Gene annotation
Transcriptome id Sobic.005G129600.1
Synonym SCPL45, Sb05g019090
Functional annotation OsSCP63 - Putative Serine Carboxypeptidase homologue, expressed
UniProt A0A1Z5RIY9
Pfam PF00450
Panther DB PTHR11802:SF109 PTHR11802
NCBI CDD KOG1282; Serine carboxypeptidases (lysosomal cathepsin A)
KEGG Orthology K16297; serine carboxypeptidase-like clade II
Gene Ontology GO:0004185; serine-type carboxypeptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT1G28110 : serine carboxypeptidase-like 45
RAP-DB (Rice) LOC_Os11g31980.1 : OsSCP63 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a029806 , Zm00025a015672 , Zm00025a011679
Brachypodium -
Barley -
Wheat TraesCS2D02G285600 , TraesCS2D02G285600 , TraesCS2A02G287100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G357000 inactive receptor kinase At2g26730 precursor, putative, expressed -
2 Sobic.004G113900 polygalacturonase, putative, expressed -
3 Sobic.003G432000 expressed protein -
4 Sobic.007G211200 inactive receptor kinase At2g26730 precursor, putative, expressed -
5 Sobic.001G267800 thaumatin-like protein 1 precursor, putative, expressed -
6 Sobic.002G035500 CIN-like (ClassII) Subclade 13 TCP(PubMedID : 21444336)@basic helix-loop-helix (bHLH) transcription factor(PubMedID : 23915383)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
7 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -
8 Sobic.009G257900 expressed protein -
9 Sobic.004G317200 "Upregulated to a greater extent than that of SbER1 in stem in response to drouht stress, not expredded in roots. SbER2 fusion protein localized on the cell membrane and chloroplast. Net photosynthetic rate and WUE, phenylpropanoid biosynthetic genes expression, and lignin content increased in overexpressing maize."(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
10 Sobic.003G113500 MFS18 protein precursor, putative, expressed -
11 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
12 Sobic.007G160300 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
13 Sobic.003G309400 OsSub4 - Putative Subtilisin homologue, expressed -
14 Sobic.002G032500 leucine-rich repeat family protein, putative, expressed -
15 Sobic.004G248100 endoglucanase, putative, expressed -
16 Sobic.003G083500 inactive receptor kinase At2g26730 precursor, putative, expressed -
17 Sobic.001G470200 membrane associated DUF588 domain containing protein, putative, expressed -
18 Sobic.001G247700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
19 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
20 Sobic.001G119200 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic005G129600 Sobic005G129600 Sobic004G357000 Sobic004G357000 Sobic005G129600--Sobic004G357000 Sobic004G113900 Sobic004G113900 Sobic005G129600--Sobic004G113900 Sobic003G432000 Sobic003G432000 Sobic005G129600--Sobic003G432000 Sobic007G211200 Sobic007G211200 Sobic005G129600--Sobic007G211200 Sobic001G267800 Sobic001G267800 Sobic005G129600--Sobic001G267800 Sobic002G035500 Sobic002G035500 Sobic005G129600--Sobic002G035500 Sobic003G089300 Sobic003G089300 Sobic005G129600--Sobic003G089300 Sobic009G257900 Sobic009G257900 Sobic005G129600--Sobic009G257900 Sobic004G317200 Sobic004G317200 Sobic005G129600--Sobic004G317200 Sobic004G357000--Sobic007G211200 Sobic003G113500 Sobic003G113500 Sobic004G357000--Sobic003G113500 Sobic004G357000--Sobic004G317200 Sobic004G357000--Sobic003G089300 Sobic004G248100 Sobic004G248100 Sobic004G357000--Sobic004G248100 Sobic002G032500 Sobic002G032500 Sobic004G357000--Sobic002G032500 Sobic004G357000--Sobic005G129600 Sobic001G470200 Sobic001G470200 Sobic004G357000--Sobic001G470200 Sobic004G211700 Sobic004G211700 Sobic004G357000--Sobic004G211700 Sobic004G113900--Sobic005G129600 Sobic004G113900--Sobic003G432000 Sobic004G113900--Sobic002G035500 Sobic004G113900--Sobic009G257900 Sobic004G113900--Sobic001G267800 Sobic002G260600 Sobic002G260600 Sobic004G113900--Sobic002G260600 Sobic004G113900--Sobic007G211200 Sobic001G247700 Sobic001G247700 Sobic004G113900--Sobic001G247700 Sobic004G115700 Sobic004G115700 Sobic004G113900--Sobic004G115700 Sobic003G432000--Sobic004G113900 Sobic003G432000--Sobic005G129600 Sobic003G338200 Sobic003G338200 Sobic003G432000--Sobic003G338200 Sobic001G345200 Sobic001G345200 Sobic003G432000--Sobic001G345200 Sobic010G234900 Sobic010G234900 Sobic003G432000--Sobic010G234900 Sobic003G432000--Sobic007G211200 Sobic003G432000--Sobic004G357000 Sobic003G432000--Sobic001G247700 Sobic003G432000--Sobic001G267800 Sobic001G046400 Sobic001G046400 Sobic007G211200--Sobic001G046400 Sobic007G211200--Sobic004G357000 Sobic007G211200--Sobic003G089300 Sobic007G211200--Sobic002G032500 Sobic007G211200--Sobic004G211700 Sobic004G342000 Sobic004G342000 Sobic007G211200--Sobic004G342000 Sobic007G211200--Sobic003G113500 Sobic001G135600 Sobic001G135600 Sobic007G211200--Sobic001G135600 Sobic002G337600 Sobic002G337600 Sobic007G211200--Sobic002G337600 Sobic003G300200 Sobic003G300200 Sobic001G267800--Sobic003G300200 Sobic001G267800--Sobic005G129600 Sobic001G267800--Sobic003G113500 Sobic007G189400 Sobic007G189400 Sobic001G267800--Sobic007G189400 Sobic003G309400 Sobic003G309400 Sobic001G267800--Sobic003G309400 Sobic003G300400 Sobic003G300400 Sobic001G267800--Sobic003G300400 Sobic010G078700 Sobic010G078700 Sobic001G267800--Sobic010G078700 Sobic002G072700 Sobic002G072700 Sobic001G267800--Sobic002G072700 Sobic009G141300 Sobic009G141300 Sobic001G267800--Sobic009G141300 Sobic007G019600 Sobic007G019600 Sobic002G035500--Sobic007G019600 Sobic002G035500--Sobic005G129600 Sobic002G035500--Sobic004G113900 Sobic010G209800 Sobic010G209800 Sobic002G035500--Sobic010G209800 Sobic004G191600 Sobic004G191600 Sobic002G035500--Sobic004G191600 Sobic003G282600 Sobic003G282600 Sobic002G035500--Sobic003G282600 Sobic002G035500--Sobic009G257900 Sobic004G237300 Sobic004G237300 Sobic002G035500--Sobic004G237300 Sobic007G162000 Sobic007G162000 Sobic002G035500--Sobic007G162000 Sobic003G089300--Sobic007G211200 Sobic009G060800 Sobic009G060800 Sobic003G089300--Sobic009G060800 Sobic010G192500 Sobic010G192500 Sobic003G089300--Sobic010G192500 Sobic003G089300--Sobic002G032500 Sobic003G089300--Sobic004G357000 Sobic007G160300 Sobic007G160300 Sobic003G089300--Sobic007G160300 Sobic001G286700 Sobic001G286700 Sobic003G089300--Sobic001G286700 Sobic003G089300--Sobic004G211700 Sobic001G155700 Sobic001G155700 Sobic003G089300--Sobic001G155700 Sobic009G257900--Sobic004G317200 Sobic004G108400 Sobic004G108400 Sobic009G257900--Sobic004G108400 Sobic009G025400 Sobic009G025400 Sobic009G257900--Sobic009G025400 Sobic009G257900--Sobic005G129600 Sobic004G313900 Sobic004G313900 Sobic009G257900--Sobic004G313900 Sobic004G329000 Sobic004G329000 Sobic009G257900--Sobic004G329000 Sobic001G390400 Sobic001G390400 Sobic009G257900--Sobic001G390400 Sobic009G257900--Sobic004G357000 Sobic009G257900--Sobic004G113900 Sobic010G020600 Sobic010G020600 Sobic004G317200--Sobic010G020600 Sobic004G317200--Sobic004G357000 Sobic004G317200--Sobic001G470200 Sobic004G317200--Sobic003G089300 Sobic004G317200--Sobic001G390400 Sobic006G241800 Sobic006G241800 Sobic004G317200--Sobic006G241800 Sobic004G317200--Sobic007G211200 Sobic004G317200--Sobic007G160300 Sobic006G058000 Sobic006G058000 Sobic004G317200--Sobic006G058000
Octagon: transcription factors


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