Gene annotation
Transcriptome id Sobic.003G260900.1
Synonym AR401, Sb03g031500
Functional annotation methyltransferase, putative, expressed
UniProt C5XGT9
Pfam PF13847
Panther DB PTHR12843 PTHR12843:SF5
NCBI CDD KOG1271; Methyltransferases
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G66680 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os01g49250.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a027991
Brachypodium KQK09237 , PNT72591 , PNT72590
Barley HORVU3Hr1G063690.8 , HORVU3Hr1G063690.13 , HORVU3Hr1G063690.12 , HORVU3Hr1G063690.11 , HORVU3Hr1G063690.10 , HORVU3Hr1G063690.3 , HORVU3Hr1G063690.2 , HORVU3Hr1G063690.6 , HORVU3Hr1G063690.1 , HORVU3Hr1G063690.9 , HORVU3Hr1G063690.7 , HORVU3Hr1G063690.5 , HORVU3Hr1G063690.4
Wheat TraesCS3B02G297500 , TraesCS3B02G297500 , TraesCS3B02G297500 , TraesCS3D02G264200 , TraesCS3D02G264200 , TraesCS3D02G264200 , TraesCS3A02G264100 , TraesCS3A02G264100
Populus -


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cDNA sequences
Sobic.003G260900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G155600 60S acidic ribosomal protein, putative, expressed K02943: RP-LP2, large subunit ribosomal protein LP2
2 Sobic.001G513800 ankyrin repeat domain containing protein, expressed -
3 Sobic.002G121300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSCP56 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
4 Sobic.008G021200 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
5 Sobic.007G208300 peptidase, putative, expressed K14677: aminoacylase
6 Sobic.008G095400 - -
7 Sobic.001G025800 pentatricopeptide, putative, expressed -
8 Sobic.005G117300 ABC transporter, ATP-binding protein, putative, expressed -
9 Sobic.008G090900 expressed protein -
10 Sobic.002G291400 nicotinate-nucleotide pyrophosphorylase, putative, expressed K00767: nadC, nicotinate-nucleotide pyrophosphorylase (carboxylating)
11 Sobic.003G085000 sufB/sufD domain containing protein, putative, expressed K09015: Fe-S cluster assembly protein SufD
12 Sobic.003G267500 expressed protein -
13 Sobic.002G056800 YGGT family protein, putative, expressed -
14 Sobic.010G080300 peptidase, putative, expressed K01436: amidohydrolase
15 Sobic.010G204900 formamidopyrimidine-DNA glycosylase, putative, expressed K10563: mutM, formamidopyrimidine-DNA glycosylase
16 Sobic.009G005400 ABC transporter, ATP-binding protein, putative, expressed -
17 Sobic.003G225100 uroporphyrinogen decarboxylase, putative, expressed K01599: hemE, uroporphyrinogen decarboxylase
18 Sobic.003G022300 SOUL heme-binding protein, putative, expressed -
19 Sobic.001G291900 expressed protein -
20 Sobic.001G495200 Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)


Gene co-expression network
sample Sobic003G260900 Sobic003G260900 Sobic009G155600 Sobic009G155600 Sobic003G260900--Sobic009G155600 Sobic001G513800 Sobic001G513800 Sobic003G260900--Sobic001G513800 Sobic002G121300 Sobic002G121300 Sobic003G260900--Sobic002G121300 Sobic008G021200 Sobic008G021200 Sobic003G260900--Sobic008G021200 Sobic007G208300 Sobic007G208300 Sobic003G260900--Sobic007G208300 Sobic008G095400 Sobic008G095400 Sobic003G260900--Sobic008G095400 Sobic001G025800 Sobic001G025800 Sobic003G260900--Sobic001G025800 Sobic005G117300 Sobic005G117300 Sobic003G260900--Sobic005G117300 Sobic008G090900 Sobic008G090900 Sobic003G260900--Sobic008G090900 Sobic009G155600--Sobic003G260900 Sobic006G067500 Sobic006G067500 Sobic009G155600--Sobic006G067500 Sobic009G155600--Sobic008G095400 Sobic009G155600--Sobic001G513800 Sobic009G155600--Sobic001G025800 Sobic009G155600--Sobic007G208300 Sobic004G064300 Sobic004G064300 Sobic009G155600--Sobic004G064300 Sobic001G033100 Sobic001G033100 Sobic009G155600--Sobic001G033100 Sobic008G050400 Sobic008G050400 Sobic009G155600--Sobic008G050400 Sobic001G495200 Sobic001G495200 Sobic001G513800--Sobic001G495200 Sobic001G513800--Sobic001G025800 Sobic001G513800--Sobic008G050400 Sobic005G143500 Sobic005G143500 Sobic001G513800--Sobic005G143500 Sobic001G513800--Sobic005G117300 Sobic002G048200 Sobic002G048200 Sobic001G513800--Sobic002G048200 Sobic004G336000 Sobic004G336000 Sobic001G513800--Sobic004G336000 Sobic001G513800--Sobic004G064300 Sobic004G065300 Sobic004G065300 Sobic001G513800--Sobic004G065300 Sobic002G121300--Sobic003G260900 Sobic001G295300 Sobic001G295300 Sobic002G121300--Sobic001G295300 Sobic003G085000 Sobic003G085000 Sobic002G121300--Sobic003G085000 Sobic004G228200 Sobic004G228200 Sobic002G121300--Sobic004G228200 Sobic002G121300--Sobic007G208300 Sobic006G145500 Sobic006G145500 Sobic002G121300--Sobic006G145500 Sobic002G121300--Sobic008G090900 Sobic008G067100 Sobic008G067100 Sobic002G121300--Sobic008G067100 Sobic009G093900 Sobic009G093900 Sobic002G121300--Sobic009G093900 Sobic005G018800 Sobic005G018800 Sobic008G021200--Sobic005G018800 Sobic004G060100 Sobic004G060100 Sobic008G021200--Sobic004G060100 Sobic003G200800 Sobic003G200800 Sobic008G021200--Sobic003G200800 Sobic009G256000 Sobic009G256000 Sobic008G021200--Sobic009G256000 Sobic007G161200 Sobic007G161200 Sobic008G021200--Sobic007G161200 Sobic004G283600 Sobic004G283600 Sobic008G021200--Sobic004G283600 Sobic006G237200 Sobic006G237200 Sobic008G021200--Sobic006G237200 Sobic005G004100 Sobic005G004100 Sobic008G021200--Sobic005G004100 Sobic002G321400 Sobic002G321400 Sobic008G021200--Sobic002G321400 Sobic001G531400 Sobic001G531400 Sobic007G208300--Sobic001G531400 Sobic001G291900 Sobic001G291900 Sobic007G208300--Sobic001G291900 Sobic007G208300--Sobic003G085000 Sobic007G208300--Sobic004G336000 Sobic004G301200 Sobic004G301200 Sobic007G208300--Sobic004G301200 Sobic007G208300--Sobic001G295300 Sobic001G104800 Sobic001G104800 Sobic007G208300--Sobic001G104800 Sobic006G132000 Sobic006G132000 Sobic007G208300--Sobic006G132000 Sobic004G055500 Sobic004G055500 Sobic007G208300--Sobic004G055500 Sobic008G095400--Sobic001G025800 Sobic008G095400--Sobic001G513800 Sobic003G162900 Sobic003G162900 Sobic008G095400--Sobic003G162900 Sobic008G095400--Sobic009G155600 Sobic007G090537 Sobic007G090537 Sobic008G095400--Sobic007G090537 Sobic002G221600 Sobic002G221600 Sobic008G095400--Sobic002G221600 Sobic006G054300 Sobic006G054300 Sobic008G095400--Sobic006G054300 Sobic010G204900 Sobic010G204900 Sobic008G095400--Sobic010G204900 Sobic010G095200 Sobic010G095200 Sobic008G095400--Sobic010G095200 Sobic004G003900 Sobic004G003900 Sobic001G025800--Sobic004G003900 Sobic001G025800--Sobic005G117300 Sobic001G025800--Sobic001G495200 Sobic001G025800--Sobic002G048200 Sobic009G251000 Sobic009G251000 Sobic001G025800--Sobic009G251000 Sobic001G025800--Sobic001G513800 Sobic003G267500 Sobic003G267500 Sobic001G025800--Sobic003G267500 Sobic007G015300 Sobic007G015300 Sobic001G025800--Sobic007G015300 Sobic009G092900 Sobic009G092900 Sobic001G025800--Sobic009G092900 Sobic005G117300--Sobic004G003900 Sobic005G117300--Sobic009G092900 Sobic009G085200 Sobic009G085200 Sobic005G117300--Sobic009G085200 Sobic005G117300--Sobic001G025800 Sobic005G117300--Sobic008G090900 Sobic005G117300--Sobic004G065300 Sobic001G346600 Sobic001G346600 Sobic005G117300--Sobic001G346600 Sobic005G117300--Sobic001G495200 Sobic005G117300--Sobic007G208300 Sobic008G090900--Sobic004G003900 Sobic008G090900--Sobic009G092900 Sobic002G181132 Sobic002G181132 Sobic008G090900--Sobic002G181132 Sobic001G382800 Sobic001G382800 Sobic008G090900--Sobic001G382800 Sobic008G090900--Sobic008G067100 Sobic003G045300 Sobic003G045300 Sobic008G090900--Sobic003G045300 Sobic001G375000 Sobic001G375000 Sobic008G090900--Sobic001G375000 Sobic003G128400 Sobic003G128400 Sobic008G090900--Sobic003G128400 Sobic006G088000 Sobic006G088000 Sobic008G090900--Sobic006G088000
Octagon: transcription factors


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