Gene annotation
Transcriptome id Sobic.003G198900.1
Synonym Sb03g026120
Functional annotation protein phosphatase 2C, putative, expressed
UniProt C5XPD9
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF286
NCBI CDD KOG0698; Serine/threonine protein phosphatase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT1G16220 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os04g25570.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a038381
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G198900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G250400 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.004G302800 MSP domain containing protein, expressed -
3 Sobic.006G270000 expressed protein -
4 Sobic.001G257800 myosin, putative, expressed K10357: myosin V
5 Sobic.003G024400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
6 Sobic.002G074800 - -
7 Sobic.001G257200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
8 Sobic.008G069300 - -
9 Sobic.004G213300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
10 Sobic.009G148600 DUF803 domain containing, putative, expressed -
11 Sobic.010G109800 - -
12 Sobic.004G082800 GRAM and C2 domains containing protein, putative, expressed -
13 Sobic.003G402800 DUF647 domain containing protein, putative, expressed -
14 Sobic.009G046900 N-acetylglucosaminyltransferase, putative, expressed -
15 Sobic.006G117700 - -
16 Sobic.005G048500 serine esterase family protein, putative, expressed -
17 Sobic.001G475300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
18 Sobic.003G428000 expressed protein -
19 Sobic.004G261700 ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed -
20 Sobic.004G064200 STE_PAK_Ste20_STLK.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39


Gene co-expression network
sample Sobic003G198900 Sobic003G198900 Sobic003G250400 Sobic003G250400 Sobic003G198900--Sobic003G250400 Sobic004G302800 Sobic004G302800 Sobic003G198900--Sobic004G302800 Sobic006G270000 Sobic006G270000 Sobic003G198900--Sobic006G270000 Sobic001G257800 Sobic001G257800 Sobic003G198900--Sobic001G257800 Sobic003G024400 Sobic003G024400 Sobic003G198900--Sobic003G024400 Sobic002G074800 Sobic002G074800 Sobic003G198900--Sobic002G074800 Sobic001G257200 Sobic001G257200 Sobic003G198900--Sobic001G257200 Sobic008G069300 Sobic008G069300 Sobic003G198900--Sobic008G069300 Sobic004G213300 Sobic004G213300 Sobic003G198900--Sobic004G213300 Sobic001G475300 Sobic001G475300 Sobic003G250400--Sobic001G475300 Sobic003G250400--Sobic003G198900 Sobic003G250400--Sobic001G257800 Sobic003G428000 Sobic003G428000 Sobic003G250400--Sobic003G428000 Sobic004G082800 Sobic004G082800 Sobic003G250400--Sobic004G082800 Sobic010G024400 Sobic010G024400 Sobic003G250400--Sobic010G024400 Sobic010G181600 Sobic010G181600 Sobic003G250400--Sobic010G181600 Sobic003G117800 Sobic003G117800 Sobic003G250400--Sobic003G117800 Sobic001G141400 Sobic001G141400 Sobic003G250400--Sobic001G141400 Sobic004G302800--Sobic003G198900 Sobic004G302800--Sobic003G250400 Sobic004G302800--Sobic001G475300 Sobic004G302800--Sobic004G213300 Sobic004G302800--Sobic001G257800 Sobic003G402800 Sobic003G402800 Sobic004G302800--Sobic003G402800 Sobic003G405600 Sobic003G405600 Sobic004G302800--Sobic003G405600 Sobic008G055500 Sobic008G055500 Sobic004G302800--Sobic008G055500 Sobic004G302800--Sobic001G141400 Sobic006G270000--Sobic003G024400 Sobic009G148600 Sobic009G148600 Sobic006G270000--Sobic009G148600 Sobic005G048500 Sobic005G048500 Sobic006G270000--Sobic005G048500 Sobic006G270000--Sobic002G074800 Sobic006G204400 Sobic006G204400 Sobic006G270000--Sobic006G204400 Sobic006G193400 Sobic006G193400 Sobic006G270000--Sobic006G193400 Sobic010G149800 Sobic010G149800 Sobic006G270000--Sobic010G149800 Sobic004G228300 Sobic004G228300 Sobic006G270000--Sobic004G228300 Sobic006G270000--Sobic003G198900 Sobic001G257800--Sobic003G402800 Sobic003G385300 Sobic003G385300 Sobic001G257800--Sobic003G385300 Sobic010G134650 Sobic010G134650 Sobic001G257800--Sobic010G134650 Sobic004G064200 Sobic004G064200 Sobic001G257800--Sobic004G064200 Sobic001G257800--Sobic010G024400 Sobic004G176200 Sobic004G176200 Sobic001G257800--Sobic004G176200 Sobic001G257800--Sobic002G074800 Sobic004G261700 Sobic004G261700 Sobic001G257800--Sobic004G261700 Sobic008G152700 Sobic008G152700 Sobic001G257800--Sobic008G152700 Sobic001G106800 Sobic001G106800 Sobic003G024400--Sobic001G106800 Sobic003G024400--Sobic006G204400 Sobic007G086900 Sobic007G086900 Sobic003G024400--Sobic007G086900 Sobic006G143900 Sobic006G143900 Sobic003G024400--Sobic006G143900 Sobic001G241401 Sobic001G241401 Sobic003G024400--Sobic001G241401 Sobic002G030300 Sobic002G030300 Sobic003G024400--Sobic002G030300 Sobic003G014200 Sobic003G014200 Sobic003G024400--Sobic003G014200 Sobic005G055700 Sobic005G055700 Sobic003G024400--Sobic005G055700 Sobic002G111100 Sobic002G111100 Sobic003G024400--Sobic002G111100 Sobic002G074800--Sobic004G064200 Sobic006G001100 Sobic006G001100 Sobic002G074800--Sobic006G001100 Sobic002G074800--Sobic006G204400 Sobic008G136601 Sobic008G136601 Sobic002G074800--Sobic008G136601 Sobic010G114200 Sobic010G114200 Sobic002G074800--Sobic010G114200 Sobic002G074800--Sobic006G143900 Sobic002G074800--Sobic004G228300 Sobic002G074800--Sobic005G048500 Sobic008G136700 Sobic008G136700 Sobic002G074800--Sobic008G136700 Sobic005G135100 Sobic005G135100 Sobic001G257200--Sobic005G135100 Sobic001G257200--Sobic001G106800 Sobic002G192800 Sobic002G192800 Sobic001G257200--Sobic002G192800 Sobic001G257200--Sobic006G204400 Sobic001G257200--Sobic008G136601 Sobic001G257200--Sobic003G024400 Sobic001G257200--Sobic002G074800 Sobic001G257200--Sobic006G001100 Sobic001G307500 Sobic001G307500 Sobic001G257200--Sobic001G307500 Sobic009G046900 Sobic009G046900 Sobic008G069300--Sobic009G046900 Sobic008G069300--Sobic002G074800 Sobic008G069300--Sobic003G428000 Sobic008G069300--Sobic009G148600 Sobic010G109800 Sobic010G109800 Sobic008G069300--Sobic010G109800 Sobic009G229400 Sobic009G229400 Sobic008G069300--Sobic009G229400 Sobic008G069300--Sobic003G198900 Sobic009G156800 Sobic009G156800 Sobic008G069300--Sobic009G156800 Sobic008G069300--Sobic006G270000 Sobic004G213300--Sobic003G198900 Sobic004G213300--Sobic004G302800 Sobic004G213300--Sobic001G475300 Sobic004G213300--Sobic003G250400 Sobic003G134300 Sobic003G134300 Sobic004G213300--Sobic003G134300 Sobic004G198600 Sobic004G198600 Sobic004G213300--Sobic004G198600 Sobic003G243800 Sobic003G243800 Sobic004G213300--Sobic003G243800 Sobic007G172700 Sobic007G172700 Sobic004G213300--Sobic007G172700 Sobic004G213300--Sobic008G055500
Octagon: transcription factors


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