Gene annotation
Transcriptome id Sobic.010G109800.1
Synonym
Functional annotation -
UniProt A0A194YIE8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G307500 - -
2 Sobic.001G257200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
3 Sobic.006G079800 OsFBX199 - F-box domain containing protein, expressed -
4 Sobic.005G076800 OsFBX412 - F-box domain containing protein, expressed -
5 Sobic.003G024400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
6 Sobic.001G106800 DUF221 domain containing protein, expressed -
7 Sobic.006G204400 maltose excess protein 1-like, chloroplast precursor, putative, expressed -
8 Sobic.002G095600 metal transporter Nramp6, putative, expressed -
9 Sobic.002G192800 - -
10 Sobic.010G124900 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
11 Sobic.009G229400 60S acidic ribosomal protein P0, putative, expressed K02941: RP-LP0, large subunit ribosomal protein LP0
12 Sobic.001G167600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
13 Sobic.006G089800 OsFBX103 - F-box domain containing protein, expressed -
14 Sobic.007G018651 - -
15 Sobic.008G136700 expressed protein -
16 Sobic.002G111100 expressed protein -
17 Sobic.001G398200 MYB family transcription factor, putative, expressed -
18 Sobic.002G074800 - -
19 Sobic.008G069300 - -
20 Sobic.003G431800 nonsense-mediated mRNA decay protein 3, putative, expressed K07562: nonsense-mediated mRNA decay protein 3


Gene co-expression network
sample Sobic010G109800 Sobic010G109800 Sobic001G307500 Sobic001G307500 Sobic010G109800--Sobic001G307500 Sobic001G257200 Sobic001G257200 Sobic010G109800--Sobic001G257200 Sobic006G079800 Sobic006G079800 Sobic010G109800--Sobic006G079800 Sobic005G076800 Sobic005G076800 Sobic010G109800--Sobic005G076800 Sobic003G024400 Sobic003G024400 Sobic010G109800--Sobic003G024400 Sobic001G106800 Sobic001G106800 Sobic010G109800--Sobic001G106800 Sobic006G204400 Sobic006G204400 Sobic010G109800--Sobic006G204400 Sobic002G095600 Sobic002G095600 Sobic010G109800--Sobic002G095600 Sobic002G192800 Sobic002G192800 Sobic010G109800--Sobic002G192800 Sobic001G307500--Sobic002G192800 Sobic001G307500--Sobic001G106800 Sobic001G307500--Sobic005G076800 Sobic009G229400 Sobic009G229400 Sobic001G307500--Sobic009G229400 Sobic001G194800 Sobic001G194800 Sobic001G307500--Sobic001G194800 Sobic001G156800 Sobic001G156800 Sobic001G307500--Sobic001G156800 Sobic001G253750 Sobic001G253750 Sobic001G307500--Sobic001G253750 Sobic008G030501 Sobic008G030501 Sobic001G307500--Sobic008G030501 Sobic007G081800 Sobic007G081800 Sobic001G307500--Sobic007G081800 Sobic005G135100 Sobic005G135100 Sobic001G257200--Sobic005G135100 Sobic001G257200--Sobic001G106800 Sobic001G257200--Sobic002G192800 Sobic001G257200--Sobic006G204400 Sobic008G136601 Sobic008G136601 Sobic001G257200--Sobic008G136601 Sobic001G257200--Sobic003G024400 Sobic002G074800 Sobic002G074800 Sobic001G257200--Sobic002G074800 Sobic006G001100 Sobic006G001100 Sobic001G257200--Sobic006G001100 Sobic001G257200--Sobic001G307500 Sobic006G079800--Sobic010G109800 Sobic006G079800--Sobic001G257200 Sobic006G079800--Sobic001G307500 Sobic006G079800--Sobic005G076800 Sobic001G398200 Sobic001G398200 Sobic006G079800--Sobic001G398200 Sobic006G079800--Sobic001G106800 Sobic006G079800--Sobic003G024400 Sobic009G044700 Sobic009G044700 Sobic006G079800--Sobic009G044700 Sobic002G180800 Sobic002G180800 Sobic006G079800--Sobic002G180800 Sobic005G076800--Sobic001G106800 Sobic002G111100 Sobic002G111100 Sobic005G076800--Sobic002G111100 Sobic005G076800--Sobic009G229400 Sobic010G124900 Sobic010G124900 Sobic005G076800--Sobic010G124900 Sobic005G076800--Sobic001G307500 Sobic005G076800--Sobic006G204400 Sobic010G003200 Sobic010G003200 Sobic005G076800--Sobic010G003200 Sobic004G046800 Sobic004G046800 Sobic005G076800--Sobic004G046800 Sobic005G076800--Sobic002G192800 Sobic003G024400--Sobic001G106800 Sobic003G024400--Sobic006G204400 Sobic007G086900 Sobic007G086900 Sobic003G024400--Sobic007G086900 Sobic006G143900 Sobic006G143900 Sobic003G024400--Sobic006G143900 Sobic001G241401 Sobic001G241401 Sobic003G024400--Sobic001G241401 Sobic002G030300 Sobic002G030300 Sobic003G024400--Sobic002G030300 Sobic003G014200 Sobic003G014200 Sobic003G024400--Sobic003G014200 Sobic005G055700 Sobic005G055700 Sobic003G024400--Sobic005G055700 Sobic003G024400--Sobic002G111100 Sobic001G106800--Sobic002G030300 Sobic001G106800--Sobic002G111100 Sobic002G011300 Sobic002G011300 Sobic001G106800--Sobic002G011300 Sobic009G060000 Sobic009G060000 Sobic001G106800--Sobic009G060000 Sobic003G290500 Sobic003G290500 Sobic001G106800--Sobic003G290500 Sobic001G409000 Sobic001G409000 Sobic001G106800--Sobic001G409000 Sobic007G001800 Sobic007G001800 Sobic001G106800--Sobic007G001800 Sobic004G217200 Sobic004G217200 Sobic001G106800--Sobic004G217200 Sobic004G049300 Sobic004G049300 Sobic001G106800--Sobic004G049300 Sobic006G204400--Sobic001G106800 Sobic006G204400--Sobic006G001100 Sobic007G176900 Sobic007G176900 Sobic006G204400--Sobic007G176900 Sobic006G204400--Sobic008G136601 Sobic006G097400 Sobic006G097400 Sobic006G204400--Sobic006G097400 Sobic006G204400--Sobic002G111100 Sobic001G163666 Sobic001G163666 Sobic006G204400--Sobic001G163666 Sobic008G103250 Sobic008G103250 Sobic006G204400--Sobic008G103250 Sobic006G204400--Sobic001G241401 Sobic002G095600--Sobic001G257200 Sobic002G095600--Sobic010G109800 Sobic002G095600--Sobic001G307500 Sobic002G304600 Sobic002G304600 Sobic002G095600--Sobic002G304600 Sobic002G095600--Sobic005G076800 Sobic002G095600--Sobic002G192800 Sobic002G095600--Sobic003G024400 Sobic006G089800 Sobic006G089800 Sobic002G095600--Sobic006G089800 Sobic004G056800 Sobic004G056800 Sobic002G095600--Sobic004G056800 Sobic002G384900 Sobic002G384900 Sobic002G192800--Sobic002G384900 Sobic006G017900 Sobic006G017900 Sobic002G192800--Sobic006G017900 Sobic006G017700 Sobic006G017700 Sobic002G192800--Sobic006G017700 Sobic002G182701 Sobic002G182701 Sobic002G192800--Sobic002G182701 Sobic001G211700 Sobic001G211700 Sobic002G192800--Sobic001G211700 Sobic004G100300 Sobic004G100300 Sobic002G192800--Sobic004G100300 Sobic005G221675 Sobic005G221675 Sobic002G192800--Sobic005G221675 Sobic004G046700 Sobic004G046700 Sobic002G192800--Sobic004G046700 Sobic005G140900 Sobic005G140900 Sobic002G192800--Sobic005G140900
Octagon: transcription factors


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