Gene annotation
Transcriptome id Sobic.009G068700.1
Synonym OVA9, Sb09g005690
Functional annotation glutaminyl-tRNA synthetase, putative, expressed
UniProt C5YU83
Pfam PF04557 PF03950 PF04558 PF00749
Panther DB PTHR11451 PTHR11451:SF24
NCBI CDD -
KEGG Orthology K01886; QARS, glutaminyl-tRNA synthetase
Gene Ontology GO:0006425; glutaminyl-tRNA aminoacylation GO:0005737cytoplasm GO:0005524ATP binding GO:0004819glutamine-tRNA ligase activity GO:0000166nucleotide binding GO:0006418tRNA aminoacylation for protein translation GO:0004812aminoacyl-tRNA ligase activity GO:0016876aminoacyl-tRNA ligase activity


Orthologs (automatic annotation)
TAIR AT1G25350 : glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative
RAP-DB (Rice) LOC_Os05g08990.1 : glutaminyl-tRNA synthetase, putative, expressed
MaizeGDB (Corn) Zm00025a023125 , Zm00025a035825
Brachypodium KQK03084
Barley HORVU3Hr1G020250.6 , HORVU3Hr1G020250.7 , HORVU3Hr1G020250.4 , HORVU3Hr1G020250.5 , HORVU3Hr1G020250.2 , HORVU3Hr1G020250.1 , HORVU3Hr1G020250.8 , HORVU3Hr1G020250.9 , HORVU3Hr1G020250.10 , HORVU3Hr1G020250.11 , HORVU3Hr1G020250.12 , HORVU3Hr1G020250.3
Wheat TraesCS7A02G489700 , TraesCS7D02G476100 , TraesCS3B02G132300 , TraesCS3B02G132300 , TraesCS7B02G392800 , TraesCS3D02G113800
Populus -


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cDNA sequences
Sobic.009G068700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G052100 tubulin/FtsZ domain containing protein, putative, expressed K10389: tubulin gamma
2 Sobic.005G068800 TOPBP1A - Similar to DNA replication protein TOPBP1 from, expressed K10728: topoisomerase (DNA) II binding protein 1
3 Sobic.007G167800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dihydroxy-acid dehydratase, putative, expressed K01687: dihydroxy-acid dehydratase
4 Sobic.007G072100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBL44 - F-box domain and LRR containing protein, expressed -
5 Sobic.006G127200 kelch repeat protein, putative, expressed -
6 Sobic.004G129500 expressed protein -
7 Sobic.010G252700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cullin family domain containing protein, putative, expressed K03349: anaphase-promoting complex subunit 2
8 Sobic.002G123600 expressed protein -
9 Sobic.003G432300 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein K14794: ribosomal RNA-processing protein 12
10 Sobic.006G071628 - -
11 Sobic.008G031200 pentatricopeptide, putative, expressed -
12 Sobic.002G351700 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
13 Sobic.004G306100 expressed protein -
14 Sobic.002G271400 RNA recognition motif containing protein, putative, expressed -
15 Sobic.001G242300 expressed protein -
16 Sobic.001G507200 PIR, putative, expressed K05749: cytoplasmic FMR1 interacting protein
17 Sobic.003G103701 - K04728: ATM, serine-protein kinase ATM
18 Sobic.007G123100 PPR repeat domain containing protein, putative, expressed -
19 Sobic.004G095200 Peptidase family C50, putative, expressed K02365: separase
20 Sobic.004G050300 FAD dependent oxidoreductase domain containing protein, expressed -


Gene co-expression network
sample Sobic009G068700 Sobic009G068700 Sobic009G052100 Sobic009G052100 Sobic009G068700--Sobic009G052100 Sobic005G068800 Sobic005G068800 Sobic009G068700--Sobic005G068800 Sobic007G167800 Sobic007G167800 Sobic009G068700--Sobic007G167800 Sobic007G072100 Sobic007G072100 Sobic009G068700--Sobic007G072100 Sobic006G127200 Sobic006G127200 Sobic009G068700--Sobic006G127200 Sobic004G129500 Sobic004G129500 Sobic009G068700--Sobic004G129500 Sobic010G252700 Sobic010G252700 Sobic009G068700--Sobic010G252700 Sobic002G123600 Sobic002G123600 Sobic009G068700--Sobic002G123600 Sobic003G432300 Sobic003G432300 Sobic009G068700--Sobic003G432300 Sobic004G315700 Sobic004G315700 Sobic009G052100--Sobic004G315700 Sobic004G156200 Sobic004G156200 Sobic009G052100--Sobic004G156200 Sobic001G507200 Sobic001G507200 Sobic009G052100--Sobic001G507200 Sobic009G049200 Sobic009G049200 Sobic009G052100--Sobic009G049200 Sobic006G071628 Sobic006G071628 Sobic009G052100--Sobic006G071628 Sobic010G250800 Sobic010G250800 Sobic009G052100--Sobic010G250800 Sobic003G315700 Sobic003G315700 Sobic009G052100--Sobic003G315700 Sobic009G052100--Sobic010G252700 Sobic003G420300 Sobic003G420300 Sobic009G052100--Sobic003G420300 Sobic001G507000 Sobic001G507000 Sobic005G068800--Sobic001G507000 Sobic005G068800--Sobic004G156200 Sobic004G095200 Sobic004G095200 Sobic005G068800--Sobic004G095200 Sobic006G120600 Sobic006G120600 Sobic005G068800--Sobic006G120600 Sobic009G146250 Sobic009G146250 Sobic005G068800--Sobic009G146250 Sobic006G195500 Sobic006G195500 Sobic005G068800--Sobic006G195500 Sobic003G183700 Sobic003G183700 Sobic005G068800--Sobic003G183700 Sobic002G021200 Sobic002G021200 Sobic005G068800--Sobic002G021200 Sobic005G068800--Sobic009G052100 Sobic004G050300 Sobic004G050300 Sobic007G167800--Sobic004G050300 Sobic003G028400 Sobic003G028400 Sobic007G167800--Sobic003G028400 Sobic007G167800--Sobic001G507000 Sobic007G167800--Sobic007G072100 Sobic002G253900 Sobic002G253900 Sobic007G167800--Sobic002G253900 Sobic003G119900 Sobic003G119900 Sobic007G167800--Sobic003G119900 Sobic007G167800--Sobic006G127200 Sobic002G126800 Sobic002G126800 Sobic007G167800--Sobic002G126800 Sobic007G167800--Sobic005G068800 Sobic003G411700 Sobic003G411700 Sobic007G072100--Sobic003G411700 Sobic003G343200 Sobic003G343200 Sobic007G072100--Sobic003G343200 Sobic007G072100--Sobic002G253900 Sobic003G298900 Sobic003G298900 Sobic007G072100--Sobic003G298900 Sobic004G306100 Sobic004G306100 Sobic007G072100--Sobic004G306100 Sobic001G033300 Sobic001G033300 Sobic007G072100--Sobic001G033300 Sobic002G271400 Sobic002G271400 Sobic007G072100--Sobic002G271400 Sobic004G014100 Sobic004G014100 Sobic007G072100--Sobic004G014100 Sobic001G425200 Sobic001G425200 Sobic007G072100--Sobic001G425200 Sobic006G127200--Sobic004G306100 Sobic006G127200--Sobic002G271400 Sobic010G257500 Sobic010G257500 Sobic006G127200--Sobic010G257500 Sobic006G127200--Sobic002G123600 Sobic003G409600 Sobic003G409600 Sobic006G127200--Sobic003G409600 Sobic003G226700 Sobic003G226700 Sobic006G127200--Sobic003G226700 Sobic009G081800 Sobic009G081800 Sobic006G127200--Sobic009G081800 Sobic010G103500 Sobic010G103500 Sobic006G127200--Sobic010G103500 Sobic001G025900 Sobic001G025900 Sobic006G127200--Sobic001G025900 Sobic007G036800 Sobic007G036800 Sobic004G129500--Sobic007G036800 Sobic004G129500--Sobic010G103500 Sobic001G296800 Sobic001G296800 Sobic004G129500--Sobic001G296800 Sobic004G129500--Sobic003G028400 Sobic004G129500--Sobic003G411700 Sobic002G426100 Sobic002G426100 Sobic004G129500--Sobic002G426100 Sobic004G129500--Sobic002G123600 Sobic002G043000 Sobic002G043000 Sobic004G129500--Sobic002G043000 Sobic001G361200 Sobic001G361200 Sobic004G129500--Sobic001G361200 Sobic008G179000 Sobic008G179000 Sobic010G252700--Sobic008G179000 Sobic007G123100 Sobic007G123100 Sobic010G252700--Sobic007G123100 Sobic010G252700--Sobic009G052100 Sobic002G362200 Sobic002G362200 Sobic010G252700--Sobic002G362200 Sobic001G149100 Sobic001G149100 Sobic010G252700--Sobic001G149100 Sobic008G031200 Sobic008G031200 Sobic010G252700--Sobic008G031200 Sobic008G090000 Sobic008G090000 Sobic010G252700--Sobic008G090000 Sobic010G252700--Sobic006G071628 Sobic010G252700--Sobic010G250800 Sobic002G123600--Sobic006G127200 Sobic008G090400 Sobic008G090400 Sobic002G123600--Sobic008G090400 Sobic002G123600--Sobic004G306100 Sobic002G095300 Sobic002G095300 Sobic002G123600--Sobic002G095300 Sobic002G123600--Sobic002G271400 Sobic003G397100 Sobic003G397100 Sobic002G123600--Sobic003G397100 Sobic001G242300 Sobic001G242300 Sobic002G123600--Sobic001G242300 Sobic002G123600--Sobic003G411700 Sobic002G123600--Sobic004G129500 Sobic003G432300--Sobic002G126800 Sobic005G028100 Sobic005G028100 Sobic003G432300--Sobic005G028100 Sobic005G088900 Sobic005G088900 Sobic003G432300--Sobic005G088900 Sobic002G132600 Sobic002G132600 Sobic003G432300--Sobic002G132600 Sobic001G373000 Sobic001G373000 Sobic003G432300--Sobic001G373000 Sobic003G144000 Sobic003G144000 Sobic003G432300--Sobic003G144000 Sobic008G000600 Sobic008G000600 Sobic003G432300--Sobic008G000600 Sobic003G432300--Sobic002G043000 Sobic004G038100 Sobic004G038100 Sobic003G432300--Sobic004G038100
Octagon: transcription factors


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