Gene annotation
Transcriptome id Sobic.004G004800.1
Synonym ATBETAFRUCT4, Sb04g000620,INV3;INV3;INV3, VAC-INV
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Invertase genes (PubMedID : 24456189)
Up-reguralion under drought (PubMedID : 24916767)
Sugar degradation (PubMedID : 27330561)
glycosyl hydrolases, putative, expressed
UniProt I0B6X1 , T1RSD5 , D3U5C2 , T1RSA4 , D3U5B9 , D3U5C0
Pfam PF08244 PF11837 PF00251
Panther DB PTHR31953 PTHR31953:SF10
NCBI CDD -
KEGG Orthology K01193; INV, beta-fructofuranosidase
Gene Ontology GO:0004575; sucrose alpha-glucosidase activity GO:0004564beta-fructofuranosidase activity


Orthologs (automatic annotation)
TAIR AT1G62660 : Glycosyl hydrolases family 32 protein
RAP-DB (Rice) LOC_Os02g01590.1 : glycosyl hydrolases, putative, expressed
MaizeGDB (Corn) Zm00025a035083 , Zm00025a056601 , Zm00025a018649
Brachypodium KQK20061 , KQK20062 , KQJ92819
Barley HORVU6Hr1G004010.7 , HORVU6Hr1G004010.6 , HORVU6Hr1G004010.5 , HORVU6Hr1G004010.4 , HORVU6Hr1G004010.3 , HORVU6Hr1G004010.2 , HORVU6Hr1G004010.1 , HORVU6Hr1G004010.9 , HORVU6Hr1G004010.8 , HORVU7Hr1G001040.3 , HORVU7Hr1G001040.1 , HORVU7Hr1G001040.5 , HORVU2Hr1G091910.5 , HORVU2Hr1G091910.6 , HORVU2Hr1G091910.1 , HORVU6Hr1G004010.10 , HORVU7Hr1G000260.1 , HORVU7Hr1G000260.3 , HORVU7Hr1G000260.2 , HORVU7Hr1G000260.5 , HORVU7Hr1G000260.4 , HORVU7Hr1G000260.7 , HORVU7Hr1G000260.6 , HORVU6Hr1G004010.13 , HORVU6Hr1G004010.12 , HORVU6Hr1G004000.1 , HORVU6Hr1G004000.2 , HORVU6Hr1G004000.3 , HORVU6Hr1G004000.4 , HORVU6Hr1G004000.5 , HORVU7Hr1G001040.6 , HORVU7Hr1G001040.7 , HORVU7Hr1G001040.4 , HORVU7Hr1G001040.8
Wheat TraesCS7D02G010000 , TraesCS7D02G010000 , TraesCS2D02G382600 , TraesCS2D02G382600 , TraesCS7A02G010200 , TraesCS2B02G403000 , TraesCS6D02G026300 , TraesCS6D02G026300 , TraesCS4A02G484800 , TraesCS6A02G023300 , TraesCS6A02G023100 , TraesCS6A02G023300 , TraesCS6B02G031500 , TraesCS6D02G026500
Populus -


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cDNA sequences
Sobic.004G004800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G095600 metal transporter Nramp6, putative, expressed -
2 Sobic.001G257200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
3 Sobic.004G331000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsPOP6 - Putative Prolyl Oligopeptidase homologue, expressed -
4 Sobic.001G307500 - -
5 Sobic.006G089800 OsFBX103 - F-box domain containing protein, expressed -
6 Sobic.005G145201 - K06630: 14-3-3 protein epsilon
7 Sobic.002G304600 expressed protein -
8 Sobic.004G298200 Plant VAMP (vesicle-associated membrane protein) family protein(PubMedID : 26465154)@MSP domain containing protein, expressed -
9 Sobic.004G056800 DEFL1 - Defensin and Defensin-like DEFL family, expressed -
10 Sobic.003G198900 protein phosphatase 2C, putative, expressed -
11 Sobic.003G024400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
12 Sobic.005G076800 OsFBX412 - F-box domain containing protein, expressed -
13 Sobic.010G109800 - -
14 Sobic.002G192800 - -
15 Sobic.008G050200 - -
16 Sobic.005G135100 expressed protein -
17 Sobic.006G079800 OsFBX199 - F-box domain containing protein, expressed -
18 Sobic.001G156800 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
19 Sobic.006G150300 expressed protein -
20 Sobic.001G135700 - -


Gene co-expression network
sample Sobic004G004800 Sobic004G004800 Sobic002G095600 Sobic002G095600 Sobic004G004800--Sobic002G095600 Sobic001G257200 Sobic001G257200 Sobic004G004800--Sobic001G257200 Sobic004G331000 Sobic004G331000 Sobic004G004800--Sobic004G331000 Sobic001G307500 Sobic001G307500 Sobic004G004800--Sobic001G307500 Sobic006G089800 Sobic006G089800 Sobic004G004800--Sobic006G089800 Sobic005G145201 Sobic005G145201 Sobic004G004800--Sobic005G145201 Sobic002G304600 Sobic002G304600 Sobic004G004800--Sobic002G304600 Sobic004G298200 Sobic004G298200 Sobic004G004800--Sobic004G298200 Sobic004G056800 Sobic004G056800 Sobic004G004800--Sobic004G056800 Sobic002G095600--Sobic001G257200 Sobic010G109800 Sobic010G109800 Sobic002G095600--Sobic010G109800 Sobic002G095600--Sobic001G307500 Sobic002G095600--Sobic002G304600 Sobic005G076800 Sobic005G076800 Sobic002G095600--Sobic005G076800 Sobic002G192800 Sobic002G192800 Sobic002G095600--Sobic002G192800 Sobic003G024400 Sobic003G024400 Sobic002G095600--Sobic003G024400 Sobic002G095600--Sobic006G089800 Sobic002G095600--Sobic004G056800 Sobic005G135100 Sobic005G135100 Sobic001G257200--Sobic005G135100 Sobic001G106800 Sobic001G106800 Sobic001G257200--Sobic001G106800 Sobic001G257200--Sobic002G192800 Sobic006G204400 Sobic006G204400 Sobic001G257200--Sobic006G204400 Sobic008G136601 Sobic008G136601 Sobic001G257200--Sobic008G136601 Sobic001G257200--Sobic003G024400 Sobic002G074800 Sobic002G074800 Sobic001G257200--Sobic002G074800 Sobic006G001100 Sobic006G001100 Sobic001G257200--Sobic006G001100 Sobic001G257200--Sobic001G307500 Sobic006G116900 Sobic006G116900 Sobic004G331000--Sobic006G116900 Sobic004G263500 Sobic004G263500 Sobic004G331000--Sobic004G263500 Sobic005G048500 Sobic005G048500 Sobic004G331000--Sobic005G048500 Sobic003G198900 Sobic003G198900 Sobic004G331000--Sobic003G198900 Sobic008G055500 Sobic008G055500 Sobic004G331000--Sobic008G055500 Sobic009G116900 Sobic009G116900 Sobic004G331000--Sobic009G116900 Sobic001G257800 Sobic001G257800 Sobic004G331000--Sobic001G257800 Sobic004G331000--Sobic004G004800 Sobic009G217400 Sobic009G217400 Sobic004G331000--Sobic009G217400 Sobic001G307500--Sobic002G192800 Sobic001G307500--Sobic001G106800 Sobic001G307500--Sobic005G076800 Sobic009G229400 Sobic009G229400 Sobic001G307500--Sobic009G229400 Sobic001G194800 Sobic001G194800 Sobic001G307500--Sobic001G194800 Sobic001G156800 Sobic001G156800 Sobic001G307500--Sobic001G156800 Sobic001G253750 Sobic001G253750 Sobic001G307500--Sobic001G253750 Sobic008G030501 Sobic008G030501 Sobic001G307500--Sobic008G030501 Sobic007G081800 Sobic007G081800 Sobic001G307500--Sobic007G081800 Sobic006G089800--Sobic001G106800 Sobic002G429000 Sobic002G429000 Sobic006G089800--Sobic002G429000 Sobic002G021500 Sobic002G021500 Sobic006G089800--Sobic002G021500 Sobic006G018701 Sobic006G018701 Sobic006G089800--Sobic006G018701 Sobic003G343000 Sobic003G343000 Sobic006G089800--Sobic003G343000 Sobic003G343300 Sobic003G343300 Sobic006G089800--Sobic003G343300 Sobic010G026200 Sobic010G026200 Sobic006G089800--Sobic010G026200 Sobic005G039000 Sobic005G039000 Sobic006G089800--Sobic005G039000 Sobic002G406801 Sobic002G406801 Sobic006G089800--Sobic002G406801 Sobic003G040700 Sobic003G040700 Sobic005G145201--Sobic003G040700 Sobic004G107100 Sobic004G107100 Sobic005G145201--Sobic004G107100 Sobic003G089100 Sobic003G089100 Sobic005G145201--Sobic003G089100 Sobic006G120900 Sobic006G120900 Sobic005G145201--Sobic006G120900 Sobic003G234500 Sobic003G234500 Sobic005G145201--Sobic003G234500 Sobic003G235100 Sobic003G235100 Sobic005G145201--Sobic003G235100 Sobic010G105000 Sobic010G105000 Sobic005G145201--Sobic010G105000 Sobic001G408400 Sobic001G408400 Sobic005G145201--Sobic001G408400 Sobic010G173300 Sobic010G173300 Sobic005G145201--Sobic010G173300 Sobic002G304600--Sobic002G095600 Sobic002G304600--Sobic001G257200 Sobic002G304600--Sobic010G109800 Sobic010G104600 Sobic010G104600 Sobic002G304600--Sobic010G104600 Sobic006G079800 Sobic006G079800 Sobic002G304600--Sobic006G079800 Sobic002G304600--Sobic006G089800 Sobic002G304600--Sobic002G192800 Sobic002G304600--Sobic003G024400 Sobic002G304600--Sobic001G307500 Sobic004G298200--Sobic001G194800 Sobic001G112600 Sobic001G112600 Sobic004G298200--Sobic001G112600 Sobic006G115700 Sobic006G115700 Sobic004G298200--Sobic006G115700 Sobic002G364700 Sobic002G364700 Sobic004G298200--Sobic002G364700 Sobic003G244400 Sobic003G244400 Sobic004G298200--Sobic003G244400 Sobic008G055200 Sobic008G055200 Sobic004G298200--Sobic008G055200 Sobic005G050400 Sobic005G050400 Sobic004G298200--Sobic005G050400 Sobic004G298200--Sobic002G192800 Sobic010G253600 Sobic010G253600 Sobic004G298200--Sobic010G253600 Sobic008G018700 Sobic008G018700 Sobic004G056800--Sobic008G018700 Sobic004G056800--Sobic002G095600 Sobic004G056800--Sobic010G109800 Sobic004G056800--Sobic006G079800 Sobic010G034600 Sobic010G034600 Sobic004G056800--Sobic010G034600 Sobic007G226500 Sobic007G226500 Sobic004G056800--Sobic007G226500 Sobic004G056800--Sobic005G076800 Sobic004G056800--Sobic002G304600 Sobic003G421000 Sobic003G421000 Sobic004G056800--Sobic003G421000
Octagon: transcription factors


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