.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
3 Sobic.004G067200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
4 Sobic.009G210600 GTPase-activating protein, putative, expressed -
5 Sobic.001G393800 enoyl-CoA hydratase/isomerase family protein, putative, expressed -
6 Sobic.004G276100 expressed protein -
7 Sobic.007G195100 peptidase, T1 family, putative, expressed K02732: 20S proteasome subunit beta 6
8 Sobic.001G409200 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
9 Sobic.009G038401 - -
10 Sobic.004G255200 CSLE2 - cellulose synthase-like family E, expressed -
11 Sobic.002G113100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@membrane associated DUF588 domain containing protein, putative, expressed -
12 Sobic.004G130900 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
13 Sobic.010G176700 receptor-like protein kinase precursor, putative, expressed -
14 Sobic.008G179500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed K07213: ATOX1, ATX1, copZ, copper chaperone
15 Sobic.004G167400 expressed protein -
16 Sobic.004G050100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
17 Sobic.009G111600 expressed protein -
18 Sobic.001G224700 expressed protein -
19 Sobic.009G099500 expressed protein -
20 Sobic.003G367451 - K08516: synaptobrevin homolog YKT6


Gene co-expression network
sample Sobic003G333501 Sobic003G333501 Sobic003G333400 Sobic003G333400 Sobic003G333501--Sobic003G333400 Sobic002G329100 Sobic002G329100 Sobic003G333501--Sobic002G329100 Sobic004G067200 Sobic004G067200 Sobic003G333501--Sobic004G067200 Sobic009G210600 Sobic009G210600 Sobic003G333501--Sobic009G210600 Sobic001G393800 Sobic001G393800 Sobic003G333501--Sobic001G393800 Sobic004G276100 Sobic004G276100 Sobic003G333501--Sobic004G276100 Sobic007G195100 Sobic007G195100 Sobic003G333501--Sobic007G195100 Sobic001G409200 Sobic001G409200 Sobic003G333501--Sobic001G409200 Sobic009G038401 Sobic009G038401 Sobic003G333501--Sobic009G038401 Sobic003G333400--Sobic007G195100 Sobic009G146100 Sobic009G146100 Sobic003G333400--Sobic009G146100 Sobic002G180600 Sobic002G180600 Sobic003G333400--Sobic002G180600 Sobic008G179500 Sobic008G179500 Sobic003G333400--Sobic008G179500 Sobic003G333400--Sobic004G276100 Sobic004G277000 Sobic004G277000 Sobic003G333400--Sobic004G277000 Sobic002G249000 Sobic002G249000 Sobic003G333400--Sobic002G249000 Sobic004G050000 Sobic004G050000 Sobic003G333400--Sobic004G050000 Sobic003G253000 Sobic003G253000 Sobic003G333400--Sobic003G253000 Sobic002G329100--Sobic004G276100 Sobic007G078100 Sobic007G078100 Sobic002G329100--Sobic007G078100 Sobic009G043600 Sobic009G043600 Sobic002G329100--Sobic009G043600 Sobic002G329100--Sobic003G333400 Sobic006G106800 Sobic006G106800 Sobic002G329100--Sobic006G106800 Sobic002G329100--Sobic004G277000 Sobic004G272800 Sobic004G272800 Sobic002G329100--Sobic004G272800 Sobic002G233000 Sobic002G233000 Sobic002G329100--Sobic002G233000 Sobic002G155500 Sobic002G155500 Sobic002G329100--Sobic002G155500 Sobic001G157200 Sobic001G157200 Sobic004G067200--Sobic001G157200 Sobic004G067200--Sobic003G333501 Sobic009G099500 Sobic009G099500 Sobic004G067200--Sobic009G099500 Sobic002G130700 Sobic002G130700 Sobic004G067200--Sobic002G130700 Sobic002G241400 Sobic002G241400 Sobic004G067200--Sobic002G241400 Sobic004G067200--Sobic009G210600 Sobic004G067200--Sobic009G038401 Sobic001G427200 Sobic001G427200 Sobic004G067200--Sobic001G427200 Sobic002G222800 Sobic002G222800 Sobic004G067200--Sobic002G222800 Sobic004G255200 Sobic004G255200 Sobic009G210600--Sobic004G255200 Sobic010G210200 Sobic010G210200 Sobic009G210600--Sobic010G210200 Sobic005G086100 Sobic005G086100 Sobic009G210600--Sobic005G086100 Sobic002G087800 Sobic002G087800 Sobic009G210600--Sobic002G087800 Sobic009G167700 Sobic009G167700 Sobic009G210600--Sobic009G167700 Sobic003G354400 Sobic003G354400 Sobic009G210600--Sobic003G354400 Sobic001G334600 Sobic001G334600 Sobic009G210600--Sobic001G334600 Sobic004G225100 Sobic004G225100 Sobic009G210600--Sobic004G225100 Sobic004G345800 Sobic004G345800 Sobic009G210600--Sobic004G345800 Sobic008G107500 Sobic008G107500 Sobic001G393800--Sobic008G107500 Sobic005G150800 Sobic005G150800 Sobic001G393800--Sobic005G150800 Sobic001G010400 Sobic001G010400 Sobic001G393800--Sobic001G010400 Sobic001G393800--Sobic003G333400 Sobic004G167400 Sobic004G167400 Sobic001G393800--Sobic004G167400 Sobic001G057800 Sobic001G057800 Sobic001G393800--Sobic001G057800 Sobic002G175500 Sobic002G175500 Sobic001G393800--Sobic002G175500 Sobic001G393800--Sobic009G099500 Sobic001G023200 Sobic001G023200 Sobic001G393800--Sobic001G023200 Sobic004G276100--Sobic008G179500 Sobic004G276100--Sobic004G272800 Sobic004G276100--Sobic007G078100 Sobic009G111600 Sobic009G111600 Sobic004G276100--Sobic009G111600 Sobic004G276100--Sobic002G329100 Sobic004G276100--Sobic004G050000 Sobic006G108400 Sobic006G108400 Sobic004G276100--Sobic006G108400 Sobic004G276100--Sobic009G043600 Sobic004G284500 Sobic004G284500 Sobic004G276100--Sobic004G284500 Sobic007G195100--Sobic003G333400 Sobic003G367451 Sobic003G367451 Sobic007G195100--Sobic003G367451 Sobic002G296300 Sobic002G296300 Sobic007G195100--Sobic002G296300 Sobic007G195100--Sobic004G050000 Sobic001G403700 Sobic001G403700 Sobic007G195100--Sobic001G403700 Sobic007G195100--Sobic009G111600 Sobic002G159300 Sobic002G159300 Sobic007G195100--Sobic002G159300 Sobic003G323600 Sobic003G323600 Sobic007G195100--Sobic003G323600 Sobic001G132100 Sobic001G132100 Sobic007G195100--Sobic001G132100 Sobic004G333200 Sobic004G333200 Sobic001G409200--Sobic004G333200 Sobic003G442500 Sobic003G442500 Sobic001G409200--Sobic003G442500 Sobic001G409200--Sobic010G210200 Sobic006G132500 Sobic006G132500 Sobic001G409200--Sobic006G132500 Sobic003G061400 Sobic003G061400 Sobic001G409200--Sobic003G061400 Sobic003G280900 Sobic003G280900 Sobic001G409200--Sobic003G280900 Sobic001G409200--Sobic009G210600 Sobic001G409200--Sobic001G393800 Sobic001G409200--Sobic003G333501 Sobic009G038401--Sobic002G249000 Sobic006G140200 Sobic006G140200 Sobic009G038401--Sobic006G140200 Sobic010G176700 Sobic010G176700 Sobic009G038401--Sobic010G176700 Sobic001G401300 Sobic001G401300 Sobic009G038401--Sobic001G401300 Sobic008G059200 Sobic008G059200 Sobic009G038401--Sobic008G059200 Sobic003G075500 Sobic003G075500 Sobic009G038401--Sobic003G075500 Sobic009G038401--Sobic002G329100 Sobic001G066000 Sobic001G066000 Sobic009G038401--Sobic001G066000 Sobic009G038401--Sobic009G043600
Octagon: transcription factors


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