Gene annotation
Transcriptome id Sobic.001G255400.1
Synonym
Functional annotation -
UniProt A0A1B6QKY9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G120000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
2 Sobic.004G055600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide containing protein, putative, expressed -
3 Sobic.002G004000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxygen evolving enhancer protein 3 domain containing protein, expressed K08901: photosystem II oxygen-evolving enhancer protein 3
4 Sobic.009G233800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf23, putative, expressed -
5 Sobic.006G204100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
6 Sobic.006G265400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
7 Sobic.001G076200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf44, putative, expressed K07399: resB, cytochrome c biogenesis protein
8 Sobic.003G283100 OsSub3 - Putative Subtilisin homologue, expressed -
9 Sobic.001G426400 expressed protein -
10 Sobic.004G017200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.001G228300 SAP domain containing protein, expressed -
12 Sobic.009G253000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA polymerase sigma factor, putative, expressed -
13 Sobic.009G136900 peptide transporter PTR2, putative, expressed -
14 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
15 Sobic.004G249500 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
16 Sobic.001G395300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsClp4 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
17 Sobic.002G384400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K03146: THI4, cysteine-dependent adenosine diphosphate thiazole synthase
18 Sobic.009G238100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
19 Sobic.007G060900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@disease resistance protein RPM1, putative, expressed -
20 Sobic.010G074200 - -


Gene co-expression network
sample Sobic001G255400 Sobic001G255400 Sobic001G120000 Sobic001G120000 Sobic001G255400--Sobic001G120000 Sobic004G055600 Sobic004G055600 Sobic001G255400--Sobic004G055600 Sobic002G004000 Sobic002G004000 Sobic001G255400--Sobic002G004000 Sobic009G233800 Sobic009G233800 Sobic001G255400--Sobic009G233800 Sobic006G204100 Sobic006G204100 Sobic001G255400--Sobic006G204100 Sobic006G265400 Sobic006G265400 Sobic001G255400--Sobic006G265400 Sobic001G076200 Sobic001G076200 Sobic001G255400--Sobic001G076200 Sobic003G283100 Sobic003G283100 Sobic001G255400--Sobic003G283100 Sobic001G426400 Sobic001G426400 Sobic001G255400--Sobic001G426400 Sobic004G044000 Sobic004G044000 Sobic001G120000--Sobic004G044000 Sobic004G191200 Sobic004G191200 Sobic001G120000--Sobic004G191200 Sobic002G190800 Sobic002G190800 Sobic001G120000--Sobic002G190800 Sobic006G263800 Sobic006G263800 Sobic001G120000--Sobic006G263800 Sobic002G190100 Sobic002G190100 Sobic001G120000--Sobic002G190100 Sobic004G017200 Sobic004G017200 Sobic001G120000--Sobic004G017200 Sobic002G305700 Sobic002G305700 Sobic001G120000--Sobic002G305700 Sobic001G027600 Sobic001G027600 Sobic001G120000--Sobic001G027600 Sobic001G120000--Sobic001G255400 Sobic004G055600--Sobic009G233800 Sobic004G055600--Sobic002G004000 Sobic004G055600--Sobic001G076200 Sobic004G055600--Sobic001G255400 Sobic009G136900 Sobic009G136900 Sobic004G055600--Sobic009G136900 Sobic001G388400 Sobic001G388400 Sobic004G055600--Sobic001G388400 Sobic009G253000 Sobic009G253000 Sobic004G055600--Sobic009G253000 Sobic008G177850 Sobic008G177850 Sobic004G055600--Sobic008G177850 Sobic008G101500 Sobic008G101500 Sobic004G055600--Sobic008G101500 Sobic002G004000--Sobic004G055600 Sobic002G004000--Sobic006G204100 Sobic002G004000--Sobic001G120000 Sobic002G004000--Sobic004G017200 Sobic003G030900 Sobic003G030900 Sobic002G004000--Sobic003G030900 Sobic001G240000 Sobic001G240000 Sobic002G004000--Sobic001G240000 Sobic002G004000--Sobic002G305700 Sobic003G221700 Sobic003G221700 Sobic002G004000--Sobic003G221700 Sobic001G333000 Sobic001G333000 Sobic002G004000--Sobic001G333000 Sobic010G074200 Sobic010G074200 Sobic009G233800--Sobic010G074200 Sobic009G233800--Sobic006G204100 Sobic009G233800--Sobic001G388400 Sobic009G233800--Sobic004G055600 Sobic003G030400 Sobic003G030400 Sobic009G233800--Sobic003G030400 Sobic010G074100 Sobic010G074100 Sobic009G233800--Sobic010G074100 Sobic009G137000 Sobic009G137000 Sobic009G233800--Sobic009G137000 Sobic009G233800--Sobic001G076200 Sobic010G028000 Sobic010G028000 Sobic009G233800--Sobic010G028000 Sobic006G204100--Sobic010G074200 Sobic008G072300 Sobic008G072300 Sobic006G204100--Sobic008G072300 Sobic006G204100--Sobic001G388400 Sobic009G234200 Sobic009G234200 Sobic006G204100--Sobic009G234200 Sobic003G330100 Sobic003G330100 Sobic006G204100--Sobic003G330100 Sobic006G204100--Sobic009G233800 Sobic006G204100--Sobic010G028000 Sobic007G227600 Sobic007G227600 Sobic006G204100--Sobic007G227600 Sobic004G250200 Sobic004G250200 Sobic006G204100--Sobic004G250200 Sobic006G265400--Sobic001G426400 Sobic008G148400 Sobic008G148400 Sobic006G265400--Sobic008G148400 Sobic009G238100 Sobic009G238100 Sobic006G265400--Sobic009G238100 Sobic007G131200 Sobic007G131200 Sobic006G265400--Sobic007G131200 Sobic007G060900 Sobic007G060900 Sobic006G265400--Sobic007G060900 Sobic001G141300 Sobic001G141300 Sobic006G265400--Sobic001G141300 Sobic009G197000 Sobic009G197000 Sobic006G265400--Sobic009G197000 Sobic006G265400--Sobic001G255400 Sobic010G143400 Sobic010G143400 Sobic006G265400--Sobic010G143400 Sobic004G246800 Sobic004G246800 Sobic001G076200--Sobic004G246800 Sobic001G076200--Sobic003G030400 Sobic001G537700 Sobic001G537700 Sobic001G076200--Sobic001G537700 Sobic003G114100 Sobic003G114100 Sobic001G076200--Sobic003G114100 Sobic001G076200--Sobic009G233800 Sobic004G249500 Sobic004G249500 Sobic001G076200--Sobic004G249500 Sobic008G021700 Sobic008G021700 Sobic001G076200--Sobic008G021700 Sobic002G114700 Sobic002G114700 Sobic001G076200--Sobic002G114700 Sobic001G076200--Sobic004G055600 Sobic001G228300 Sobic001G228300 Sobic003G283100--Sobic001G228300 Sobic005G142900 Sobic005G142900 Sobic003G283100--Sobic005G142900 Sobic003G283100--Sobic001G120000 Sobic003G283100--Sobic006G263800 Sobic003G283100--Sobic001G255400 Sobic003G392000 Sobic003G392000 Sobic003G283100--Sobic003G392000 Sobic010G270900 Sobic010G270900 Sobic003G283100--Sobic010G270900 Sobic004G170600 Sobic004G170600 Sobic003G283100--Sobic004G170600 Sobic003G283100--Sobic004G055600 Sobic001G426400--Sobic006G265400 Sobic001G426400--Sobic008G148400 Sobic001G426400--Sobic009G238100 Sobic009G032100 Sobic009G032100 Sobic001G426400--Sobic009G032100 Sobic001G426400--Sobic004G249500 Sobic003G255100 Sobic003G255100 Sobic001G426400--Sobic003G255100 Sobic001G426400--Sobic003G030400 Sobic001G426400--Sobic007G060900 Sobic001G426400--Sobic007G131200
Octagon: transcription factors


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