Gene annotation
Transcriptome id Sobic.001G178100.1
Synonym Sb01g015510, VTC4
Functional annotation inositol-1-monophosphatase, putative, expressed
UniProt A0A1B6QJI5
Pfam PF00459
Panther DB PTHR20854 PTHR20854:SF4
NCBI CDD KOG2951; Inositol monophosphatase
KEGG Orthology K10047; inositol-phosphate phosphatase / L-galactose 1-phosphate phosphatase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G02870 : Inositol monophosphatase family protein
RAP-DB (Rice) LOC_Os03g39000.2 : inositol-1-monophosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a007135
Brachypodium KQK14310 , KQK14311
Barley HORVU4Hr1G034300.8 , HORVU4Hr1G034300.9 , HORVU4Hr1G034300.6 , HORVU4Hr1G034300.7 , HORVU4Hr1G034300.4 , HORVU4Hr1G034300.5 , HORVU4Hr1G034300.2 , HORVU4Hr1G034300.3 , HORVU4Hr1G034300.1
Wheat TraesCS4B02G161300 , TraesCS4D02G151200 , TraesCS4A02G163700
Populus -


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cDNA sequences
Sobic.001G178100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G407000 4-alpha-glucanotransferase, putative, expressed K00705: 4-alpha-glucanotransferase
2 Sobic.009G127500 Alpha amylase, catalytic domain containing protein, expressed -
3 Sobic.001G067700 amine oxidase-related, putative, expressed -
4 Sobic.003G010800 C4-dicarboxylate transporter/malic acid transport protein, expressed -
5 Sobic.001G201900 folylpolyglutamate synthetase, putative, expressed K01930: folylpolyglutamate synthase
6 Sobic.003G291800 hexokinase, putative, expressed K00844: hexokinase
7 Sobic.001G116500 phosphoglucomutase, putative, expressed K01835: phosphoglucomutase
8 Sobic.010G134000 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
9 Sobic.007G069101 - -
10 Sobic.003G403300 Sucrose phosphate synthase genes(PubMedID : 24456189)@"sucrose-phosphate synthase, predicted target of miR6223 or sbi-miR6223-3p expressed in the stems of sweet sorghum"(PubMedID : 26117170)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
11 Sobic.004G064300 HD domain containing protein 2, putative, expressed K07023: putative hydrolases of HD superfamily
12 Sobic.009G155600 60S acidic ribosomal protein, putative, expressed K02943: RP-LP2, large subunit ribosomal protein LP2
13 Sobic.003G433400 OsDegp14 - Putative Deg protease homologue, expressed -
14 Sobic.003G213400 expressed protein -
15 Sobic.009G026300 expressed protein K17815: exonuclease V
16 Sobic.003G044300 D-tyrosyl-tRNA, putative, expressed K07560: dtd, D-aminoacyl-tRNA deacylase
17 Sobic.003G092800 white-brown complex homolog protein 7, putative, expressed -
18 Sobic.002G098900 phospholipase D, putative, expressed K01115: phospholipase D1/2
19 Sobic.003G235100 HD domain containing protein 2, putative, expressed K07023: putative hydrolases of HD superfamily
20 Sobic.002G084800 expressed protein -


Gene co-expression network
sample Sobic001G178100 Sobic001G178100 Sobic002G407000 Sobic002G407000 Sobic001G178100--Sobic002G407000 Sobic009G127500 Sobic009G127500 Sobic001G178100--Sobic009G127500 Sobic001G067700 Sobic001G067700 Sobic001G178100--Sobic001G067700 Sobic003G010800 Sobic003G010800 Sobic001G178100--Sobic003G010800 Sobic001G201900 Sobic001G201900 Sobic001G178100--Sobic001G201900 Sobic003G291800 Sobic003G291800 Sobic001G178100--Sobic003G291800 Sobic001G116500 Sobic001G116500 Sobic001G178100--Sobic001G116500 Sobic010G134000 Sobic010G134000 Sobic001G178100--Sobic010G134000 Sobic007G069101 Sobic007G069101 Sobic001G178100--Sobic007G069101 Sobic002G407000--Sobic001G201900 Sobic007G113600 Sobic007G113600 Sobic002G407000--Sobic007G113600 Sobic002G407000--Sobic001G178100 Sobic001G411200 Sobic001G411200 Sobic002G407000--Sobic001G411200 Sobic003G403300 Sobic003G403300 Sobic002G407000--Sobic003G403300 Sobic002G098900 Sobic002G098900 Sobic002G407000--Sobic002G098900 Sobic002G407000--Sobic010G134000 Sobic002G407000--Sobic001G067700 Sobic002G407000--Sobic003G010800 Sobic009G127500--Sobic001G178100 Sobic009G127500--Sobic002G407000 Sobic010G047700 Sobic010G047700 Sobic009G127500--Sobic010G047700 Sobic009G127500--Sobic001G116500 Sobic004G064300 Sobic004G064300 Sobic009G127500--Sobic004G064300 Sobic009G127500--Sobic001G067700 Sobic001G282800 Sobic001G282800 Sobic009G127500--Sobic001G282800 Sobic009G127500--Sobic010G134000 Sobic003G375700 Sobic003G375700 Sobic009G127500--Sobic003G375700 Sobic001G067700--Sobic003G403300 Sobic001G067700--Sobic002G407000 Sobic001G067700--Sobic002G098900 Sobic001G067700--Sobic001G178100 Sobic008G018700 Sobic008G018700 Sobic001G067700--Sobic008G018700 Sobic001G067700--Sobic003G010800 Sobic002G181600 Sobic002G181600 Sobic001G067700--Sobic002G181600 Sobic002G310900 Sobic002G310900 Sobic001G067700--Sobic002G310900 Sobic005G111700 Sobic005G111700 Sobic001G067700--Sobic005G111700 Sobic003G010800--Sobic010G134000 Sobic006G270000 Sobic006G270000 Sobic003G010800--Sobic006G270000 Sobic003G010800--Sobic002G310900 Sobic003G433400 Sobic003G433400 Sobic003G010800--Sobic003G433400 Sobic003G010800--Sobic003G403300 Sobic010G149800 Sobic010G149800 Sobic003G010800--Sobic010G149800 Sobic010G105000 Sobic010G105000 Sobic003G010800--Sobic010G105000 Sobic003G010800--Sobic003G291800 Sobic002G307800 Sobic002G307800 Sobic003G010800--Sobic002G307800 Sobic001G201900--Sobic002G407000 Sobic008G119250 Sobic008G119250 Sobic001G201900--Sobic008G119250 Sobic001G201900--Sobic007G113600 Sobic001G201900--Sobic001G178100 Sobic001G201900--Sobic005G111700 Sobic001G513800 Sobic001G513800 Sobic001G201900--Sobic001G513800 Sobic001G201900--Sobic004G064300 Sobic001G201900--Sobic001G116500 Sobic001G201900--Sobic003G403300 Sobic003G291800--Sobic003G433400 Sobic003G044300 Sobic003G044300 Sobic003G291800--Sobic003G044300 Sobic003G291800--Sobic003G010800 Sobic008G069300 Sobic008G069300 Sobic003G291800--Sobic008G069300 Sobic009G046900 Sobic009G046900 Sobic003G291800--Sobic009G046900 Sobic003G092800 Sobic003G092800 Sobic003G291800--Sobic003G092800 Sobic003G421000 Sobic003G421000 Sobic003G291800--Sobic003G421000 Sobic003G291800--Sobic006G270000 Sobic001G539400 Sobic001G539400 Sobic003G291800--Sobic001G539400 Sobic004G094700 Sobic004G094700 Sobic001G116500--Sobic004G094700 Sobic001G537100 Sobic001G537100 Sobic001G116500--Sobic001G537100 Sobic001G116500--Sobic005G111700 Sobic006G039400 Sobic006G039400 Sobic001G116500--Sobic006G039400 Sobic001G116500--Sobic001G178100 Sobic003G279200 Sobic003G279200 Sobic001G116500--Sobic003G279200 Sobic004G018000 Sobic004G018000 Sobic001G116500--Sobic004G018000 Sobic001G435400 Sobic001G435400 Sobic001G116500--Sobic001G435400 Sobic001G462200 Sobic001G462200 Sobic001G116500--Sobic001G462200 Sobic010G134000--Sobic003G010800 Sobic010G134000--Sobic003G433400 Sobic010G134000--Sobic003G403300 Sobic010G134000--Sobic002G310900 Sobic010G134000--Sobic002G407000 Sobic010G134000--Sobic001G411200 Sobic010G134000--Sobic003G291800 Sobic010G134000--Sobic001G178100 Sobic010G134000--Sobic006G270000 Sobic002G084800 Sobic002G084800 Sobic007G069101--Sobic002G084800 Sobic007G069101--Sobic001G178100 Sobic007G069101--Sobic003G044300 Sobic003G235100 Sobic003G235100 Sobic007G069101--Sobic003G235100 Sobic003G310300 Sobic003G310300 Sobic007G069101--Sobic003G310300 Sobic010G134600 Sobic010G134600 Sobic007G069101--Sobic010G134600 Sobic009G124600 Sobic009G124600 Sobic007G069101--Sobic009G124600 Sobic007G069101--Sobic003G092800 Sobic007G069101--Sobic003G010800
Octagon: transcription factors


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