Gene annotation
Transcriptome id Sobic.008G018700.1
Synonym
Functional annotation expressed protein
UniProt H0I4D4 , A0A1B6PAW7
Pfam PF00560 PF13855
Panther DB PTHR27004 PTHR27004:SF36
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G34930 : disease resistance family protein / LRR family protein
RAP-DB (Rice) LOC_Os01g41780.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G056800 DEFL1 - Defensin and Defensin-like DEFL family, expressed -
2 Sobic.010G109800 - -
3 Sobic.003G421000 - -
4 Sobic.002G095600 metal transporter Nramp6, putative, expressed -
5 Sobic.007G226500 spotted leaf 11, putative, expressed -
6 Sobic.006G079800 OsFBX199 - F-box domain containing protein, expressed -
7 Sobic.001G067700 amine oxidase-related, putative, expressed -
8 Sobic.001G257200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
9 Sobic.001G307500 - -
10 Sobic.010G034600 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.005G076800 OsFBX412 - F-box domain containing protein, expressed -
12 Sobic.002G304600 expressed protein -
13 Sobic.003G036650 - -
14 Sobic.003G010800 C4-dicarboxylate transporter/malic acid transport protein, expressed -
15 Sobic.006G109100 class I glutamine amidotransferase, putative, expressed K01658: anthranilate synthase component II
16 Sobic.003G431800 nonsense-mediated mRNA decay protein 3, putative, expressed K07562: nonsense-mediated mRNA decay protein 3
17 Sobic.003G198900 protein phosphatase 2C, putative, expressed -
18 Sobic.003G024400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
19 Sobic.003G433400 OsDegp14 - Putative Deg protease homologue, expressed -
20 Sobic.004G138450 - -


Gene co-expression network
sample Sobic008G018700 Sobic008G018700 Sobic004G056800 Sobic004G056800 Sobic008G018700--Sobic004G056800 Sobic010G109800 Sobic010G109800 Sobic008G018700--Sobic010G109800 Sobic003G421000 Sobic003G421000 Sobic008G018700--Sobic003G421000 Sobic002G095600 Sobic002G095600 Sobic008G018700--Sobic002G095600 Sobic007G226500 Sobic007G226500 Sobic008G018700--Sobic007G226500 Sobic006G079800 Sobic006G079800 Sobic008G018700--Sobic006G079800 Sobic001G067700 Sobic001G067700 Sobic008G018700--Sobic001G067700 Sobic001G257200 Sobic001G257200 Sobic008G018700--Sobic001G257200 Sobic001G307500 Sobic001G307500 Sobic008G018700--Sobic001G307500 Sobic004G056800--Sobic008G018700 Sobic004G056800--Sobic002G095600 Sobic004G056800--Sobic010G109800 Sobic004G056800--Sobic006G079800 Sobic010G034600 Sobic010G034600 Sobic004G056800--Sobic010G034600 Sobic004G056800--Sobic007G226500 Sobic005G076800 Sobic005G076800 Sobic004G056800--Sobic005G076800 Sobic002G304600 Sobic002G304600 Sobic004G056800--Sobic002G304600 Sobic004G056800--Sobic003G421000 Sobic010G109800--Sobic001G307500 Sobic010G109800--Sobic001G257200 Sobic010G109800--Sobic006G079800 Sobic010G109800--Sobic005G076800 Sobic003G024400 Sobic003G024400 Sobic010G109800--Sobic003G024400 Sobic001G106800 Sobic001G106800 Sobic010G109800--Sobic001G106800 Sobic006G204400 Sobic006G204400 Sobic010G109800--Sobic006G204400 Sobic010G109800--Sobic002G095600 Sobic002G192800 Sobic002G192800 Sobic010G109800--Sobic002G192800 Sobic003G421000--Sobic008G018700 Sobic003G291800 Sobic003G291800 Sobic003G421000--Sobic003G291800 Sobic003G421000--Sobic010G109800 Sobic003G421000--Sobic006G079800 Sobic008G069300 Sobic008G069300 Sobic003G421000--Sobic008G069300 Sobic003G044300 Sobic003G044300 Sobic003G421000--Sobic003G044300 Sobic003G421000--Sobic010G034600 Sobic003G421000--Sobic001G257200 Sobic003G163301 Sobic003G163301 Sobic003G421000--Sobic003G163301 Sobic002G095600--Sobic001G257200 Sobic002G095600--Sobic010G109800 Sobic002G095600--Sobic001G307500 Sobic002G095600--Sobic002G304600 Sobic002G095600--Sobic005G076800 Sobic002G095600--Sobic002G192800 Sobic002G095600--Sobic003G024400 Sobic006G089800 Sobic006G089800 Sobic002G095600--Sobic006G089800 Sobic002G095600--Sobic004G056800 Sobic007G226500--Sobic010G109800 Sobic003G431800 Sobic003G431800 Sobic007G226500--Sobic003G431800 Sobic009G044700 Sobic009G044700 Sobic007G226500--Sobic009G044700 Sobic007G226500--Sobic006G079800 Sobic007G226500--Sobic005G076800 Sobic007G226500--Sobic003G024400 Sobic010G149800 Sobic010G149800 Sobic007G226500--Sobic010G149800 Sobic007G226500--Sobic008G018700 Sobic002G011900 Sobic002G011900 Sobic007G226500--Sobic002G011900 Sobic006G079800--Sobic010G109800 Sobic006G079800--Sobic001G257200 Sobic006G079800--Sobic001G307500 Sobic006G079800--Sobic005G076800 Sobic001G398200 Sobic001G398200 Sobic006G079800--Sobic001G398200 Sobic006G079800--Sobic001G106800 Sobic006G079800--Sobic003G024400 Sobic006G079800--Sobic009G044700 Sobic002G180800 Sobic002G180800 Sobic006G079800--Sobic002G180800 Sobic003G403300 Sobic003G403300 Sobic001G067700--Sobic003G403300 Sobic002G407000 Sobic002G407000 Sobic001G067700--Sobic002G407000 Sobic002G098900 Sobic002G098900 Sobic001G067700--Sobic002G098900 Sobic001G178100 Sobic001G178100 Sobic001G067700--Sobic001G178100 Sobic001G067700--Sobic008G018700 Sobic003G010800 Sobic003G010800 Sobic001G067700--Sobic003G010800 Sobic002G181600 Sobic002G181600 Sobic001G067700--Sobic002G181600 Sobic002G310900 Sobic002G310900 Sobic001G067700--Sobic002G310900 Sobic005G111700 Sobic005G111700 Sobic001G067700--Sobic005G111700 Sobic005G135100 Sobic005G135100 Sobic001G257200--Sobic005G135100 Sobic001G257200--Sobic001G106800 Sobic001G257200--Sobic002G192800 Sobic001G257200--Sobic006G204400 Sobic008G136601 Sobic008G136601 Sobic001G257200--Sobic008G136601 Sobic001G257200--Sobic003G024400 Sobic002G074800 Sobic002G074800 Sobic001G257200--Sobic002G074800 Sobic006G001100 Sobic006G001100 Sobic001G257200--Sobic006G001100 Sobic001G257200--Sobic001G307500 Sobic001G307500--Sobic002G192800 Sobic001G307500--Sobic001G106800 Sobic001G307500--Sobic005G076800 Sobic009G229400 Sobic009G229400 Sobic001G307500--Sobic009G229400 Sobic001G194800 Sobic001G194800 Sobic001G307500--Sobic001G194800 Sobic001G156800 Sobic001G156800 Sobic001G307500--Sobic001G156800 Sobic001G253750 Sobic001G253750 Sobic001G307500--Sobic001G253750 Sobic008G030501 Sobic008G030501 Sobic001G307500--Sobic008G030501 Sobic007G081800 Sobic007G081800 Sobic001G307500--Sobic007G081800
Octagon: transcription factors


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