Gene annotation
Transcriptome id Sobic.004G331000.1,Sobic.004G331000.3,Sobic.004G331000.2
Synonym Sb04g035990
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
OsPOP6 - Putative Prolyl Oligopeptidase homologue, expressed
UniProt C5XUH2 , A0A194YSQ8 , A0A194YSQ7
Pfam PF12695
Panther DB PTHR12277 PTHR12277:SF53
NCBI CDD KOG1552; Predicted alpha/beta hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G31020 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g55330.1,LOC_Os02g55330.2 : OsPOP6 - Putative Prolyl Oligopeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a022477 , Zm00025a034699 , Zm00025a027966 , Zm00025a032928 , Zm00025a038863 , Zm00025a055109 , Zm00025a019386
Brachypodium KQJ93772 , KQK01153 , PNT66066 , KQJ93771
Barley HORVU6Hr1G085730.11 , HORVU6Hr1G085730.10 , HORVU6Hr1G085730.3 , HORVU6Hr1G085730.2 , HORVU6Hr1G085730.5 , HORVU6Hr1G085730.4 , HORVU6Hr1G085730.7 , HORVU6Hr1G085730.6 , HORVU6Hr1G085730.9 , HORVU6Hr1G085730.8
Wheat TraesCS6A02G360000 , TraesCS6A02G360000 , TraesCS6D02G343000 , TraesCS3D02G262400 , TraesCS3D02G262400 , TraesCS3A02G262400 , TraesCS3A02G262400 , TraesCS6B02G392900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G116900 AMP-binding enzyme family protein, expressed -
2 Sobic.004G263500 DnaK family protein, putative, expressed K09486: hypoxia up-regulated 1
3 Sobic.005G048500 serine esterase family protein, putative, expressed -
4 Sobic.003G198900 protein phosphatase 2C, putative, expressed -
5 Sobic.008G055500 Protein-tyrosine phosphatase domain containing protein, expressed -
6 Sobic.009G116900 CW-type Zinc Finger, putative, expressed -
7 Sobic.001G257800 myosin, putative, expressed K10357: myosin V
8 Sobic.004G004800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Invertase genes(PubMedID : 24456189)@Up-reguralion under drought(PubMedID : 24916767)@Sugar degradation(PubMedID : 27330561)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
9 Sobic.009G217400 regulator of chromosome condensation, putative, expressed -
10 Sobic.003G342500 methyltransferase, putative, expressed -
11 Sobic.010G006800 auxin-induced protein 5NG4, putative, expressed -
12 Sobic.001G414100 expressed protein -
13 Sobic.006G000900 formin-like protein 3 precursor, putative, expressed -
14 Sobic.007G004300 phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed -
15 Sobic.006G005200 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
16 Sobic.001G508800 similar to Beta-amylase(PubMedID : 29862293)@beta-amylase, putative, expressed K01177: beta-amylase
17 Sobic.003G402800 DUF647 domain containing protein, putative, expressed -
18 Sobic.006G156400 double-stranded RNA binding motif containing protein, expressed K18998: RNA polymerase II C-terminal domain phosphatase-like 1/2
19 Sobic.003G235100 HD domain containing protein 2, putative, expressed K07023: putative hydrolases of HD superfamily
20 Sobic.003G405600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@exostosin family domain containing protein, expressed -


Gene co-expression network
sample Sobic004G331000 Sobic004G331000 Sobic006G116900 Sobic006G116900 Sobic004G331000--Sobic006G116900 Sobic004G263500 Sobic004G263500 Sobic004G331000--Sobic004G263500 Sobic005G048500 Sobic005G048500 Sobic004G331000--Sobic005G048500 Sobic003G198900 Sobic003G198900 Sobic004G331000--Sobic003G198900 Sobic008G055500 Sobic008G055500 Sobic004G331000--Sobic008G055500 Sobic009G116900 Sobic009G116900 Sobic004G331000--Sobic009G116900 Sobic001G257800 Sobic001G257800 Sobic004G331000--Sobic001G257800 Sobic004G004800 Sobic004G004800 Sobic004G331000--Sobic004G004800 Sobic009G217400 Sobic009G217400 Sobic004G331000--Sobic009G217400 Sobic004G158600 Sobic004G158600 Sobic006G116900--Sobic004G158600 Sobic003G342500 Sobic003G342500 Sobic006G116900--Sobic003G342500 Sobic002G121450 Sobic002G121450 Sobic006G116900--Sobic002G121450 Sobic009G201000 Sobic009G201000 Sobic006G116900--Sobic009G201000 Sobic003G352900 Sobic003G352900 Sobic006G116900--Sobic003G352900 Sobic004G093100 Sobic004G093100 Sobic006G116900--Sobic004G093100 Sobic010G238300 Sobic010G238300 Sobic006G116900--Sobic010G238300 Sobic003G175350 Sobic003G175350 Sobic006G116900--Sobic003G175350 Sobic005G045800 Sobic005G045800 Sobic006G116900--Sobic005G045800 Sobic001G356100 Sobic001G356100 Sobic004G263500--Sobic001G356100 Sobic006G060000 Sobic006G060000 Sobic004G263500--Sobic006G060000 Sobic003G394500 Sobic003G394500 Sobic004G263500--Sobic003G394500 Sobic004G263500--Sobic008G055500 Sobic001G378800 Sobic001G378800 Sobic004G263500--Sobic001G378800 Sobic010G133400 Sobic010G133400 Sobic004G263500--Sobic010G133400 Sobic004G350700 Sobic004G350700 Sobic004G263500--Sobic004G350700 Sobic007G118500 Sobic007G118500 Sobic004G263500--Sobic007G118500 Sobic001G389200 Sobic001G389200 Sobic004G263500--Sobic001G389200 Sobic009G206100 Sobic009G206100 Sobic005G048500--Sobic009G206100 Sobic006G150300 Sobic006G150300 Sobic005G048500--Sobic006G150300 Sobic006G001100 Sobic006G001100 Sobic005G048500--Sobic006G001100 Sobic009G229400 Sobic009G229400 Sobic005G048500--Sobic009G229400 Sobic006G193400 Sobic006G193400 Sobic005G048500--Sobic006G193400 Sobic002G074800 Sobic002G074800 Sobic005G048500--Sobic002G074800 Sobic006G143900 Sobic006G143900 Sobic005G048500--Sobic006G143900 Sobic006G204400 Sobic006G204400 Sobic005G048500--Sobic006G204400 Sobic010G114200 Sobic010G114200 Sobic005G048500--Sobic010G114200 Sobic003G250400 Sobic003G250400 Sobic003G198900--Sobic003G250400 Sobic004G302800 Sobic004G302800 Sobic003G198900--Sobic004G302800 Sobic006G270000 Sobic006G270000 Sobic003G198900--Sobic006G270000 Sobic003G198900--Sobic001G257800 Sobic003G024400 Sobic003G024400 Sobic003G198900--Sobic003G024400 Sobic003G198900--Sobic002G074800 Sobic001G257200 Sobic001G257200 Sobic003G198900--Sobic001G257200 Sobic008G069300 Sobic008G069300 Sobic003G198900--Sobic008G069300 Sobic004G213300 Sobic004G213300 Sobic003G198900--Sobic004G213300 Sobic003G402800 Sobic003G402800 Sobic008G055500--Sobic003G402800 Sobic008G055500--Sobic006G060000 Sobic008G055500--Sobic004G350700 Sobic003G385300 Sobic003G385300 Sobic008G055500--Sobic003G385300 Sobic003G117800 Sobic003G117800 Sobic008G055500--Sobic003G117800 Sobic008G055500--Sobic001G257800 Sobic008G152700 Sobic008G152700 Sobic008G055500--Sobic008G152700 Sobic004G176200 Sobic004G176200 Sobic008G055500--Sobic004G176200 Sobic001G501900 Sobic001G501900 Sobic008G055500--Sobic001G501900 Sobic007G172700 Sobic007G172700 Sobic009G116900--Sobic007G172700 Sobic003G235100 Sobic003G235100 Sobic009G116900--Sobic003G235100 Sobic009G116900--Sobic001G257800 Sobic006G250800 Sobic006G250800 Sobic009G116900--Sobic006G250800 Sobic009G116900--Sobic004G350700 Sobic001G404900 Sobic001G404900 Sobic009G116900--Sobic001G404900 Sobic009G116900--Sobic008G055500 Sobic009G116900--Sobic008G152700 Sobic002G198100 Sobic002G198100 Sobic009G116900--Sobic002G198100 Sobic001G257800--Sobic003G402800 Sobic001G257800--Sobic003G385300 Sobic010G134650 Sobic010G134650 Sobic001G257800--Sobic010G134650 Sobic004G064200 Sobic004G064200 Sobic001G257800--Sobic004G064200 Sobic010G024400 Sobic010G024400 Sobic001G257800--Sobic010G024400 Sobic001G257800--Sobic004G176200 Sobic001G257800--Sobic002G074800 Sobic004G261700 Sobic004G261700 Sobic001G257800--Sobic004G261700 Sobic001G257800--Sobic008G152700 Sobic002G095600 Sobic002G095600 Sobic004G004800--Sobic002G095600 Sobic004G004800--Sobic001G257200 Sobic004G004800--Sobic004G331000 Sobic001G307500 Sobic001G307500 Sobic004G004800--Sobic001G307500 Sobic006G089800 Sobic006G089800 Sobic004G004800--Sobic006G089800 Sobic005G145201 Sobic005G145201 Sobic004G004800--Sobic005G145201 Sobic002G304600 Sobic002G304600 Sobic004G004800--Sobic002G304600 Sobic004G298200 Sobic004G298200 Sobic004G004800--Sobic004G298200 Sobic004G056800 Sobic004G056800 Sobic004G004800--Sobic004G056800 Sobic007G182000 Sobic007G182000 Sobic009G217400--Sobic007G182000 Sobic009G217400--Sobic006G250800 Sobic002G307800 Sobic002G307800 Sobic009G217400--Sobic002G307800 Sobic003G433400 Sobic003G433400 Sobic009G217400--Sobic003G433400 Sobic009G217400--Sobic009G116900 Sobic003G092800 Sobic003G092800 Sobic009G217400--Sobic003G092800 Sobic001G253300 Sobic001G253300 Sobic009G217400--Sobic001G253300 Sobic009G217400--Sobic001G257800 Sobic002G180800 Sobic002G180800 Sobic009G217400--Sobic002G180800
Octagon: transcription factors


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