Gene annotation
Transcriptome id Sobic.006G207600.1
Synonym Sb06g027850
Functional annotation expressed protein
UniProt C5YFJ6
Pfam -
Panther DB PTHR36787
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G29960 : -
RAP-DB (Rice) LOC_Os04g51780.1 : expressed protein
MaizeGDB (Corn) Zm00025a009872 , Zm00025a056971
Brachypodium KQJ85886
Barley HORVU5Hr1G012220.4 , HORVU5Hr1G012220.5 , HORVU5Hr1G012220.1 , HORVU5Hr1G012220.2 , HORVU5Hr1G012220.3
Wheat TraesCS5D02G063600 , TraesCS5D02G063600 , TraesCS5B02G064600 , TraesCS5A02G052100 , TraesCS5B02G064600 , TraesCS5B02G064600 , TraesCS5A02G052100
Populus -


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cDNA sequences
Sobic.006G207600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G276100 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
2 Sobic.007G117800 cytochrome b561, putative, expressed K08360: cytochrome b-561
3 Sobic.001G031900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
4 Sobic.007G012900 50S ribosomal protein L19, chloroplast precursor, putative, expressed -
5 Sobic.004G344800 NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed K03953: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
6 Sobic.002G262200 expressed protein -
7 Sobic.010G007400 peptidase, T1 family, putative, expressed K02739: 20S proteasome subunit beta 2
8 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
9 Sobic.003G185500 expressed protein -
10 Sobic.004G159000 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
11 Sobic.003G148900 translation machinery-associated protein 20, putative, expressed K07575: PUA domain protein
12 Sobic.008G110500 UDP-N-acetylglucosamine transferase subunit ALG13, putative, expressed K07432: beta-1,4-N-acetylglucosaminyltransferase
13 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
14 Sobic.002G401700 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
15 Sobic.002G396700 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor, putative, expressed K03942: NADH dehydrogenase (ubiquinone) flavoprotein 1
16 Sobic.001G178500 chloroplast 30S ribosomal protein S19, putative, expressed K02965: RP-S19, small subunit ribosomal protein S19
17 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
18 Sobic.009G191400 NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed K03943: NADH dehydrogenase (ubiquinone) flavoprotein 2
19 Sobic.001G112400 cytochrome c oxidase assembly protein COX11, mitochondrial precursor, putative, expressed K02258: COX11, cytochrome c oxidase assembly protein subunit 11
20 Sobic.006G058900 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit


Gene co-expression network
sample Sobic006G207600 Sobic006G207600 Sobic003G276100 Sobic003G276100 Sobic006G207600--Sobic003G276100 Sobic007G117800 Sobic007G117800 Sobic006G207600--Sobic007G117800 Sobic001G031900 Sobic001G031900 Sobic006G207600--Sobic001G031900 Sobic007G012900 Sobic007G012900 Sobic006G207600--Sobic007G012900 Sobic004G344800 Sobic004G344800 Sobic006G207600--Sobic004G344800 Sobic002G262200 Sobic002G262200 Sobic006G207600--Sobic002G262200 Sobic010G007400 Sobic010G007400 Sobic006G207600--Sobic010G007400 Sobic001G443200 Sobic001G443200 Sobic006G207600--Sobic001G443200 Sobic003G185500 Sobic003G185500 Sobic006G207600--Sobic003G185500 Sobic003G276100--Sobic007G012900 Sobic006G041800 Sobic006G041800 Sobic003G276100--Sobic006G041800 Sobic001G008100 Sobic001G008100 Sobic003G276100--Sobic001G008100 Sobic007G119600 Sobic007G119600 Sobic003G276100--Sobic007G119600 Sobic003G276100--Sobic001G443200 Sobic009G191400 Sobic009G191400 Sobic003G276100--Sobic009G191400 Sobic001G387200 Sobic001G387200 Sobic003G276100--Sobic001G387200 Sobic001G178500 Sobic001G178500 Sobic003G276100--Sobic001G178500 Sobic003G276100--Sobic007G117800 Sobic003G148900 Sobic003G148900 Sobic007G117800--Sobic003G148900 Sobic007G117800--Sobic001G443200 Sobic002G401700 Sobic002G401700 Sobic007G117800--Sobic002G401700 Sobic007G117800--Sobic003G276100 Sobic007G117800--Sobic007G012900 Sobic005G184200 Sobic005G184200 Sobic007G117800--Sobic005G184200 Sobic004G159000 Sobic004G159000 Sobic007G117800--Sobic004G159000 Sobic003G200600 Sobic003G200600 Sobic007G117800--Sobic003G200600 Sobic007G117800--Sobic002G262200 Sobic006G058900 Sobic006G058900 Sobic001G031900--Sobic006G058900 Sobic004G202100 Sobic004G202100 Sobic001G031900--Sobic004G202100 Sobic002G395000 Sobic002G395000 Sobic001G031900--Sobic002G395000 Sobic001G350600 Sobic001G350600 Sobic001G031900--Sobic001G350600 Sobic001G031900--Sobic004G344800 Sobic003G152900 Sobic003G152900 Sobic001G031900--Sobic003G152900 Sobic004G170400 Sobic004G170400 Sobic001G031900--Sobic004G170400 Sobic001G458800 Sobic001G458800 Sobic001G031900--Sobic001G458800 Sobic004G030000 Sobic004G030000 Sobic001G031900--Sobic004G030000 Sobic001G181500 Sobic001G181500 Sobic007G012900--Sobic001G181500 Sobic007G012900--Sobic003G276100 Sobic007G012900--Sobic002G401700 Sobic007G012900--Sobic001G008100 Sobic007G012900--Sobic006G041800 Sobic007G012900--Sobic003G148900 Sobic003G135600 Sobic003G135600 Sobic007G012900--Sobic003G135600 Sobic007G012900--Sobic009G191400 Sobic002G079700 Sobic002G079700 Sobic007G012900--Sobic002G079700 Sobic001G073600 Sobic001G073600 Sobic004G344800--Sobic001G073600 Sobic004G344800--Sobic003G135600 Sobic004G344800--Sobic004G159000 Sobic001G035400 Sobic001G035400 Sobic004G344800--Sobic001G035400 Sobic004G344800--Sobic009G191400 Sobic004G344800--Sobic004G030000 Sobic004G344800--Sobic002G262200 Sobic002G396700 Sobic002G396700 Sobic004G344800--Sobic002G396700 Sobic004G344800--Sobic001G031900 Sobic002G262200--Sobic004G159000 Sobic009G224400 Sobic009G224400 Sobic002G262200--Sobic009G224400 Sobic002G262200--Sobic002G395000 Sobic002G262200--Sobic003G135600 Sobic002G262200--Sobic004G344800 Sobic002G262200--Sobic001G073600 Sobic001G112400 Sobic001G112400 Sobic002G262200--Sobic001G112400 Sobic007G013900 Sobic007G013900 Sobic002G262200--Sobic007G013900 Sobic002G262200--Sobic009G191400 Sobic010G007400--Sobic004G030000 Sobic002G090700 Sobic002G090700 Sobic010G007400--Sobic002G090700 Sobic003G116600 Sobic003G116600 Sobic010G007400--Sobic003G116600 Sobic010G007400--Sobic002G401700 Sobic010G007400--Sobic004G159000 Sobic010G007400--Sobic001G031900 Sobic010G007400--Sobic007G013900 Sobic010G007400--Sobic003G152900 Sobic001G074700 Sobic001G074700 Sobic010G007400--Sobic001G074700 Sobic008G102600 Sobic008G102600 Sobic001G443200--Sobic008G102600 Sobic004G000100 Sobic004G000100 Sobic001G443200--Sobic004G000100 Sobic004G039400 Sobic004G039400 Sobic001G443200--Sobic004G039400 Sobic001G443200--Sobic001G112400 Sobic001G443200--Sobic004G344800 Sobic002G141700 Sobic002G141700 Sobic001G443200--Sobic002G141700 Sobic010G040900 Sobic010G040900 Sobic001G443200--Sobic010G040900 Sobic001G443200--Sobic001G073600 Sobic001G443200--Sobic002G262200 Sobic003G185500--Sobic001G031900 Sobic003G185500--Sobic006G058900 Sobic003G141700 Sobic003G141700 Sobic003G185500--Sobic003G141700 Sobic003G185500--Sobic004G170400 Sobic003G185500--Sobic001G074700 Sobic007G114200 Sobic007G114200 Sobic003G185500--Sobic007G114200 Sobic007G171500 Sobic007G171500 Sobic003G185500--Sobic007G171500 Sobic007G019100 Sobic007G019100 Sobic003G185500--Sobic007G019100 Sobic001G342200 Sobic001G342200 Sobic003G185500--Sobic001G342200
Octagon: transcription factors


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