Gene annotation
Transcriptome id Sobic.004G006000.1
Synonym Sb04g000725
Functional annotation hypothetical protein
UniProt A0A194YM48
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g33510.1 : hypothetical protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G497000 RNA helicase SDE3, putative, expressed K18422: helicase MOV-10
2 Sobic.003G336900 inactive receptor kinase At2g26730 precursor, putative, expressed -
3 Sobic.009G120400 methyltransferase, putative, expressed -
4 Sobic.002G173400 expressed protein -
5 Sobic.001G211500 LIG1 - Putative DNA ligase I, expressed K10747: DNA ligase 1
6 Sobic.001G008300 expressed protein -
7 Sobic.004G102200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
8 Sobic.008G169400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed -
9 Sobic.002G052800 FAR1 family protein, expressed -
10 Sobic.003G299500 expressed protein -
11 Sobic.007G076200 VERNALIZATION-INSENSITIVE, putative, expressed -
12 Sobic.009G158900 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.010G143600 ATP-binding region, ATPase-like domain containing protein, expressed -
14 Sobic.010G024000 transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
15 Sobic.001G395200 cyclin-related protein, putative, expressed -
16 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
17 Sobic.008G131900 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@resistance protein LR10, putative, expressed -
18 Sobic.007G065300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
19 Sobic.007G032100 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
20 Sobic.004G215600 - K15271: HFM1, ATP-dependent DNA helicase HFM1/MER3


Gene co-expression network
sample Sobic004G006000 Sobic004G006000 Sobic001G497000 Sobic001G497000 Sobic004G006000--Sobic001G497000 Sobic003G336900 Sobic003G336900 Sobic004G006000--Sobic003G336900 Sobic009G120400 Sobic009G120400 Sobic004G006000--Sobic009G120400 Sobic002G173400 Sobic002G173400 Sobic004G006000--Sobic002G173400 Sobic001G211500 Sobic001G211500 Sobic004G006000--Sobic001G211500 Sobic001G008300 Sobic001G008300 Sobic004G006000--Sobic001G008300 Sobic004G102200 Sobic004G102200 Sobic004G006000--Sobic004G102200 Sobic008G169400 Sobic008G169400 Sobic004G006000--Sobic008G169400 Sobic002G052800 Sobic002G052800 Sobic004G006000--Sobic002G052800 Sobic001G497000--Sobic009G120400 Sobic001G497000--Sobic004G006000 Sobic001G497000--Sobic002G173400 Sobic003G194800 Sobic003G194800 Sobic001G497000--Sobic003G194800 Sobic003G299500 Sobic003G299500 Sobic001G497000--Sobic003G299500 Sobic003G045000 Sobic003G045000 Sobic001G497000--Sobic003G045000 Sobic010G143600 Sobic010G143600 Sobic001G497000--Sobic010G143600 Sobic001G497000--Sobic002G052800 Sobic007G034200 Sobic007G034200 Sobic001G497000--Sobic007G034200 Sobic009G158900 Sobic009G158900 Sobic003G336900--Sobic009G158900 Sobic009G024900 Sobic009G024900 Sobic003G336900--Sobic009G024900 Sobic006G193100 Sobic006G193100 Sobic003G336900--Sobic006G193100 Sobic008G131900 Sobic008G131900 Sobic003G336900--Sobic008G131900 Sobic010G024000 Sobic010G024000 Sobic003G336900--Sobic010G024000 Sobic003G336900--Sobic002G173400 Sobic009G175100 Sobic009G175100 Sobic003G336900--Sobic009G175100 Sobic008G004900 Sobic008G004900 Sobic003G336900--Sobic008G004900 Sobic001G026800 Sobic001G026800 Sobic003G336900--Sobic001G026800 Sobic009G120400--Sobic002G173400 Sobic002G426100 Sobic002G426100 Sobic009G120400--Sobic002G426100 Sobic009G120400--Sobic007G034200 Sobic009G120400--Sobic003G194800 Sobic004G215600 Sobic004G215600 Sobic009G120400--Sobic004G215600 Sobic007G105700 Sobic007G105700 Sobic009G120400--Sobic007G105700 Sobic009G120400--Sobic003G299500 Sobic007G186400 Sobic007G186400 Sobic009G120400--Sobic007G186400 Sobic001G051400 Sobic001G051400 Sobic009G120400--Sobic001G051400 Sobic002G173400--Sobic008G131900 Sobic002G173400--Sobic009G120400 Sobic002G173400--Sobic003G194800 Sobic008G047500 Sobic008G047500 Sobic002G173400--Sobic008G047500 Sobic002G173400--Sobic002G052800 Sobic010G038200 Sobic010G038200 Sobic002G173400--Sobic010G038200 Sobic002G173400--Sobic010G143600 Sobic004G000400 Sobic004G000400 Sobic002G173400--Sobic004G000400 Sobic005G060100 Sobic005G060100 Sobic002G173400--Sobic005G060100 Sobic006G106200 Sobic006G106200 Sobic001G211500--Sobic006G106200 Sobic007G209600 Sobic007G209600 Sobic001G211500--Sobic007G209600 Sobic007G031300 Sobic007G031300 Sobic001G211500--Sobic007G031300 Sobic009G052100 Sobic009G052100 Sobic001G211500--Sobic009G052100 Sobic003G411700 Sobic003G411700 Sobic001G211500--Sobic003G411700 Sobic001G211500--Sobic008G169400 Sobic007G076200 Sobic007G076200 Sobic001G211500--Sobic007G076200 Sobic002G271400 Sobic002G271400 Sobic001G211500--Sobic002G271400 Sobic001G211500--Sobic010G024000 Sobic002G319300 Sobic002G319300 Sobic001G008300--Sobic002G319300 Sobic001G008300--Sobic006G193100 Sobic007G160300 Sobic007G160300 Sobic001G008300--Sobic007G160300 Sobic010G192500 Sobic010G192500 Sobic001G008300--Sobic010G192500 Sobic001G155700 Sobic001G155700 Sobic001G008300--Sobic001G155700 Sobic001G390400 Sobic001G390400 Sobic001G008300--Sobic001G390400 Sobic003G031700 Sobic003G031700 Sobic001G008300--Sobic003G031700 Sobic001G493900 Sobic001G493900 Sobic001G008300--Sobic001G493900 Sobic009G202801 Sobic009G202801 Sobic001G008300--Sobic009G202801 Sobic003G298700 Sobic003G298700 Sobic004G102200--Sobic003G298700 Sobic004G274600 Sobic004G274600 Sobic004G102200--Sobic004G274600 Sobic006G270500 Sobic006G270500 Sobic004G102200--Sobic006G270500 Sobic007G165800 Sobic007G165800 Sobic004G102200--Sobic007G165800 Sobic001G199400 Sobic001G199400 Sobic004G102200--Sobic001G199400 Sobic008G008100 Sobic008G008100 Sobic004G102200--Sobic008G008100 Sobic002G186800 Sobic002G186800 Sobic004G102200--Sobic002G186800 Sobic004G102200--Sobic009G175100 Sobic003G070600 Sobic003G070600 Sobic004G102200--Sobic003G070600 Sobic001G079900 Sobic001G079900 Sobic008G169400--Sobic001G079900 Sobic003G153900 Sobic003G153900 Sobic008G169400--Sobic003G153900 Sobic008G169400--Sobic007G031300 Sobic009G141700 Sobic009G141700 Sobic008G169400--Sobic009G141700 Sobic002G370400 Sobic002G370400 Sobic008G169400--Sobic002G370400 Sobic001G494100 Sobic001G494100 Sobic008G169400--Sobic001G494100 Sobic002G293700 Sobic002G293700 Sobic008G169400--Sobic002G293700 Sobic008G169400--Sobic009G158900 Sobic003G397100 Sobic003G397100 Sobic008G169400--Sobic003G397100 Sobic002G052800--Sobic010G038200 Sobic010G009700 Sobic010G009700 Sobic002G052800--Sobic010G009700 Sobic009G136000 Sobic009G136000 Sobic002G052800--Sobic009G136000 Sobic002G052800--Sobic002G173400 Sobic002G052800--Sobic005G060100 Sobic008G140600 Sobic008G140600 Sobic002G052800--Sobic008G140600 Sobic002G052800--Sobic008G131900 Sobic003G301800 Sobic003G301800 Sobic002G052800--Sobic003G301800 Sobic009G168100 Sobic009G168100 Sobic002G052800--Sobic009G168100
Octagon: transcription factors


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