Gene annotation
Transcriptome id Sobic.004G082800.1,Sobic.004G082800.2
Synonym Sb04g006820
Functional annotation GRAM and C2 domains containing protein, putative, expressed
UniProt A0A194YNG1 , A0A194YNH4
Pfam PF02893 PF00168 PF16016 PF02893 PF16016 PF00168
Panther DB PTHR10774 PTHR10774:SF93
NCBI CDD KOG1032; Uncharacterized conserved protein, contains GRAM domain
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G03370 : C2 calcium/lipid-binding and GRAM domain containing protein
RAP-DB (Rice) LOC_Os02g10630.1 : GRAM and C2 domains containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a019577
Brachypodium PNT66110 , PNT66111 , PNT66112 , PNT75657 , KQK17732 , KQJ93900 , KQJ93901
Barley HORVU6Hr1G032560.2 , HORVU6Hr1G032560.3 , HORVU6Hr1G032560.1 , HORVU6Hr1G032560.4 , HORVU6Hr1G032560.5
Wheat TraesCS6A02G162600 , TraesCS6B02G188600 , TraesCS6D02G149600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G117700 - -
2 Sobic.010G024400 expressed protein -
3 Sobic.010G202200 - -
4 Sobic.010G130601 - -
5 Sobic.005G110424 - -
6 Sobic.009G230800 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@inhibiting the nuclear localization of BRASSINOSTEROID INSENSITIVE 2(PubMedID : 28273925)@decreased the cell proliferation rates(PubMedID : 27329702)@gibberellin 2-beta-dioxygenase, putative, expressed K04125: gibberellin 2beta-dioxygenase
7 Sobic.001G024400 pectinesterase inhibitor domain containing protein, expressed -
8 Sobic.004G064200 STE_PAK_Ste20_STLK.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
9 Sobic.001G519600 - -
10 Sobic.002G233600 glycogen operon protein glgX, putative, expressed K01214: ISA, isoamylase
11 Sobic.009G061500 - -
12 Sobic.006G001100 ELMO/CED-12 family protein, putative, expressed -
13 Sobic.001G340800 exocyst complex component 6, putative, expressed -
14 Sobic.006G071362 - K02021: putative ABC transport system ATP-binding protein
15 Sobic.003G236000 CGMC_MAPKCMGC_2.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
16 Sobic.001G405100 BTBT1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed -
17 Sobic.002G074800 - -
18 Sobic.006G027601 - -
19 Sobic.007G039200 MYB family transcription factor, putative, expressed -
20 Sobic.008G136601 - -


Gene co-expression network
sample Sobic004G082800 Sobic004G082800 Sobic006G117700 Sobic006G117700 Sobic004G082800--Sobic006G117700 Sobic010G024400 Sobic010G024400 Sobic004G082800--Sobic010G024400 Sobic010G202200 Sobic010G202200 Sobic004G082800--Sobic010G202200 Sobic010G130601 Sobic010G130601 Sobic004G082800--Sobic010G130601 Sobic005G110424 Sobic005G110424 Sobic004G082800--Sobic005G110424 Sobic009G230800 Sobic009G230800 Sobic004G082800--Sobic009G230800 Sobic001G024400 Sobic001G024400 Sobic004G082800--Sobic001G024400 Sobic004G064200 Sobic004G064200 Sobic004G082800--Sobic004G064200 Sobic001G519600 Sobic001G519600 Sobic004G082800--Sobic001G519600 Sobic006G117700--Sobic004G082800 Sobic006G117700--Sobic010G202200 Sobic001G405100 Sobic001G405100 Sobic006G117700--Sobic001G405100 Sobic003G156900 Sobic003G156900 Sobic006G117700--Sobic003G156900 Sobic006G027601 Sobic006G027601 Sobic006G117700--Sobic006G027601 Sobic006G117700--Sobic005G110424 Sobic006G001100 Sobic006G001100 Sobic006G117700--Sobic006G001100 Sobic001G340800 Sobic001G340800 Sobic006G117700--Sobic001G340800 Sobic009G061500 Sobic009G061500 Sobic006G117700--Sobic009G061500 Sobic010G024400--Sobic010G202200 Sobic010G024400--Sobic009G230800 Sobic003G236000 Sobic003G236000 Sobic010G024400--Sobic003G236000 Sobic010G024400--Sobic004G064200 Sobic010G024400--Sobic001G519600 Sobic006G269101 Sobic006G269101 Sobic010G024400--Sobic006G269101 Sobic008G148600 Sobic008G148600 Sobic010G024400--Sobic008G148600 Sobic005G225500 Sobic005G225500 Sobic010G024400--Sobic005G225500 Sobic010G024400--Sobic001G024400 Sobic010G202200--Sobic009G230800 Sobic010G202200--Sobic006G269101 Sobic010G202200--Sobic008G148600 Sobic008G136601 Sobic008G136601 Sobic010G202200--Sobic008G136601 Sobic010G202200--Sobic001G340800 Sobic010G202200--Sobic006G027601 Sobic010G202200--Sobic005G110424 Sobic010G202200--Sobic003G156900 Sobic008G097966 Sobic008G097966 Sobic010G202200--Sobic008G097966 Sobic010G124900 Sobic010G124900 Sobic010G130601--Sobic010G124900 Sobic010G130601--Sobic006G117700 Sobic010G130601--Sobic001G405100 Sobic002G111100 Sobic002G111100 Sobic010G130601--Sobic002G111100 Sobic001G167600 Sobic001G167600 Sobic010G130601--Sobic001G167600 Sobic006G177700 Sobic006G177700 Sobic010G130601--Sobic006G177700 Sobic003G024100 Sobic003G024100 Sobic010G130601--Sobic003G024100 Sobic010G130601--Sobic008G136601 Sobic010G130601--Sobic006G001100 Sobic005G110424--Sobic003G156900 Sobic005G185900 Sobic005G185900 Sobic005G110424--Sobic005G185900 Sobic005G110424--Sobic008G148600 Sobic005G110424--Sobic009G061500 Sobic005G110424--Sobic006G027601 Sobic005G054401 Sobic005G054401 Sobic005G110424--Sobic005G054401 Sobic003G175000 Sobic003G175000 Sobic005G110424--Sobic003G175000 Sobic005G110424--Sobic008G136601 Sobic001G094700 Sobic001G094700 Sobic005G110424--Sobic001G094700 Sobic009G230800--Sobic010G202200 Sobic009G230800--Sobic006G269101 Sobic004G052600 Sobic004G052600 Sobic009G230800--Sobic004G052600 Sobic009G230800--Sobic008G136601 Sobic009G230800--Sobic001G340800 Sobic004G328500 Sobic004G328500 Sobic009G230800--Sobic004G328500 Sobic009G230800--Sobic008G148600 Sobic005G000900 Sobic005G000900 Sobic009G230800--Sobic005G000900 Sobic005G221675 Sobic005G221675 Sobic009G230800--Sobic005G221675 Sobic006G143700 Sobic006G143700 Sobic001G024400--Sobic006G143700 Sobic001G024400--Sobic008G148600 Sobic001G024400--Sobic006G269101 Sobic001G024400--Sobic010G202200 Sobic001G024400--Sobic009G230800 Sobic001G024400--Sobic008G136601 Sobic001G024400--Sobic005G110424 Sobic001G024400--Sobic006G027601 Sobic001G024400--Sobic003G175000 Sobic010G114200 Sobic010G114200 Sobic004G064200--Sobic010G114200 Sobic003G014200 Sobic003G014200 Sobic004G064200--Sobic003G014200 Sobic006G143900 Sobic006G143900 Sobic004G064200--Sobic006G143900 Sobic010G179600 Sobic010G179600 Sobic004G064200--Sobic010G179600 Sobic009G068400 Sobic009G068400 Sobic004G064200--Sobic009G068400 Sobic001G117100 Sobic001G117100 Sobic004G064200--Sobic001G117100 Sobic001G225800 Sobic001G225800 Sobic004G064200--Sobic001G225800 Sobic009G152000 Sobic009G152000 Sobic004G064200--Sobic009G152000 Sobic008G036100 Sobic008G036100 Sobic004G064200--Sobic008G036100 Sobic001G519600--Sobic009G230800 Sobic001G519600--Sobic010G202200 Sobic008G155500 Sobic008G155500 Sobic001G519600--Sobic008G155500 Sobic001G519600--Sobic001G340800 Sobic001G519600--Sobic009G061500 Sobic001G519600--Sobic006G269101 Sobic001G519600--Sobic006G143700 Sobic001G519600--Sobic008G148600 Sobic001G519600--Sobic010G024400
Octagon: transcription factors


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