Gene annotation
Transcriptome id Sobic.002G305200.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QEB3
Pfam PF11321
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g32870.1 : expressed protein
MaizeGDB (Corn) Zm00025a014680
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
2 Sobic.008G071300 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
3 Sobic.003G351200 B4-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
4 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -
5 Sobic.003G234500 CA(PubMedID : 19549309)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
6 Sobic.008G098164 - -
7 Sobic.003G441000 rhoGAP domain containing protein, expressed -
8 Sobic.003G023732 - -
9 Sobic.006G197900 expressed protein -
10 Sobic.006G267100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.009G090566 - -
12 Sobic.009G189700 - -
13 Sobic.005G144000 glycosyltransferase, putative, expressed -
14 Sobic.002G308900 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
15 Sobic.001G503600 expressed protein -
16 Sobic.003G114600 TKL_IRAK_CrRLK1L-1.11 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
17 Sobic.010G111000 - -
18 Sobic.001G414650 - K08678: UXS1, UDP-glucuronate decarboxylase
19 Sobic.006G070564 - K01193: INV, beta-fructofuranosidase
20 Sobic.001G039100 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -


Gene co-expression network
sample Sobic002G305200 Sobic002G305200 Sobic003G212000 Sobic003G212000 Sobic002G305200--Sobic003G212000 Sobic008G071300 Sobic008G071300 Sobic002G305200--Sobic008G071300 Sobic003G351200 Sobic003G351200 Sobic002G305200--Sobic003G351200 Sobic003G137600 Sobic003G137600 Sobic002G305200--Sobic003G137600 Sobic003G234500 Sobic003G234500 Sobic002G305200--Sobic003G234500 Sobic008G098164 Sobic008G098164 Sobic002G305200--Sobic008G098164 Sobic003G441000 Sobic003G441000 Sobic002G305200--Sobic003G441000 Sobic003G023732 Sobic003G023732 Sobic002G305200--Sobic003G023732 Sobic006G197900 Sobic006G197900 Sobic002G305200--Sobic006G197900 Sobic003G212000--Sobic003G234500 Sobic003G212000--Sobic008G071300 Sobic002G113200 Sobic002G113200 Sobic003G212000--Sobic002G113200 Sobic006G267100 Sobic006G267100 Sobic003G212000--Sobic006G267100 Sobic009G189700 Sobic009G189700 Sobic003G212000--Sobic009G189700 Sobic005G144000 Sobic005G144000 Sobic003G212000--Sobic005G144000 Sobic001G503600 Sobic001G503600 Sobic003G212000--Sobic001G503600 Sobic002G389600 Sobic002G389600 Sobic003G212000--Sobic002G389600 Sobic002G170100 Sobic002G170100 Sobic003G212000--Sobic002G170100 Sobic008G071300--Sobic006G267100 Sobic008G071300--Sobic002G170100 Sobic003G114600 Sobic003G114600 Sobic008G071300--Sobic003G114600 Sobic002G283200 Sobic002G283200 Sobic008G071300--Sobic002G283200 Sobic003G290500 Sobic003G290500 Sobic008G071300--Sobic003G290500 Sobic001G039100 Sobic001G039100 Sobic008G071300--Sobic001G039100 Sobic002G340600 Sobic002G340600 Sobic008G071300--Sobic002G340600 Sobic006G105100 Sobic006G105100 Sobic008G071300--Sobic006G105100 Sobic008G071300--Sobic001G503600 Sobic009G090566 Sobic009G090566 Sobic003G351200--Sobic009G090566 Sobic003G351200--Sobic003G441000 Sobic010G142650 Sobic010G142650 Sobic003G351200--Sobic010G142650 Sobic010G111000 Sobic010G111000 Sobic003G351200--Sobic010G111000 Sobic006G214900 Sobic006G214900 Sobic003G351200--Sobic006G214900 Sobic004G120600 Sobic004G120600 Sobic003G351200--Sobic004G120600 Sobic006G069766 Sobic006G069766 Sobic003G351200--Sobic006G069766 Sobic003G351200--Sobic002G283200 Sobic005G114201 Sobic005G114201 Sobic003G351200--Sobic005G114201 Sobic004G173700 Sobic004G173700 Sobic003G137600--Sobic004G173700 Sobic003G137600--Sobic003G212000 Sobic003G137600--Sobic003G234500 Sobic006G120900 Sobic006G120900 Sobic003G137600--Sobic006G120900 Sobic003G137600--Sobic002G113200 Sobic001G365700 Sobic001G365700 Sobic003G137600--Sobic001G365700 Sobic007G212100 Sobic007G212100 Sobic003G137600--Sobic007G212100 Sobic003G284100 Sobic003G284100 Sobic003G137600--Sobic003G284100 Sobic003G137600--Sobic009G189700 Sobic003G234500--Sobic003G212000 Sobic003G234500--Sobic008G071300 Sobic003G234500--Sobic006G267100 Sobic003G234500--Sobic005G144000 Sobic003G234500--Sobic002G170100 Sobic003G234500--Sobic009G189700 Sobic004G180100 Sobic004G180100 Sobic003G234500--Sobic004G180100 Sobic008G122800 Sobic008G122800 Sobic003G234500--Sobic008G122800 Sobic003G110932 Sobic003G110932 Sobic003G234500--Sobic003G110932 Sobic010G034400 Sobic010G034400 Sobic008G098164--Sobic010G034400 Sobic001G094700 Sobic001G094700 Sobic008G098164--Sobic001G094700 Sobic003G441000--Sobic005G144000 Sobic001G112600 Sobic001G112600 Sobic003G441000--Sobic001G112600 Sobic003G441000--Sobic002G170100 Sobic009G242200 Sobic009G242200 Sobic003G441000--Sobic009G242200 Sobic001G279000 Sobic001G279000 Sobic003G441000--Sobic001G279000 Sobic004G358000 Sobic004G358000 Sobic003G441000--Sobic004G358000 Sobic003G441000--Sobic003G290500 Sobic008G055200 Sobic008G055200 Sobic003G441000--Sobic008G055200 Sobic005G170400 Sobic005G170400 Sobic003G441000--Sobic005G170400 Sobic003G023732--Sobic005G170400 Sobic001G172100 Sobic001G172100 Sobic003G023732--Sobic001G172100 Sobic003G023732--Sobic010G111000 Sobic010G155701 Sobic010G155701 Sobic003G023732--Sobic010G155701 Sobic005G207700 Sobic005G207700 Sobic003G023732--Sobic005G207700 Sobic002G073600 Sobic002G073600 Sobic003G023732--Sobic002G073600 Sobic003G023732--Sobic002G283200 Sobic004G042501 Sobic004G042501 Sobic003G023732--Sobic004G042501 Sobic003G019450 Sobic003G019450 Sobic003G023732--Sobic003G019450 Sobic007G081701 Sobic007G081701 Sobic006G197900--Sobic007G081701 Sobic002G223650 Sobic002G223650 Sobic006G197900--Sobic002G223650 Sobic006G276801 Sobic006G276801 Sobic006G197900--Sobic006G276801 Sobic009G177750 Sobic009G177750 Sobic006G197900--Sobic009G177750 Sobic002G266500 Sobic002G266500 Sobic006G197900--Sobic002G266500 Sobic004G075250 Sobic004G075250 Sobic006G197900--Sobic004G075250 Sobic003G250160 Sobic003G250160 Sobic006G197900--Sobic003G250160 Sobic004G258000 Sobic004G258000 Sobic006G197900--Sobic004G258000 Sobic001G467400 Sobic001G467400 Sobic006G197900--Sobic001G467400
Octagon: transcription factors


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