Gene annotation
Transcriptome id Sobic.002G056800.1
Synonym YLMG1-2, Sb02g004780, ATYLMG1-2
Functional annotation YGGT family protein, putative, expressed
UniProt C5XB59
Pfam PF02325
Panther DB PTHR33219 PTHR33219:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT4G27990 : YGGT family protein
RAP-DB (Rice) LOC_Os07g08770.1 : YGGT family protein, putative, expressed
MaizeGDB (Corn) Zm00025a045209
Brachypodium PNT76882 , PNT76881 , KQK20539
Barley HORVU2Hr1G041540.2 , HORVU2Hr1G041540.3 , HORVU2Hr1G041540.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G196200 CRS1/YhbY domain containing protein, expressed -
2 Sobic.003G310100 ABC transporter, ATP-binding protein, putative, expressed -
3 Sobic.002G424100 parvulin-type peptidyl prolyl cis/trans isomerase, putative, expressed -
4 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
5 Sobic.009G131600 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
6 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
7 Sobic.003G085000 sufB/sufD domain containing protein, putative, expressed K09015: Fe-S cluster assembly protein SufD
8 Sobic.002G131700 RNA recognition motif containing protein, putative, expressed -
9 Sobic.001G281500 OsClp11 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
10 Sobic.003G444500 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
11 Sobic.001G295300 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
12 Sobic.002G297400 tetratricopeptide repeat domain containing protein, expressed -
13 Sobic.001G489800 HNH endonuclease domain-containing protein, putative, expressed -
14 Sobic.001G447700 expressed protein -
15 Sobic.003G432500 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed K03110: fused signal recognition particle receptor
16 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
17 Sobic.006G111600 cell division protease ftsH homolog 4, putative, expressed -
18 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
19 Sobic.009G028400 expressed protein -
20 Sobic.004G179200 expressed protein -


Gene co-expression network
sample Sobic002G056800 Sobic002G056800 Sobic001G196200 Sobic001G196200 Sobic002G056800--Sobic001G196200 Sobic003G310100 Sobic003G310100 Sobic002G056800--Sobic003G310100 Sobic002G424100 Sobic002G424100 Sobic002G056800--Sobic002G424100 Sobic005G002900 Sobic005G002900 Sobic002G056800--Sobic005G002900 Sobic009G131600 Sobic009G131600 Sobic002G056800--Sobic009G131600 Sobic006G055800 Sobic006G055800 Sobic002G056800--Sobic006G055800 Sobic003G085000 Sobic003G085000 Sobic002G056800--Sobic003G085000 Sobic002G131700 Sobic002G131700 Sobic002G056800--Sobic002G131700 Sobic001G281500 Sobic001G281500 Sobic002G056800--Sobic001G281500 Sobic001G196200--Sobic002G056800 Sobic001G196200--Sobic002G131700 Sobic003G254600 Sobic003G254600 Sobic001G196200--Sobic003G254600 Sobic001G196200--Sobic003G310100 Sobic006G111600 Sobic006G111600 Sobic001G196200--Sobic006G111600 Sobic001G196200--Sobic005G002900 Sobic009G028400 Sobic009G028400 Sobic001G196200--Sobic009G028400 Sobic004G179200 Sobic004G179200 Sobic001G196200--Sobic004G179200 Sobic001G196200--Sobic002G424100 Sobic001G424300 Sobic001G424300 Sobic003G310100--Sobic001G424300 Sobic003G310100--Sobic002G056800 Sobic003G310100--Sobic001G196200 Sobic001G489800 Sobic001G489800 Sobic003G310100--Sobic001G489800 Sobic001G437200 Sobic001G437200 Sobic003G310100--Sobic001G437200 Sobic003G310100--Sobic001G281500 Sobic006G237100 Sobic006G237100 Sobic003G310100--Sobic006G237100 Sobic003G310100--Sobic002G424100 Sobic003G310100--Sobic006G111600 Sobic002G424100--Sobic003G085000 Sobic002G424100--Sobic005G002900 Sobic002G424100--Sobic002G056800 Sobic002G424100--Sobic002G131700 Sobic002G424100--Sobic003G310100 Sobic002G424100--Sobic006G111600 Sobic001G531400 Sobic001G531400 Sobic002G424100--Sobic001G531400 Sobic002G424100--Sobic009G028400 Sobic001G291900 Sobic001G291900 Sobic002G424100--Sobic001G291900 Sobic001G083100 Sobic001G083100 Sobic005G002900--Sobic001G083100 Sobic005G002900--Sobic006G055800 Sobic009G148500 Sobic009G148500 Sobic005G002900--Sobic009G148500 Sobic001G469933 Sobic001G469933 Sobic005G002900--Sobic001G469933 Sobic005G002900--Sobic001G291900 Sobic006G106400 Sobic006G106400 Sobic005G002900--Sobic006G106400 Sobic003G432500 Sobic003G432500 Sobic005G002900--Sobic003G432500 Sobic003G232700 Sobic003G232700 Sobic005G002900--Sobic003G232700 Sobic005G002900--Sobic002G131700 Sobic009G131600--Sobic006G055800 Sobic007G171800 Sobic007G171800 Sobic009G131600--Sobic007G171800 Sobic010G035200 Sobic010G035200 Sobic009G131600--Sobic010G035200 Sobic003G324700 Sobic003G324700 Sobic009G131600--Sobic003G324700 Sobic009G131600--Sobic002G131700 Sobic003G128400 Sobic003G128400 Sobic009G131600--Sobic003G128400 Sobic007G090400 Sobic007G090400 Sobic009G131600--Sobic007G090400 Sobic009G131600--Sobic005G002900 Sobic009G131600--Sobic002G056800 Sobic006G055800--Sobic003G432500 Sobic006G055800--Sobic003G324700 Sobic006G055800--Sobic005G002900 Sobic006G055800--Sobic001G469933 Sobic001G368500 Sobic001G368500 Sobic006G055800--Sobic001G368500 Sobic006G055800--Sobic009G148500 Sobic002G152800 Sobic002G152800 Sobic006G055800--Sobic002G152800 Sobic006G055800--Sobic001G083100 Sobic005G110400 Sobic005G110400 Sobic006G055800--Sobic005G110400 Sobic006G256600 Sobic006G256600 Sobic003G085000--Sobic006G256600 Sobic003G085000--Sobic001G291900 Sobic003G085000--Sobic006G055800 Sobic010G255100 Sobic010G255100 Sobic003G085000--Sobic010G255100 Sobic004G336000 Sobic004G336000 Sobic003G085000--Sobic004G336000 Sobic003G085000--Sobic001G531400 Sobic003G085000--Sobic005G002900 Sobic001G104800 Sobic001G104800 Sobic003G085000--Sobic001G104800 Sobic004G065300 Sobic004G065300 Sobic003G085000--Sobic004G065300 Sobic002G131700--Sobic004G179200 Sobic003G330100 Sobic003G330100 Sobic002G131700--Sobic003G330100 Sobic002G131700--Sobic006G111600 Sobic002G131700--Sobic007G171800 Sobic002G131700--Sobic005G002900 Sobic002G131700--Sobic010G035200 Sobic003G221700 Sobic003G221700 Sobic002G131700--Sobic003G221700 Sobic002G131700--Sobic001G469933 Sobic002G131700--Sobic001G083100 Sobic001G281500--Sobic006G237100 Sobic007G116100 Sobic007G116100 Sobic001G281500--Sobic007G116100 Sobic006G107600 Sobic006G107600 Sobic001G281500--Sobic006G107600 Sobic001G099000 Sobic001G099000 Sobic001G281500--Sobic001G099000 Sobic001G375000 Sobic001G375000 Sobic001G281500--Sobic001G375000 Sobic001G281500--Sobic007G171800 Sobic006G263800 Sobic006G263800 Sobic001G281500--Sobic006G263800 Sobic010G027200 Sobic010G027200 Sobic001G281500--Sobic010G027200 Sobic005G184300 Sobic005G184300 Sobic001G281500--Sobic005G184300
Octagon: transcription factors


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