Gene annotation
Transcriptome id Sobic.002G102900.1
Synonym Sb02g008760
Functional annotation uncharacterized protein PA4923, putative, expressed
UniProt A0A1W0W384
Pfam PF03641
Panther DB PTHR31223 PTHR31223:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G35190 : Putative lysine decarboxylase family protein
RAP-DB (Rice) LOC_Os09g37540.1 : uncharacterized protein PA4923, putative, expressed
MaizeGDB (Corn) Zm00025a047980
Brachypodium KQK11999 , PNT73754 , PNT73755 , PNT73756 , PNT73757 , PNT65084
Barley -
Wheat TraesCS5A02G347500 , TraesCS5B02G348400 , TraesCS5B02G348600 , TraesCS5B02G348300 , TraesCS5B02G561400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G221400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
2 Sobic.004G071750 - -
3 Sobic.002G352301 - -
4 Sobic.001G160700 integral membrane protein DUF6 containing protein, expressed -
5 Sobic.001G160700 integral membrane protein DUF6 containing protein, expressed -
6 Sobic.001G160700 integral membrane protein DUF6 containing protein, expressed -
7 Sobic.001G160700 integral membrane protein DUF6 containing protein, expressed -
8 Sobic.001G160700 integral membrane protein DUF6 containing protein, expressed -
9 Sobic.001G160700 integral membrane protein DUF6 containing protein, expressed -
10 Sobic.001G160700 integral membrane protein DUF6 containing protein, expressed -
11 Sobic.001G160700 integral membrane protein DUF6 containing protein, expressed -
12 Sobic.001G160700 integral membrane protein DUF6 containing protein, expressed -
13 Sobic.009G165200 plant-specific domain TIGR01589 family protein, expressed -
14 Sobic.001G066600 mTERF domain containing protein, expressed -
15 Sobic.005G204000 OsGrx_C17 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
16 Sobic.002G048501 - -
17 Sobic.008G117300 Glutaredoxin family protein (At)(PubMedID : 27208977)@OsGrx_C12 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
18 Sobic.006G026800 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
19 Sobic.004G170100 - -
20 Sobic.010G146100 aquaporin protein, putative, expressed K09873: aquaporin TIP


Gene co-expression network
sample Sobic002G102900 Sobic002G102900 Sobic007G221400 Sobic007G221400 Sobic002G102900--Sobic007G221400 Sobic004G071750 Sobic004G071750 Sobic002G102900--Sobic004G071750 Sobic002G352301 Sobic002G352301 Sobic002G102900--Sobic002G352301 Sobic001G160700 Sobic001G160700 Sobic002G102900--Sobic001G160700 Sobic007G221400--Sobic004G071750 Sobic008G117300 Sobic008G117300 Sobic007G221400--Sobic008G117300 Sobic005G204000 Sobic005G204000 Sobic007G221400--Sobic005G204000 Sobic001G066600 Sobic001G066600 Sobic007G221400--Sobic001G066600 Sobic007G221400--Sobic001G160700 Sobic004G071750--Sobic001G160700 Sobic005G042100 Sobic005G042100 Sobic002G352301--Sobic005G042100 Sobic002G201200 Sobic002G201200 Sobic002G352301--Sobic002G201200 Sobic002G082950 Sobic002G082950 Sobic002G352301--Sobic002G082950 Sobic001G274600 Sobic001G274600 Sobic002G352301--Sobic001G274600 Sobic005G152600 Sobic005G152600 Sobic002G352301--Sobic005G152600 Sobic009G229700 Sobic009G229700 Sobic002G352301--Sobic009G229700 Sobic002G352301--Sobic002G102900 Sobic006G073500 Sobic006G073500 Sobic002G352301--Sobic006G073500 Sobic002G352301--Sobic001G066600 Sobic001G160700--Sobic001G160700 Sobic001G160700--Sobic004G071750
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.