Gene annotation
Transcriptome id Sobic.008G162000.1
Synonym ATRDH1, ST1, MST1, STR1, ATMST1
Functional annotation rhodanese-like domain containing protein, putative, expressed
UniProt C5YRH3
Pfam PF00581
Panther DB PTHR11364 PTHR11364:SF12
NCBI CDD KOG1529; Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase
KEGG Orthology K01011; TST, MPST, thiosulfate/3-mercaptopyruvate sulfurtransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G79230 : mercaptopyruvate sulfurtransferase 1
RAP-DB (Rice) LOC_Os12g41500.1 : rhodanese-like domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a012871 , Zm00025a004651
Brachypodium KQJ85888 , KQJ85887 , KQJ85889 , PNT62357
Barley HORVU5Hr1G012200.10 , HORVU5Hr1G012200.12 , HORVU5Hr1G012200.8 , HORVU5Hr1G012200.9 , HORVU5Hr1G012200.11 , HORVU5Hr1G012200.2 , HORVU5Hr1G012200.3 , HORVU5Hr1G012200.1 , HORVU5Hr1G012200.6 , HORVU5Hr1G012200.7 , HORVU5Hr1G012200.4 , HORVU5Hr1G012200.5 , HORVU5Hr1G012200.13
Wheat TraesCS5D02G063700 , TraesCS5D02G063700 , TraesCS5B02G064500 , TraesCS5A02G052200 , TraesCS5A02G052200
Populus -


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cDNA sequences
Sobic.008G162000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G044000 WD domain, G-beta repeat domain containing protein, expressed K03246: translation initiation factor 3 subunit I
2 Sobic.007G152400 eukaryotic translation initiation factor 6, putative, expressed K03264: translation initiation factor 6
3 Sobic.009G070200 Der1-like family domain containing protein, expressed K13989: Derlin-2/3
4 Sobic.006G095200 signal peptidase complex subunit 2, putative, expressed K12947: SPCS2, signal peptidase complex subunit 2
5 Sobic.004G282100 peptidase, putative, expressed K06013: STE24 endopeptidase
6 Sobic.009G201800 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53
7 Sobic.001G458200 protein transport protein Sec61 subunit alpha, putative, expressed K10956: protein transport protein SEC61 subunit alpha
8 Sobic.002G093900 mRNA-decapping enzyme, putative, expressed K12611: mRNA-decapping enzyme 1B
9 Sobic.004G204800 26S proteasome non-ATPase regulatory subunit 6, putative, expressed K03037: PSMD6, 26S proteasome regulatory subunit N7
10 Sobic.003G043400 syntaxin, putative, expressed K08490: syntaxin 5
11 Sobic.003G148900 translation machinery-associated protein 20, putative, expressed K07575: PUA domain protein
12 Sobic.009G002000 ankyrin repeat family protein, putative, expressed -
13 Sobic.003G039200 ubiquitin-conjugating enzyme, putative, expressed K10573: UBE2A, UBC2, ubiquitin-conjugating enzyme E2 A
14 Sobic.010G220900 thioredoxin, putative, expressed K03671: thioredoxin 1
15 Sobic.003G121600 gb protein, putative, expressed -
16 Sobic.003G132000 proteasome subunit, putative, expressed K12176: COPS2, CSN2, COP9 signalosome complex subunit 2
17 Sobic.009G120100 OsSigP5 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed K13280: SEC11, signal peptidase I
18 Sobic.001G532100 proteasome subunit, putative, expressed K12175: GPS1, COPS1, COP9 signalosome complex subunit 1
19 Sobic.004G010700 expressed protein -
20 Sobic.003G128300 NEDD8-activating enzyme E1 catalytic subunit, putative, expressed K10686: UBE1C, ubiquitin-activating enzyme E1 C


Gene co-expression network
sample Sobic008G162000 Sobic008G162000 Sobic002G044000 Sobic002G044000 Sobic008G162000--Sobic002G044000 Sobic007G152400 Sobic007G152400 Sobic008G162000--Sobic007G152400 Sobic009G070200 Sobic009G070200 Sobic008G162000--Sobic009G070200 Sobic006G095200 Sobic006G095200 Sobic008G162000--Sobic006G095200 Sobic004G282100 Sobic004G282100 Sobic008G162000--Sobic004G282100 Sobic009G201800 Sobic009G201800 Sobic008G162000--Sobic009G201800 Sobic001G458200 Sobic001G458200 Sobic008G162000--Sobic001G458200 Sobic002G093900 Sobic002G093900 Sobic008G162000--Sobic002G093900 Sobic004G204800 Sobic004G204800 Sobic008G162000--Sobic004G204800 Sobic002G044000--Sobic009G201800 Sobic003G358300 Sobic003G358300 Sobic002G044000--Sobic003G358300 Sobic002G044000--Sobic009G070200 Sobic001G285300 Sobic001G285300 Sobic002G044000--Sobic001G285300 Sobic006G143500 Sobic006G143500 Sobic002G044000--Sobic006G143500 Sobic004G032000 Sobic004G032000 Sobic002G044000--Sobic004G032000 Sobic001G126200 Sobic001G126200 Sobic002G044000--Sobic001G126200 Sobic002G044000--Sobic007G152400 Sobic002G386300 Sobic002G386300 Sobic002G044000--Sobic002G386300 Sobic005G111100 Sobic005G111100 Sobic007G152400--Sobic005G111100 Sobic007G091000 Sobic007G091000 Sobic007G152400--Sobic007G091000 Sobic002G428200 Sobic002G428200 Sobic007G152400--Sobic002G428200 Sobic002G257400 Sobic002G257400 Sobic007G152400--Sobic002G257400 Sobic001G128400 Sobic001G128400 Sobic007G152400--Sobic001G128400 Sobic001G481700 Sobic001G481700 Sobic007G152400--Sobic001G481700 Sobic008G137600 Sobic008G137600 Sobic007G152400--Sobic008G137600 Sobic007G152400--Sobic004G204800 Sobic002G331300 Sobic002G331300 Sobic007G152400--Sobic002G331300 Sobic010G266300 Sobic010G266300 Sobic009G070200--Sobic010G266300 Sobic001G066700 Sobic001G066700 Sobic009G070200--Sobic001G066700 Sobic009G070200--Sobic002G044000 Sobic008G134900 Sobic008G134900 Sobic009G070200--Sobic008G134900 Sobic002G261900 Sobic002G261900 Sobic009G070200--Sobic002G261900 Sobic009G070200--Sobic003G358300 Sobic009G120100 Sobic009G120100 Sobic009G070200--Sobic009G120100 Sobic003G043400 Sobic003G043400 Sobic009G070200--Sobic003G043400 Sobic009G070200--Sobic007G152400 Sobic006G095200--Sobic009G120100 Sobic007G012900 Sobic007G012900 Sobic006G095200--Sobic007G012900 Sobic006G095200--Sobic010G266300 Sobic007G117800 Sobic007G117800 Sobic006G095200--Sobic007G117800 Sobic010G008800 Sobic010G008800 Sobic006G095200--Sobic010G008800 Sobic003G148900 Sobic003G148900 Sobic006G095200--Sobic003G148900 Sobic006G095200--Sobic007G152400 Sobic006G095200--Sobic008G162000 Sobic006G095200--Sobic009G070200 Sobic006G139100 Sobic006G139100 Sobic004G282100--Sobic006G139100 Sobic003G121600 Sobic003G121600 Sobic004G282100--Sobic003G121600 Sobic004G282100--Sobic007G117800 Sobic004G154300 Sobic004G154300 Sobic004G282100--Sobic004G154300 Sobic004G282100--Sobic003G148900 Sobic004G282100--Sobic008G162000 Sobic004G282100--Sobic001G458200 Sobic004G282100--Sobic006G095200 Sobic003G150900 Sobic003G150900 Sobic004G282100--Sobic003G150900 Sobic009G201800--Sobic002G044000 Sobic004G010700 Sobic004G010700 Sobic009G201800--Sobic004G010700 Sobic004G249300 Sobic004G249300 Sobic009G201800--Sobic004G249300 Sobic001G382200 Sobic001G382200 Sobic009G201800--Sobic001G382200 Sobic009G258500 Sobic009G258500 Sobic009G201800--Sobic009G258500 Sobic009G212300 Sobic009G212300 Sobic009G201800--Sobic009G212300 Sobic009G201800--Sobic001G285300 Sobic009G234400 Sobic009G234400 Sobic009G201800--Sobic009G234400 Sobic003G028100 Sobic003G028100 Sobic009G201800--Sobic003G028100 Sobic003G192000 Sobic003G192000 Sobic001G458200--Sobic003G192000 Sobic003G128300 Sobic003G128300 Sobic001G458200--Sobic003G128300 Sobic001G532100 Sobic001G532100 Sobic001G458200--Sobic001G532100 Sobic002G359900 Sobic002G359900 Sobic001G458200--Sobic002G359900 Sobic001G458200--Sobic002G093900 Sobic001G458200--Sobic008G134900 Sobic001G458200--Sobic003G148900 Sobic002G306600 Sobic002G306600 Sobic001G458200--Sobic002G306600 Sobic001G458200--Sobic002G044000 Sobic002G093900--Sobic001G458200 Sobic001G428500 Sobic001G428500 Sobic002G093900--Sobic001G428500 Sobic002G093900--Sobic003G121600 Sobic002G093900--Sobic008G162000 Sobic002G093900--Sobic009G070200 Sobic002G093900--Sobic003G192000 Sobic003G416600 Sobic003G416600 Sobic002G093900--Sobic003G416600 Sobic001G050900 Sobic001G050900 Sobic002G093900--Sobic001G050900 Sobic007G140500 Sobic007G140500 Sobic002G093900--Sobic007G140500 Sobic004G204800--Sobic002G257400 Sobic004G204800--Sobic007G152400 Sobic004G335000 Sobic004G335000 Sobic004G204800--Sobic004G335000 Sobic004G204800--Sobic003G043400 Sobic004G204800--Sobic010G266300 Sobic001G058100 Sobic001G058100 Sobic004G204800--Sobic001G058100 Sobic004G204800--Sobic002G428200 Sobic003G428200 Sobic003G428200 Sobic004G204800--Sobic003G428200 Sobic001G010700 Sobic001G010700 Sobic004G204800--Sobic001G010700
Octagon: transcription factors


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