Gene annotation
Transcriptome id Sobic.009G085300.2
Synonym
Functional annotation -
UniProt A0A1Z5R1K6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.009G085300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G410300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
2 Sobic.001G453600 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
3 Sobic.009G044700 DTA2, putative, expressed -
4 Sobic.010G145100 - -
5 Sobic.007G049900 MYB family transcription factor, putative, expressed -
6 Sobic.006G162400 expressed protein -
7 Sobic.006G079800 OsFBX199 - F-box domain containing protein, expressed -
8 Sobic.005G076800 OsFBX412 - F-box domain containing protein, expressed -
9 Sobic.001G398200 MYB family transcription factor, putative, expressed -
10 Sobic.004G046800 expressed protein -
11 Sobic.004G138450 - -
12 Sobic.010G104600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Caleosin-related family protein(PubMedID : 26320239)@Up-reguralion under heat(PubMedID : 24916767)@caleosin related protein, putative, expressed K17991: peroxygenase
13 Sobic.002G243300 amino acid permease family protein, putative, expressed -
14 Sobic.005G093200 - -
15 Sobic.003G065201 - -
16 Sobic.003G008000 cyclin-T1-1, putative, expressed -
17 Sobic.003G421000 - -
18 Sobic.002G034750 - -
19 Sobic.009G229400 60S acidic ribosomal protein P0, putative, expressed K02941: RP-LP0, large subunit ribosomal protein LP0
20 Sobic.002G001200 - -


Gene co-expression network
sample Sobic009G085300 Sobic009G085300 Sobic003G410300 Sobic003G410300 Sobic009G085300--Sobic003G410300 Sobic001G453600 Sobic001G453600 Sobic009G085300--Sobic001G453600 Sobic009G044700 Sobic009G044700 Sobic009G085300--Sobic009G044700 Sobic010G145100 Sobic010G145100 Sobic009G085300--Sobic010G145100 Sobic007G049900 Sobic007G049900 Sobic009G085300--Sobic007G049900 Sobic006G162400 Sobic006G162400 Sobic009G085300--Sobic006G162400 Sobic006G079800 Sobic006G079800 Sobic009G085300--Sobic006G079800 Sobic005G076800 Sobic005G076800 Sobic009G085300--Sobic005G076800 Sobic001G398200 Sobic001G398200 Sobic009G085300--Sobic001G398200 Sobic007G092400 Sobic007G092400 Sobic003G410300--Sobic007G092400 Sobic003G410300--Sobic009G085300 Sobic003G410300--Sobic009G044700 Sobic002G034750 Sobic002G034750 Sobic003G410300--Sobic002G034750 Sobic003G008000 Sobic003G008000 Sobic003G410300--Sobic003G008000 Sobic010G104600 Sobic010G104600 Sobic003G410300--Sobic010G104600 Sobic003G410300--Sobic001G453600 Sobic002G243300 Sobic002G243300 Sobic003G410300--Sobic002G243300 Sobic004G135366 Sobic004G135366 Sobic003G410300--Sobic004G135366 Sobic001G453600--Sobic010G145100 Sobic004G046800 Sobic004G046800 Sobic001G453600--Sobic004G046800 Sobic006G093600 Sobic006G093600 Sobic001G453600--Sobic006G093600 Sobic009G229400 Sobic009G229400 Sobic001G453600--Sobic009G229400 Sobic009G202000 Sobic009G202000 Sobic001G453600--Sobic009G202000 Sobic001G453600--Sobic006G162400 Sobic001G387300 Sobic001G387300 Sobic001G453600--Sobic001G387300 Sobic003G024100 Sobic003G024100 Sobic001G453600--Sobic003G024100 Sobic009G061500 Sobic009G061500 Sobic001G453600--Sobic009G061500 Sobic009G044700--Sobic010G104600 Sobic009G044700--Sobic004G046800 Sobic001G106800 Sobic001G106800 Sobic009G044700--Sobic001G106800 Sobic009G044700--Sobic010G145100 Sobic005G093200 Sobic005G093200 Sobic009G044700--Sobic005G093200 Sobic002G111100 Sobic002G111100 Sobic009G044700--Sobic002G111100 Sobic008G136700 Sobic008G136700 Sobic009G044700--Sobic008G136700 Sobic002G192800 Sobic002G192800 Sobic009G044700--Sobic002G192800 Sobic003G100600 Sobic003G100600 Sobic009G044700--Sobic003G100600 Sobic010G145100--Sobic001G398200 Sobic010G124900 Sobic010G124900 Sobic010G145100--Sobic010G124900 Sobic010G145100--Sobic009G229400 Sobic010G145100--Sobic001G106800 Sobic010G145100--Sobic004G046800 Sobic010G145100--Sobic006G093600 Sobic010G145100--Sobic002G111100 Sobic010G145100--Sobic003G100600 Sobic006G204400 Sobic006G204400 Sobic010G145100--Sobic006G204400 Sobic007G049900--Sobic001G453600 Sobic007G049900--Sobic006G162400 Sobic002G414800 Sobic002G414800 Sobic007G049900--Sobic002G414800 Sobic007G049900--Sobic001G387300 Sobic009G218000 Sobic009G218000 Sobic007G049900--Sobic009G218000 Sobic008G011800 Sobic008G011800 Sobic007G049900--Sobic008G011800 Sobic009G046900 Sobic009G046900 Sobic007G049900--Sobic009G046900 Sobic002G239400 Sobic002G239400 Sobic007G049900--Sobic002G239400 Sobic010G225201 Sobic010G225201 Sobic007G049900--Sobic010G225201 Sobic006G162400--Sobic001G453600 Sobic006G162400--Sobic004G046800 Sobic006G134500 Sobic006G134500 Sobic006G162400--Sobic006G134500 Sobic001G356200 Sobic001G356200 Sobic006G162400--Sobic001G356200 Sobic006G162400--Sobic009G046900 Sobic010G255900 Sobic010G255900 Sobic006G162400--Sobic010G255900 Sobic004G113600 Sobic004G113600 Sobic006G162400--Sobic004G113600 Sobic006G162400--Sobic001G387300 Sobic010G130601 Sobic010G130601 Sobic006G162400--Sobic010G130601 Sobic010G109800 Sobic010G109800 Sobic006G079800--Sobic010G109800 Sobic001G257200 Sobic001G257200 Sobic006G079800--Sobic001G257200 Sobic001G307500 Sobic001G307500 Sobic006G079800--Sobic001G307500 Sobic006G079800--Sobic005G076800 Sobic006G079800--Sobic001G398200 Sobic006G079800--Sobic001G106800 Sobic003G024400 Sobic003G024400 Sobic006G079800--Sobic003G024400 Sobic006G079800--Sobic009G044700 Sobic002G180800 Sobic002G180800 Sobic006G079800--Sobic002G180800 Sobic005G076800--Sobic001G106800 Sobic005G076800--Sobic002G111100 Sobic005G076800--Sobic009G229400 Sobic005G076800--Sobic010G124900 Sobic005G076800--Sobic001G307500 Sobic005G076800--Sobic006G204400 Sobic010G003200 Sobic010G003200 Sobic005G076800--Sobic010G003200 Sobic005G076800--Sobic004G046800 Sobic005G076800--Sobic002G192800 Sobic001G398200--Sobic010G145100 Sobic001G398200--Sobic003G100600 Sobic001G254000 Sobic001G254000 Sobic001G398200--Sobic001G254000 Sobic001G398200--Sobic001G106800 Sobic001G398200--Sobic010G124900 Sobic002G073600 Sobic002G073600 Sobic001G398200--Sobic002G073600 Sobic001G398200--Sobic006G093600 Sobic002G030300 Sobic002G030300 Sobic001G398200--Sobic002G030300 Sobic001G467400 Sobic001G467400 Sobic001G398200--Sobic001G467400
Octagon: transcription factors


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