Gene annotation
Transcriptome id Sobic.004G056800.1
Synonym LCR74, PDF2.5
Functional annotation DEFL1 - Defensin and Defensin-like DEFL family, expressed
UniProt A0A194YMW2
Pfam PF00304
Panther DB PTHR33147 PTHR33147:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G63660 : Scorpion toxin-like knottin superfamily protein
RAP-DB (Rice) LOC_Os02g07550.1 : DEFL1 - Defensin and Defensin-like DEFL family, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G018700 expressed protein -
2 Sobic.002G095600 metal transporter Nramp6, putative, expressed -
3 Sobic.010G109800 - -
4 Sobic.006G079800 OsFBX199 - F-box domain containing protein, expressed -
5 Sobic.010G034600 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.007G226500 spotted leaf 11, putative, expressed -
7 Sobic.005G076800 OsFBX412 - F-box domain containing protein, expressed -
8 Sobic.002G304600 expressed protein -
9 Sobic.003G421000 - -
10 Sobic.001G307500 - -
11 Sobic.001G257200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
12 Sobic.004G004800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Invertase genes(PubMedID : 24456189)@Up-reguralion under drought(PubMedID : 24916767)@Sugar degradation(PubMedID : 27330561)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
13 Sobic.004G138450 - -
14 Sobic.006G089800 OsFBX103 - F-box domain containing protein, expressed -
15 Sobic.003G024400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
16 Sobic.003G198900 protein phosphatase 2C, putative, expressed -
17 Sobic.003G036650 - -
18 Sobic.001G106800 DUF221 domain containing protein, expressed -
19 Sobic.004G242850 - -
20 Sobic.006G109100 class I glutamine amidotransferase, putative, expressed K01658: anthranilate synthase component II


Gene co-expression network
sample Sobic004G056800 Sobic004G056800 Sobic008G018700 Sobic008G018700 Sobic004G056800--Sobic008G018700 Sobic002G095600 Sobic002G095600 Sobic004G056800--Sobic002G095600 Sobic010G109800 Sobic010G109800 Sobic004G056800--Sobic010G109800 Sobic006G079800 Sobic006G079800 Sobic004G056800--Sobic006G079800 Sobic010G034600 Sobic010G034600 Sobic004G056800--Sobic010G034600 Sobic007G226500 Sobic007G226500 Sobic004G056800--Sobic007G226500 Sobic005G076800 Sobic005G076800 Sobic004G056800--Sobic005G076800 Sobic002G304600 Sobic002G304600 Sobic004G056800--Sobic002G304600 Sobic003G421000 Sobic003G421000 Sobic004G056800--Sobic003G421000 Sobic008G018700--Sobic004G056800 Sobic008G018700--Sobic010G109800 Sobic008G018700--Sobic003G421000 Sobic008G018700--Sobic002G095600 Sobic008G018700--Sobic007G226500 Sobic008G018700--Sobic006G079800 Sobic001G067700 Sobic001G067700 Sobic008G018700--Sobic001G067700 Sobic001G257200 Sobic001G257200 Sobic008G018700--Sobic001G257200 Sobic001G307500 Sobic001G307500 Sobic008G018700--Sobic001G307500 Sobic002G095600--Sobic001G257200 Sobic002G095600--Sobic010G109800 Sobic002G095600--Sobic001G307500 Sobic002G095600--Sobic002G304600 Sobic002G095600--Sobic005G076800 Sobic002G192800 Sobic002G192800 Sobic002G095600--Sobic002G192800 Sobic003G024400 Sobic003G024400 Sobic002G095600--Sobic003G024400 Sobic006G089800 Sobic006G089800 Sobic002G095600--Sobic006G089800 Sobic002G095600--Sobic004G056800 Sobic010G109800--Sobic001G307500 Sobic010G109800--Sobic001G257200 Sobic010G109800--Sobic006G079800 Sobic010G109800--Sobic005G076800 Sobic010G109800--Sobic003G024400 Sobic001G106800 Sobic001G106800 Sobic010G109800--Sobic001G106800 Sobic006G204400 Sobic006G204400 Sobic010G109800--Sobic006G204400 Sobic010G109800--Sobic002G095600 Sobic010G109800--Sobic002G192800 Sobic006G079800--Sobic010G109800 Sobic006G079800--Sobic001G257200 Sobic006G079800--Sobic001G307500 Sobic006G079800--Sobic005G076800 Sobic001G398200 Sobic001G398200 Sobic006G079800--Sobic001G398200 Sobic006G079800--Sobic001G106800 Sobic006G079800--Sobic003G024400 Sobic009G044700 Sobic009G044700 Sobic006G079800--Sobic009G044700 Sobic002G180800 Sobic002G180800 Sobic006G079800--Sobic002G180800 Sobic010G034600--Sobic004G056800 Sobic010G034600--Sobic003G421000 Sobic010G034600--Sobic008G018700 Sobic001G323701 Sobic001G323701 Sobic010G034600--Sobic001G323701 Sobic010G034600--Sobic007G226500 Sobic002G098900 Sobic002G098900 Sobic010G034600--Sobic002G098900 Sobic010G034600--Sobic010G109800 Sobic010G034600--Sobic006G079800 Sobic010G034600--Sobic001G067700 Sobic007G226500--Sobic010G109800 Sobic003G431800 Sobic003G431800 Sobic007G226500--Sobic003G431800 Sobic007G226500--Sobic009G044700 Sobic007G226500--Sobic006G079800 Sobic007G226500--Sobic005G076800 Sobic007G226500--Sobic003G024400 Sobic010G149800 Sobic010G149800 Sobic007G226500--Sobic010G149800 Sobic007G226500--Sobic008G018700 Sobic002G011900 Sobic002G011900 Sobic007G226500--Sobic002G011900 Sobic005G076800--Sobic001G106800 Sobic002G111100 Sobic002G111100 Sobic005G076800--Sobic002G111100 Sobic009G229400 Sobic009G229400 Sobic005G076800--Sobic009G229400 Sobic010G124900 Sobic010G124900 Sobic005G076800--Sobic010G124900 Sobic005G076800--Sobic001G307500 Sobic005G076800--Sobic006G204400 Sobic010G003200 Sobic010G003200 Sobic005G076800--Sobic010G003200 Sobic004G046800 Sobic004G046800 Sobic005G076800--Sobic004G046800 Sobic005G076800--Sobic002G192800 Sobic002G304600--Sobic002G095600 Sobic002G304600--Sobic001G257200 Sobic002G304600--Sobic010G109800 Sobic010G104600 Sobic010G104600 Sobic002G304600--Sobic010G104600 Sobic002G304600--Sobic006G079800 Sobic002G304600--Sobic006G089800 Sobic002G304600--Sobic002G192800 Sobic002G304600--Sobic003G024400 Sobic002G304600--Sobic001G307500 Sobic003G421000--Sobic008G018700 Sobic003G291800 Sobic003G291800 Sobic003G421000--Sobic003G291800 Sobic003G421000--Sobic010G109800 Sobic003G421000--Sobic006G079800 Sobic008G069300 Sobic008G069300 Sobic003G421000--Sobic008G069300 Sobic003G044300 Sobic003G044300 Sobic003G421000--Sobic003G044300 Sobic003G421000--Sobic010G034600 Sobic003G421000--Sobic001G257200 Sobic003G163301 Sobic003G163301 Sobic003G421000--Sobic003G163301
Octagon: transcription factors


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