Gene annotation
Transcriptome id Sobic.006G000900.1
Synonym Sb06g000250, ATFH5, Fh5
Functional annotation formin-like protein 3 precursor, putative, expressed
UniProt C5YB77
Pfam PF02181
Panther DB PTHR23213 PTHR23213:SF234
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G54650 : formin homology5
RAP-DB (Rice) LOC_Os07g36150.1 : formin-like protein 3 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a012174 , Zm00025a055533
Brachypodium KQJ81716
Barley HORVU2Hr1G006690.3 , HORVU2Hr1G006690.2 , HORVU2Hr1G006690.1 , HORVU2Hr1G006690.7 , HORVU2Hr1G006690.6 , HORVU2Hr1G006690.5 , HORVU2Hr1G006690.4 , HORVU2Hr1G006690.9 , HORVU2Hr1G006690.8 , HORVU0Hr1G015390.12 , HORVU0Hr1G015390.13 , HORVU0Hr1G015390.10 , HORVU0Hr1G015390.11 , HORVU0Hr1G015390.8 , HORVU0Hr1G015390.9 , HORVU0Hr1G015390.2 , HORVU0Hr1G015390.3 , HORVU0Hr1G015390.4 , HORVU0Hr1G015390.5 , HORVU0Hr1G015390.6 , HORVU0Hr1G015390.7
Wheat TraesCS2A02G044700 , TraesCS2B02G056800 , TraesCS6B02G163200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G428000 expressed protein -
2 Sobic.010G274800 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
3 Sobic.008G152700 expressed protein K07541: GPI mannosyltransferase 1 subunit X
4 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
5 Sobic.007G172700 ECT5, putative, expressed -
6 Sobic.004G194400 expressed protein -
7 Sobic.009G046900 N-acetylglucosaminyltransferase, putative, expressed -
8 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
9 Sobic.002G200000 zinc finger, C3HC4 type, putative, expressed -
10 Sobic.001G149000 FAR1 family protein, expressed -
11 Sobic.009G156800 expressed protein -
12 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
13 Sobic.006G191000 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
14 Sobic.008G069300 - -
15 Sobic.006G162400 expressed protein -
16 Sobic.001G308500 glycosyltransferase family protein 1, putative, expressed -
17 Sobic.007G030100 galactosyltransferase family protein, putative, expressed -
18 Sobic.008G055500 Protein-tyrosine phosphatase domain containing protein, expressed -
19 Sobic.002G233600 glycogen operon protein glgX, putative, expressed K01214: ISA, isoamylase
20 Sobic.006G071362 - K02021: putative ABC transport system ATP-binding protein


Gene co-expression network
sample Sobic006G000900 Sobic006G000900 Sobic003G428000 Sobic003G428000 Sobic006G000900--Sobic003G428000 Sobic010G274800 Sobic010G274800 Sobic006G000900--Sobic010G274800 Sobic008G152700 Sobic008G152700 Sobic006G000900--Sobic008G152700 Sobic003G394500 Sobic003G394500 Sobic006G000900--Sobic003G394500 Sobic007G172700 Sobic007G172700 Sobic006G000900--Sobic007G172700 Sobic004G194400 Sobic004G194400 Sobic006G000900--Sobic004G194400 Sobic009G046900 Sobic009G046900 Sobic006G000900--Sobic009G046900 Sobic003G190200 Sobic003G190200 Sobic006G000900--Sobic003G190200 Sobic002G200000 Sobic002G200000 Sobic006G000900--Sobic002G200000 Sobic001G149000 Sobic001G149000 Sobic003G428000--Sobic001G149000 Sobic003G428000--Sobic009G046900 Sobic003G428000--Sobic004G194400 Sobic003G428000--Sobic008G152700 Sobic003G428000--Sobic010G274800 Sobic009G252300 Sobic009G252300 Sobic003G428000--Sobic009G252300 Sobic003G385300 Sobic003G385300 Sobic003G428000--Sobic003G385300 Sobic004G082800 Sobic004G082800 Sobic003G428000--Sobic004G082800 Sobic002G074800 Sobic002G074800 Sobic003G428000--Sobic002G074800 Sobic001G308500 Sobic001G308500 Sobic010G274800--Sobic001G308500 Sobic010G274800--Sobic009G046900 Sobic010G274800--Sobic001G149000 Sobic010G274800--Sobic003G428000 Sobic010G274800--Sobic004G194400 Sobic006G265800 Sobic006G265800 Sobic010G274800--Sobic006G265800 Sobic006G071362 Sobic006G071362 Sobic010G274800--Sobic006G071362 Sobic010G086300 Sobic010G086300 Sobic010G274800--Sobic010G086300 Sobic006G134500 Sobic006G134500 Sobic010G274800--Sobic006G134500 Sobic008G152700--Sobic001G149000 Sobic008G152700--Sobic003G385300 Sobic003G117800 Sobic003G117800 Sobic008G152700--Sobic003G117800 Sobic004G077300 Sobic004G077300 Sobic008G152700--Sobic004G077300 Sobic008G152700--Sobic009G046900 Sobic008G152700--Sobic007G172700 Sobic008G152700--Sobic003G428000 Sobic008G152700--Sobic003G394500 Sobic001G385000 Sobic001G385000 Sobic008G152700--Sobic001G385000 Sobic003G394500--Sobic003G117800 Sobic003G394500--Sobic001G385000 Sobic004G350700 Sobic004G350700 Sobic003G394500--Sobic004G350700 Sobic001G378800 Sobic001G378800 Sobic003G394500--Sobic001G378800 Sobic007G118500 Sobic007G118500 Sobic003G394500--Sobic007G118500 Sobic003G394500--Sobic003G190200 Sobic006G232800 Sobic006G232800 Sobic003G394500--Sobic006G232800 Sobic007G030100 Sobic007G030100 Sobic003G394500--Sobic007G030100 Sobic001G424800 Sobic001G424800 Sobic003G394500--Sobic001G424800 Sobic006G060000 Sobic006G060000 Sobic007G172700--Sobic006G060000 Sobic007G172700--Sobic004G350700 Sobic007G172700--Sobic008G152700 Sobic007G172700--Sobic003G190200 Sobic007G172700--Sobic003G394500 Sobic003G058500 Sobic003G058500 Sobic007G172700--Sobic003G058500 Sobic002G355800 Sobic002G355800 Sobic007G172700--Sobic002G355800 Sobic007G172700--Sobic001G424800 Sobic007G172700--Sobic007G030100 Sobic004G194400--Sobic006G071362 Sobic004G194400--Sobic006G134500 Sobic004G194400--Sobic006G265800 Sobic004G194400--Sobic003G428000 Sobic010G277700 Sobic010G277700 Sobic004G194400--Sobic010G277700 Sobic004G194400--Sobic001G308500 Sobic004G194400--Sobic001G149000 Sobic004G194400--Sobic003G385300 Sobic004G194400--Sobic010G274800 Sobic009G046900--Sobic001G149000 Sobic009G178400 Sobic009G178400 Sobic009G046900--Sobic009G178400 Sobic002G233600 Sobic002G233600 Sobic009G046900--Sobic002G233600 Sobic009G046900--Sobic006G134500 Sobic009G046900--Sobic002G074800 Sobic009G046900--Sobic003G385300 Sobic001G384200 Sobic001G384200 Sobic009G046900--Sobic001G384200 Sobic006G193400 Sobic006G193400 Sobic009G046900--Sobic006G193400 Sobic003G358600 Sobic003G358600 Sobic009G046900--Sobic003G358600 Sobic003G190200--Sobic007G030100 Sobic003G190200--Sobic003G394500 Sobic003G190200--Sobic007G172700 Sobic003G021600 Sobic003G021600 Sobic003G190200--Sobic003G021600 Sobic003G190200--Sobic009G252300 Sobic003G190200--Sobic001G424800 Sobic003G393200 Sobic003G393200 Sobic003G190200--Sobic003G393200 Sobic003G190200--Sobic003G428000 Sobic003G190200--Sobic001G385000 Sobic002G200000--Sobic006G060000 Sobic007G076400 Sobic007G076400 Sobic002G200000--Sobic007G076400 Sobic008G116700 Sobic008G116700 Sobic002G200000--Sobic008G116700 Sobic001G141400 Sobic001G141400 Sobic002G200000--Sobic001G141400 Sobic006G115100 Sobic006G115100 Sobic002G200000--Sobic006G115100 Sobic008G055500 Sobic008G055500 Sobic002G200000--Sobic008G055500 Sobic002G200000--Sobic007G172700 Sobic007G087000 Sobic007G087000 Sobic002G200000--Sobic007G087000 Sobic002G200000--Sobic002G355800
Octagon: transcription factors


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