Gene annotation
Transcriptome id Sobic.002G300100.1
Synonym SbSAUR28, small auxin up RNA, Sb02g033080
Functional annotation "domain confirmed by Pfam database, expression not supported" (PubMedID : 20499123)
OsSAUR30 - Auxin-responsive SAUR gene family member, expressed
UniProt C5X8H7
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT1G20470 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os07g29310.1 : OsSAUR30 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a019398
Brachypodium KQK16304
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G358900 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.006G237600 expressed protein -
3 Sobic.007G151200 Cupin domain containing protein, expressed -
4 Sobic.006G158500 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
5 Sobic.005G121500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dehydrogenase/reductase, putative, expressed -
6 Sobic.007G038432 - -
7 Sobic.007G123200 heavy metal-associated domain containing protein, expressed -
8 Sobic.004G244200 expressed protein -
9 Sobic.001G310166 - -
10 Sobic.005G203600 - -
11 Sobic.002G099401 - -
12 Sobic.005G195700 ribonucleoside-diphosphate reductase small chain, putative, expressed K10808: ribonucleoside-diphosphate reductase subunit M2
13 Sobic.003G035332 - -
14 Sobic.003G035332 - -
15 Sobic.003G035332 - -
16 Sobic.010G221700 - -
17 Sobic.002G179700 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
18 Sobic.008G008500 protein phosphatase 2c, putative, expressed -
19 Sobic.002G348700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carboxyl-terminal peptidase, putative, expressed -
20 Sobic.007G045100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic002G300100 Sobic002G300100 Sobic001G358900 Sobic001G358900 Sobic002G300100--Sobic001G358900 Sobic006G237600 Sobic006G237600 Sobic002G300100--Sobic006G237600 Sobic007G151200 Sobic007G151200 Sobic002G300100--Sobic007G151200 Sobic006G158500 Sobic006G158500 Sobic002G300100--Sobic006G158500 Sobic005G121500 Sobic005G121500 Sobic002G300100--Sobic005G121500 Sobic007G038432 Sobic007G038432 Sobic002G300100--Sobic007G038432 Sobic007G123200 Sobic007G123200 Sobic002G300100--Sobic007G123200 Sobic004G244200 Sobic004G244200 Sobic002G300100--Sobic004G244200 Sobic001G310166 Sobic001G310166 Sobic002G300100--Sobic001G310166 Sobic001G358900--Sobic007G123200 Sobic001G358900--Sobic005G121500 Sobic007G210900 Sobic007G210900 Sobic001G358900--Sobic007G210900 Sobic005G227050 Sobic005G227050 Sobic001G358900--Sobic005G227050 Sobic001G358900--Sobic002G300100 Sobic008G008500 Sobic008G008500 Sobic001G358900--Sobic008G008500 Sobic006G001400 Sobic006G001400 Sobic001G358900--Sobic006G001400 Sobic006G060500 Sobic006G060500 Sobic001G358900--Sobic006G060500 Sobic009G196200 Sobic009G196200 Sobic001G358900--Sobic009G196200 Sobic006G237600--Sobic004G244200 Sobic008G100400 Sobic008G100400 Sobic006G237600--Sobic008G100400 Sobic007G225700 Sobic007G225700 Sobic006G237600--Sobic007G225700 Sobic006G237600--Sobic002G300100 Sobic010G157700 Sobic010G157700 Sobic006G237600--Sobic010G157700 Sobic001G236800 Sobic001G236800 Sobic006G237600--Sobic001G236800 Sobic003G176200 Sobic003G176200 Sobic006G237600--Sobic003G176200 Sobic008G186500 Sobic008G186500 Sobic006G237600--Sobic008G186500 Sobic009G241966 Sobic009G241966 Sobic006G237600--Sobic009G241966 Sobic001G275800 Sobic001G275800 Sobic007G151200--Sobic001G275800 Sobic007G151200--Sobic007G123200 Sobic007G151200--Sobic005G121500 Sobic002G201100 Sobic002G201100 Sobic007G151200--Sobic002G201100 Sobic007G151200--Sobic003G176200 Sobic007G151200--Sobic001G358900 Sobic005G020200 Sobic005G020200 Sobic007G151200--Sobic005G020200 Sobic007G151200--Sobic006G001400 Sobic005G218400 Sobic005G218400 Sobic007G151200--Sobic005G218400 Sobic005G084000 Sobic005G084000 Sobic006G158500--Sobic005G084000 Sobic006G158500--Sobic007G123200 Sobic010G006400 Sobic010G006400 Sobic006G158500--Sobic010G006400 Sobic006G158500--Sobic001G358900 Sobic004G143400 Sobic004G143400 Sobic006G158500--Sobic004G143400 Sobic005G203600 Sobic005G203600 Sobic006G158500--Sobic005G203600 Sobic008G117800 Sobic008G117800 Sobic006G158500--Sobic008G117800 Sobic006G158500--Sobic008G008500 Sobic001G142400 Sobic001G142400 Sobic006G158500--Sobic001G142400 Sobic005G121500--Sobic003G176200 Sobic005G121500--Sobic007G123200 Sobic005G121500--Sobic001G358900 Sobic008G130700 Sobic008G130700 Sobic005G121500--Sobic008G130700 Sobic005G121500--Sobic005G203600 Sobic007G090415 Sobic007G090415 Sobic005G121500--Sobic007G090415 Sobic005G121500--Sobic001G275800 Sobic003G029300 Sobic003G029300 Sobic005G121500--Sobic003G029300 Sobic005G121500--Sobic005G020200 Sobic003G035332 Sobic003G035332 Sobic007G038432--Sobic003G035332 Sobic002G099401 Sobic002G099401 Sobic007G038432--Sobic002G099401 Sobic005G195700 Sobic005G195700 Sobic007G038432--Sobic005G195700 Sobic007G104000 Sobic007G104000 Sobic007G038432--Sobic007G104000 Sobic010G221700 Sobic010G221700 Sobic007G038432--Sobic010G221700 Sobic004G043400 Sobic004G043400 Sobic007G038432--Sobic004G043400 Sobic007G038432--Sobic001G310166 Sobic007G123200--Sobic003G029300 Sobic007G123200--Sobic003G176200 Sobic007G123200--Sobic001G275800 Sobic007G123200--Sobic008G008500 Sobic007G123200--Sobic007G090415 Sobic007G123200--Sobic005G227050 Sobic004G151900 Sobic004G151900 Sobic007G123200--Sobic004G151900 Sobic007G123200--Sobic008G130700 Sobic007G123200--Sobic001G358900 Sobic005G102800 Sobic005G102800 Sobic004G244200--Sobic005G102800 Sobic004G244200--Sobic006G237600 Sobic004G248700 Sobic004G248700 Sobic004G244200--Sobic004G248700 Sobic005G047900 Sobic005G047900 Sobic004G244200--Sobic005G047900 Sobic009G119800 Sobic009G119800 Sobic004G244200--Sobic009G119800 Sobic009G155900 Sobic009G155900 Sobic004G244200--Sobic009G155900 Sobic003G434300 Sobic003G434300 Sobic004G244200--Sobic003G434300 Sobic004G057700 Sobic004G057700 Sobic004G244200--Sobic004G057700 Sobic008G018100 Sobic008G018100 Sobic004G244200--Sobic008G018100 Sobic001G310166--Sobic002G099401 Sobic001G310166--Sobic003G035332 Sobic001G310166--Sobic010G221700 Sobic009G113200 Sobic009G113200 Sobic001G310166--Sobic009G113200 Sobic001G310166--Sobic007G104000 Sobic001G310166--Sobic007G038432 Sobic001G310166--Sobic005G195700
Octagon: transcription factors


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