Gene annotation
Transcriptome id Sobic.004G050300.1
Synonym Sb04g004300
Functional annotation FAD dependent oxidoreductase domain containing protein, expressed
UniProt C5XVF9
Pfam PF13450
Panther DB PTHR10668 PTHR10668:SF83
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G49555 : FAD/NAD(P)-binding oxidoreductase family protein
RAP-DB (Rice) LOC_Os12g43590.1 : FAD dependent oxidoreductase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a004246 , Zm00025a055868 , Zm00025a019038
Brachypodium KQJ85677 , KQJ85676 , KQJ85678 , KQJ85675 , PNT62280
Barley HORVU5Hr1G002180.8 , HORVU5Hr1G002180.9 , HORVU5Hr1G002180.4 , HORVU5Hr1G002180.5 , HORVU5Hr1G002180.6 , HORVU5Hr1G002180.7 , HORVU5Hr1G002180.1 , HORVU5Hr1G002180.2 , HORVU5Hr1G002180.3 , HORVU5Hr1G002180.12 , HORVU5Hr1G002180.13 , HORVU5Hr1G002180.10 , HORVU5Hr1G002180.11 , HORVU5Hr1G002140.1
Wheat TraesCS5A02G015100 , TraesCS5D02G021000 , TraesCS5D02G021000 , TraesCS5B02G013300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G167800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dihydroxy-acid dehydratase, putative, expressed K01687: dihydroxy-acid dehydratase
2 Sobic.001G429200 AT hook motif family protein, expressed -
3 Sobic.007G072100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBL44 - F-box domain and LRR containing protein, expressed -
4 Sobic.003G103701 - K04728: ATM, serine-protein kinase ATM
5 Sobic.003G113900 zinc finger matrin-type protein 5, putative, expressed K13152: U11/U12 small nuclear ribonucleoprotein 20 kDa protein
6 Sobic.006G200901 - -
7 Sobic.002G253900 growth regulator related protein, putative, expressed -
8 Sobic.009G068700 glutaminyl-tRNA synthetase, putative, expressed K01886: QARS, glutaminyl-tRNA synthetase
9 Sobic.005G030100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2-isopropylmalate synthase B, putative, expressed K01649: leuA, 2-isopropylmalate synthase
10 Sobic.003G415100 BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
11 Sobic.003G028400 OsFBX234 - F-box domain containing protein, expressed -
12 Sobic.003G161800 exportin 1, putative, expressed K14289: exportin-5
13 Sobic.007G036800 xylosyltransferase, putative, expressed -
14 Sobic.010G052400 SET domain containing protein, expressed K11430: [histone H3]-lysine27 N-trimethyltransferase EZH2
15 Sobic.009G122900 alpha 1,3-xylosyltransferase, putative, expressed K11714: rhamnogalacturonan II specific xylosyltransferase
16 Sobic.003G298900 1,3-beta-glucan synthase component, putative, expressed K11000: callose synthase
17 Sobic.004G145300 OsFBD12 - F-box and FBD domain containing protein, expressed -
18 Sobic.003G122300 mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
19 Sobic.001G115500 importin-alpha re-exporter, putative, expressed K18423: CSE1, CAS, exportin-2 (importin alpha re-exporter)
20 Sobic.009G148000 anthranilate phosphoribosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic004G050300 Sobic004G050300 Sobic007G167800 Sobic007G167800 Sobic004G050300--Sobic007G167800 Sobic001G429200 Sobic001G429200 Sobic004G050300--Sobic001G429200 Sobic007G072100 Sobic007G072100 Sobic004G050300--Sobic007G072100 Sobic003G103701 Sobic003G103701 Sobic004G050300--Sobic003G103701 Sobic003G113900 Sobic003G113900 Sobic004G050300--Sobic003G113900 Sobic006G200901 Sobic006G200901 Sobic004G050300--Sobic006G200901 Sobic002G253900 Sobic002G253900 Sobic004G050300--Sobic002G253900 Sobic009G068700 Sobic009G068700 Sobic004G050300--Sobic009G068700 Sobic005G030100 Sobic005G030100 Sobic004G050300--Sobic005G030100 Sobic007G167800--Sobic004G050300 Sobic003G028400 Sobic003G028400 Sobic007G167800--Sobic003G028400 Sobic001G507000 Sobic001G507000 Sobic007G167800--Sobic001G507000 Sobic007G167800--Sobic007G072100 Sobic007G167800--Sobic002G253900 Sobic003G119900 Sobic003G119900 Sobic007G167800--Sobic003G119900 Sobic006G127200 Sobic006G127200 Sobic007G167800--Sobic006G127200 Sobic002G126800 Sobic002G126800 Sobic007G167800--Sobic002G126800 Sobic005G068800 Sobic005G068800 Sobic007G167800--Sobic005G068800 Sobic002G390400 Sobic002G390400 Sobic001G429200--Sobic002G390400 Sobic003G180100 Sobic003G180100 Sobic001G429200--Sobic003G180100 Sobic001G346700 Sobic001G346700 Sobic001G429200--Sobic001G346700 Sobic001G429200--Sobic004G050300 Sobic010G052400 Sobic010G052400 Sobic001G429200--Sobic010G052400 Sobic009G069200 Sobic009G069200 Sobic001G429200--Sobic009G069200 Sobic001G115500 Sobic001G115500 Sobic001G429200--Sobic001G115500 Sobic001G507200 Sobic001G507200 Sobic001G429200--Sobic001G507200 Sobic003G415100 Sobic003G415100 Sobic001G429200--Sobic003G415100 Sobic003G411700 Sobic003G411700 Sobic007G072100--Sobic003G411700 Sobic003G343200 Sobic003G343200 Sobic007G072100--Sobic003G343200 Sobic007G072100--Sobic002G253900 Sobic003G298900 Sobic003G298900 Sobic007G072100--Sobic003G298900 Sobic004G306100 Sobic004G306100 Sobic007G072100--Sobic004G306100 Sobic001G033300 Sobic001G033300 Sobic007G072100--Sobic001G033300 Sobic002G271400 Sobic002G271400 Sobic007G072100--Sobic002G271400 Sobic004G014100 Sobic004G014100 Sobic007G072100--Sobic004G014100 Sobic001G425200 Sobic001G425200 Sobic007G072100--Sobic001G425200 Sobic003G103701--Sobic004G050300 Sobic002G056000 Sobic002G056000 Sobic003G103701--Sobic002G056000 Sobic003G103701--Sobic006G200901 Sobic003G103701--Sobic003G180100 Sobic003G161800 Sobic003G161800 Sobic003G103701--Sobic003G161800 Sobic009G148000 Sobic009G148000 Sobic003G103701--Sobic009G148000 Sobic001G067000 Sobic001G067000 Sobic003G103701--Sobic001G067000 Sobic003G103701--Sobic009G068700 Sobic003G103701--Sobic001G429200 Sobic002G399900 Sobic002G399900 Sobic003G113900--Sobic002G399900 Sobic007G036800 Sobic007G036800 Sobic003G113900--Sobic007G036800 Sobic003G113900--Sobic003G028400 Sobic010G059700 Sobic010G059700 Sobic003G113900--Sobic010G059700 Sobic007G030600 Sobic007G030600 Sobic003G113900--Sobic007G030600 Sobic003G113900--Sobic007G072100 Sobic004G129500 Sobic004G129500 Sobic003G113900--Sobic004G129500 Sobic003G113900--Sobic007G167800 Sobic006G127500 Sobic006G127500 Sobic003G113900--Sobic006G127500 Sobic002G343000 Sobic002G343000 Sobic006G200901--Sobic002G343000 Sobic006G143300 Sobic006G143300 Sobic006G200901--Sobic006G143300 Sobic006G200901--Sobic004G014100 Sobic006G200901--Sobic009G148000 Sobic006G200901--Sobic002G253900 Sobic003G217500 Sobic003G217500 Sobic006G200901--Sobic003G217500 Sobic006G186300 Sobic006G186300 Sobic006G200901--Sobic006G186300 Sobic002G230400 Sobic002G230400 Sobic006G200901--Sobic002G230400 Sobic004G075700 Sobic004G075700 Sobic006G200901--Sobic004G075700 Sobic002G253900--Sobic009G148000 Sobic001G123100 Sobic001G123100 Sobic002G253900--Sobic001G123100 Sobic002G253900--Sobic006G200901 Sobic002G253900--Sobic002G343000 Sobic001G005800 Sobic001G005800 Sobic002G253900--Sobic001G005800 Sobic001G540700 Sobic001G540700 Sobic002G253900--Sobic001G540700 Sobic006G218900 Sobic006G218900 Sobic002G253900--Sobic006G218900 Sobic002G284100 Sobic002G284100 Sobic002G253900--Sobic002G284100 Sobic002G006100 Sobic002G006100 Sobic002G253900--Sobic002G006100 Sobic009G052100 Sobic009G052100 Sobic009G068700--Sobic009G052100 Sobic009G068700--Sobic005G068800 Sobic009G068700--Sobic007G167800 Sobic009G068700--Sobic007G072100 Sobic009G068700--Sobic006G127200 Sobic009G068700--Sobic004G129500 Sobic010G252700 Sobic010G252700 Sobic009G068700--Sobic010G252700 Sobic002G123600 Sobic002G123600 Sobic009G068700--Sobic002G123600 Sobic003G432300 Sobic003G432300 Sobic009G068700--Sobic003G432300 Sobic009G030400 Sobic009G030400 Sobic005G030100--Sobic009G030400 Sobic005G030100--Sobic002G390400 Sobic010G207400 Sobic010G207400 Sobic005G030100--Sobic010G207400 Sobic007G150700 Sobic007G150700 Sobic005G030100--Sobic007G150700 Sobic005G030100--Sobic003G161800 Sobic008G052200 Sobic008G052200 Sobic005G030100--Sobic008G052200 Sobic006G061100 Sobic006G061100 Sobic005G030100--Sobic006G061100 Sobic001G423300 Sobic001G423300 Sobic005G030100--Sobic001G423300 Sobic008G160500 Sobic008G160500 Sobic005G030100--Sobic008G160500
Octagon: transcription factors


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