Gene annotation
Transcriptome id Sobic.004G017200.2
Synonym Sb04g001625
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1Z5RLA2
Pfam -
Panther DB PTHR37230 PTHR37230:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G45050 : -
RAP-DB (Rice) LOC_Os06g51470.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G343700 expressed protein -
2 Sobic.004G044000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1303, putative, expressed -
3 Sobic.001G120000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
4 Sobic.001G027600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed K02881: RP-L18, MRPL18, large subunit ribosomal protein L18
5 Sobic.003G030900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G076500 ribosomal protein, putative, expressed K02996: RP-S9, MRPS9, small subunit ribosomal protein S9
7 Sobic.001G427000 ribosomal protein L4, putative, expressed K02926: RP-L4, MRPL4, large subunit ribosomal protein L4
8 Sobic.006G280050 - K02961: RP-S17, MRPS17, small subunit ribosomal protein S17
9 Sobic.003G095000 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
10 Sobic.002G004000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxygen evolving enhancer protein 3 domain containing protein, expressed K08901: photosystem II oxygen-evolving enhancer protein 3
11 Sobic.003G132600 plastid-specific 50S ribosomal protein 5, chloroplast precursor, putative, expressed K19034: 50S ribosomal protein 5
12 Sobic.001G191000 ribosomal protein, putative, expressed K02988: RP-S5, MRPS5, small subunit ribosomal protein S5
13 Sobic.001G411300 ribosomal protein L10, putative, expressed K02864: RP-L10, MRPL10, large subunit ribosomal protein L10
14 Sobic.002G190800 expressed protein -
15 Sobic.010G116500 expressed protein -
16 Sobic.003G256200 ribosomal protein rpS20, putative, expressed K02968: RP-S20, small subunit ribosomal protein S20
17 Sobic.001G383900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.007G034500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
19 Sobic.003G392000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PDE312/PTAC10, putative, expressed -
20 Sobic.001G453300 50S ribosomal protein L15, chloroplast precursor, putative, expressed K02876: RP-L15, MRPL15, large subunit ribosomal protein L15


Gene co-expression network
sample Sobic004G017200 Sobic004G017200 Sobic002G343700 Sobic002G343700 Sobic004G017200--Sobic002G343700 Sobic004G044000 Sobic004G044000 Sobic004G017200--Sobic004G044000 Sobic001G120000 Sobic001G120000 Sobic004G017200--Sobic001G120000 Sobic001G027600 Sobic001G027600 Sobic004G017200--Sobic001G027600 Sobic003G030900 Sobic003G030900 Sobic004G017200--Sobic003G030900 Sobic001G076500 Sobic001G076500 Sobic004G017200--Sobic001G076500 Sobic001G427000 Sobic001G427000 Sobic004G017200--Sobic001G427000 Sobic006G280050 Sobic006G280050 Sobic004G017200--Sobic006G280050 Sobic003G095000 Sobic003G095000 Sobic004G017200--Sobic003G095000 Sobic003G132600 Sobic003G132600 Sobic002G343700--Sobic003G132600 Sobic002G343700--Sobic001G076500 Sobic002G343700--Sobic004G017200 Sobic002G343700--Sobic001G427000 Sobic003G393800 Sobic003G393800 Sobic002G343700--Sobic003G393800 Sobic005G128100 Sobic005G128100 Sobic002G343700--Sobic005G128100 Sobic001G383900 Sobic001G383900 Sobic002G343700--Sobic001G383900 Sobic001G453300 Sobic001G453300 Sobic002G343700--Sobic001G453300 Sobic002G343700--Sobic004G044000 Sobic004G044000--Sobic001G027600 Sobic004G044000--Sobic001G383900 Sobic004G044000--Sobic006G280050 Sobic009G001500 Sobic009G001500 Sobic004G044000--Sobic009G001500 Sobic004G044000--Sobic003G030900 Sobic007G013400 Sobic007G013400 Sobic004G044000--Sobic007G013400 Sobic002G242600 Sobic002G242600 Sobic004G044000--Sobic002G242600 Sobic004G044000--Sobic001G076500 Sobic007G034500 Sobic007G034500 Sobic004G044000--Sobic007G034500 Sobic001G120000--Sobic004G044000 Sobic004G191200 Sobic004G191200 Sobic001G120000--Sobic004G191200 Sobic002G190800 Sobic002G190800 Sobic001G120000--Sobic002G190800 Sobic006G263800 Sobic006G263800 Sobic001G120000--Sobic006G263800 Sobic002G190100 Sobic002G190100 Sobic001G120000--Sobic002G190100 Sobic001G120000--Sobic004G017200 Sobic002G305700 Sobic002G305700 Sobic001G120000--Sobic002G305700 Sobic001G120000--Sobic001G027600 Sobic001G255400 Sobic001G255400 Sobic001G120000--Sobic001G255400 Sobic001G027600--Sobic001G453300 Sobic001G027600--Sobic001G427000 Sobic001G027600--Sobic001G076500 Sobic001G027600--Sobic004G044000 Sobic004G317900 Sobic004G317900 Sobic001G027600--Sobic004G317900 Sobic001G027600--Sobic001G383900 Sobic003G295800 Sobic003G295800 Sobic001G027600--Sobic003G295800 Sobic001G027600--Sobic004G191200 Sobic001G027600--Sobic006G280050 Sobic003G030900--Sobic001G027600 Sobic003G030900--Sobic004G044000 Sobic006G248200 Sobic006G248200 Sobic003G030900--Sobic006G248200 Sobic001G040000 Sobic001G040000 Sobic003G030900--Sobic001G040000 Sobic001G240000 Sobic001G240000 Sobic003G030900--Sobic001G240000 Sobic003G030900--Sobic007G013400 Sobic003G030900--Sobic002G242600 Sobic003G030900--Sobic004G317900 Sobic001G531200 Sobic001G531200 Sobic003G030900--Sobic001G531200 Sobic001G076500--Sobic001G427000 Sobic001G076500--Sobic001G027600 Sobic001G076500--Sobic001G453300 Sobic010G233800 Sobic010G233800 Sobic001G076500--Sobic010G233800 Sobic001G076500--Sobic001G383900 Sobic001G076500--Sobic003G393800 Sobic001G076500--Sobic003G132600 Sobic001G076500--Sobic004G044000 Sobic003G246400 Sobic003G246400 Sobic001G076500--Sobic003G246400 Sobic001G427000--Sobic001G076500 Sobic001G427000--Sobic001G027600 Sobic001G427000--Sobic001G453300 Sobic001G427000--Sobic003G132600 Sobic001G427000--Sobic010G233800 Sobic003G256200 Sobic003G256200 Sobic001G427000--Sobic003G256200 Sobic001G427000--Sobic003G393800 Sobic001G427000--Sobic003G246400 Sobic001G427000--Sobic001G383900 Sobic001G191000 Sobic001G191000 Sobic006G280050--Sobic001G191000 Sobic006G280050--Sobic001G027600 Sobic006G280050--Sobic003G246400 Sobic006G280050--Sobic004G044000 Sobic006G280050--Sobic004G191200 Sobic006G280050--Sobic004G317900 Sobic001G017000 Sobic001G017000 Sobic006G280050--Sobic001G017000 Sobic006G280050--Sobic001G076500 Sobic006G280050--Sobic001G453300 Sobic004G249400 Sobic004G249400 Sobic003G095000--Sobic004G249400 Sobic003G095000--Sobic004G044000 Sobic003G095000--Sobic001G076500 Sobic007G127600 Sobic007G127600 Sobic003G095000--Sobic007G127600 Sobic001G453200 Sobic001G453200 Sobic003G095000--Sobic001G453200 Sobic003G095000--Sobic004G017200 Sobic010G116500 Sobic010G116500 Sobic003G095000--Sobic010G116500 Sobic003G095000--Sobic001G427000 Sobic003G095000--Sobic002G343700
Octagon: transcription factors


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