Gene annotation
Transcriptome id Sobic.006G158500.1
Synonym Sb06g023550
Functional annotation short-chain dehydrogenase/reductase, putative, expressed
UniProt C5YCV7
Pfam PF00106
Panther DB PTHR24322 PTHR24322:SF358
NCBI CDD KOG1208; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
KEGG Orthology K15095; (+)-neomenthol dehydrogenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G61220 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os04g44980.1 : short-chain dehydrogenase/reductase, putative, expressed
MaizeGDB (Corn) Zm00025a056581 , Zm00025a010452
Brachypodium -
Barley -
Wheat TraesCS2B02G388300 , TraesCS2B02G388300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G084000 expressed protein -
2 Sobic.007G123200 heavy metal-associated domain containing protein, expressed -
3 Sobic.010G006400 zinc finger, C3HC4 type domain containing protein, expressed K16281: RING-H2 zinc finger protein RHA1
4 Sobic.001G358900 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.004G143400 - -
6 Sobic.005G203600 - -
7 Sobic.008G117800 OsGrx_C12 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
8 Sobic.008G008500 protein phosphatase 2c, putative, expressed -
9 Sobic.001G142400 RIO1 family protein, expressed -
10 Sobic.006G060700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@basic proline-rich protein, putative, expressed -
11 Sobic.002G209900 ZOS9-12 - C2H2 zinc finger protein, expressed -
12 Sobic.009G083300 white-brown complex homolog protein 12, putative, expressed -
13 Sobic.001G384800 expressed protein -
14 Sobic.003G071600 3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed K10258: TER, TSC13, very-long-chain enoyl-CoA reductase
15 Sobic.007G090415 - -
16 Sobic.008G105300 expressed protein -
17 Sobic.002G300100 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR30 - Auxin-responsive SAUR gene family member, expressed -
18 Sobic.003G069200 transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
19 Sobic.005G121500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dehydrogenase/reductase, putative, expressed -
20 Sobic.004G006100 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic006G158500 Sobic006G158500 Sobic005G084000 Sobic005G084000 Sobic006G158500--Sobic005G084000 Sobic007G123200 Sobic007G123200 Sobic006G158500--Sobic007G123200 Sobic010G006400 Sobic010G006400 Sobic006G158500--Sobic010G006400 Sobic001G358900 Sobic001G358900 Sobic006G158500--Sobic001G358900 Sobic004G143400 Sobic004G143400 Sobic006G158500--Sobic004G143400 Sobic005G203600 Sobic005G203600 Sobic006G158500--Sobic005G203600 Sobic008G117800 Sobic008G117800 Sobic006G158500--Sobic008G117800 Sobic008G008500 Sobic008G008500 Sobic006G158500--Sobic008G008500 Sobic001G142400 Sobic001G142400 Sobic006G158500--Sobic001G142400 Sobic001G495300 Sobic001G495300 Sobic005G084000--Sobic001G495300 Sobic007G210600 Sobic007G210600 Sobic005G084000--Sobic007G210600 Sobic008G131700 Sobic008G131700 Sobic005G084000--Sobic008G131700 Sobic005G084000--Sobic001G142400 Sobic003G074700 Sobic003G074700 Sobic005G084000--Sobic003G074700 Sobic005G084000--Sobic004G143400 Sobic009G083300 Sobic009G083300 Sobic005G084000--Sobic009G083300 Sobic007G201400 Sobic007G201400 Sobic005G084000--Sobic007G201400 Sobic003G069200 Sobic003G069200 Sobic005G084000--Sobic003G069200 Sobic003G029300 Sobic003G029300 Sobic007G123200--Sobic003G029300 Sobic003G176200 Sobic003G176200 Sobic007G123200--Sobic003G176200 Sobic001G275800 Sobic001G275800 Sobic007G123200--Sobic001G275800 Sobic007G123200--Sobic008G008500 Sobic007G090415 Sobic007G090415 Sobic007G123200--Sobic007G090415 Sobic005G227050 Sobic005G227050 Sobic007G123200--Sobic005G227050 Sobic004G151900 Sobic004G151900 Sobic007G123200--Sobic004G151900 Sobic008G130700 Sobic008G130700 Sobic007G123200--Sobic008G130700 Sobic007G123200--Sobic001G358900 Sobic002G136900 Sobic002G136900 Sobic010G006400--Sobic002G136900 Sobic004G249500 Sobic004G249500 Sobic010G006400--Sobic004G249500 Sobic009G197200 Sobic009G197200 Sobic010G006400--Sobic009G197200 Sobic010G006400--Sobic006G158500 Sobic001G076200 Sobic001G076200 Sobic010G006400--Sobic001G076200 Sobic003G038000 Sobic003G038000 Sobic010G006400--Sobic003G038000 Sobic009G085100 Sobic009G085100 Sobic010G006400--Sobic009G085100 Sobic010G006400--Sobic003G176200 Sobic001G456200 Sobic001G456200 Sobic010G006400--Sobic001G456200 Sobic001G358900--Sobic007G123200 Sobic005G121500 Sobic005G121500 Sobic001G358900--Sobic005G121500 Sobic007G210900 Sobic007G210900 Sobic001G358900--Sobic007G210900 Sobic001G358900--Sobic005G227050 Sobic002G300100 Sobic002G300100 Sobic001G358900--Sobic002G300100 Sobic001G358900--Sobic008G008500 Sobic006G001400 Sobic006G001400 Sobic001G358900--Sobic006G001400 Sobic006G060500 Sobic006G060500 Sobic001G358900--Sobic006G060500 Sobic009G196200 Sobic009G196200 Sobic001G358900--Sobic009G196200 Sobic004G143400--Sobic005G084000 Sobic001G269300 Sobic001G269300 Sobic004G143400--Sobic001G269300 Sobic004G143400--Sobic007G210600 Sobic004G143400--Sobic001G495300 Sobic004G143400--Sobic004G151900 Sobic006G060200 Sobic006G060200 Sobic004G143400--Sobic006G060200 Sobic004G143400--Sobic008G008500 Sobic008G021700 Sobic008G021700 Sobic004G143400--Sobic008G021700 Sobic008G105300 Sobic008G105300 Sobic004G143400--Sobic008G105300 Sobic005G203600--Sobic001G275800 Sobic005G203600--Sobic007G090415 Sobic005G020200 Sobic005G020200 Sobic005G203600--Sobic005G020200 Sobic005G203600--Sobic008G130700 Sobic005G203600--Sobic006G001400 Sobic002G190100 Sobic002G190100 Sobic005G203600--Sobic002G190100 Sobic001G229500 Sobic001G229500 Sobic005G203600--Sobic001G229500 Sobic005G203600--Sobic007G123200 Sobic005G203600--Sobic005G121500 Sobic001G217700 Sobic001G217700 Sobic008G117800--Sobic001G217700 Sobic003G052300 Sobic003G052300 Sobic008G117800--Sobic003G052300 Sobic008G117800--Sobic007G201400 Sobic007G059500 Sobic007G059500 Sobic008G117800--Sobic007G059500 Sobic008G101500 Sobic008G101500 Sobic008G117800--Sobic008G101500 Sobic008G118000 Sobic008G118000 Sobic008G117800--Sobic008G118000 Sobic002G301700 Sobic002G301700 Sobic008G117800--Sobic002G301700 Sobic005G127000 Sobic005G127000 Sobic008G117800--Sobic005G127000 Sobic008G117800--Sobic005G084000 Sobic002G064400 Sobic002G064400 Sobic008G008500--Sobic002G064400 Sobic008G008500--Sobic009G083300 Sobic008G008500--Sobic007G123200 Sobic008G008500--Sobic008G130700 Sobic008G008500--Sobic002G190100 Sobic008G008500--Sobic007G090415 Sobic008G008500--Sobic001G142400 Sobic003G071600 Sobic003G071600 Sobic008G008500--Sobic003G071600 Sobic008G008500--Sobic006G060500 Sobic006G263800 Sobic006G263800 Sobic001G142400--Sobic006G263800 Sobic001G142400--Sobic005G084000 Sobic001G215300 Sobic001G215300 Sobic001G142400--Sobic001G215300 Sobic001G142400--Sobic002G190100 Sobic005G022800 Sobic005G022800 Sobic001G142400--Sobic005G022800 Sobic001G142400--Sobic007G201400 Sobic001G142400--Sobic008G021700 Sobic001G236800 Sobic001G236800 Sobic001G142400--Sobic001G236800 Sobic002G140000 Sobic002G140000 Sobic001G142400--Sobic002G140000
Octagon: transcription factors


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