Gene annotation
Transcriptome id Sobic.010G006400.1
Synonym BRH1, Sb10g000810
Functional annotation zinc finger, C3HC4 type domain containing protein, expressed
UniProt A0A194YGN6
Pfam PF13639
Panther DB PTHR14155 PTHR14155:SF175
NCBI CDD -
KEGG Orthology K16281; RING-H2 zinc finger protein RHA1
Gene Ontology GO:0008270; zinc ion binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT3G61460 : brassinosteroid-responsive RING-H2
RAP-DB (Rice) LOC_Os02g45710.1 : zinc finger, C3HC4 type domain containing protein, expressed
MaizeGDB (Corn) Zm00025a032327 , Zm00025a025816 , Zm00025a050294 , Zm00025a056729
Brachypodium -
Barley HORVU5Hr1G067200.1 , HORVU7Hr1G002690.1 , HORVU7Hr1G002750.1
Wheat TraesCS4A02G468600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G136900 - -
2 Sobic.004G249500 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
3 Sobic.009G197200 - -
4 Sobic.006G158500 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
5 Sobic.001G076200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf44, putative, expressed K07399: resB, cytochrome c biogenesis protein
6 Sobic.003G038000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Lipase class 3 family protein (At)(PubMedID : 27208977)@phospholipase, putative, expressed -
7 Sobic.009G085100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA3 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
8 Sobic.003G176200 - -
9 Sobic.001G456200 vacuolar sorting protein 9 domain-containing protein, putative, expressed -
10 Sobic.004G151900 - -
11 Sobic.007G123200 heavy metal-associated domain containing protein, expressed -
12 Sobic.004G315800 ZOS2-17 - C2H2 zinc finger protein, expressed -
13 Sobic.006G158000 expressed protein -
14 Sobic.008G068400 - -
15 Sobic.007G130100 armadillo/beta-catenin repeat family protein, putative, expressed -
16 Sobic.008G101500 powdery mildew resistance protein PM3b, putative, expressed -
17 Sobic.003G029300 lachrymatory factor synthase, putative, expressed -
18 Sobic.008G068601 - -
19 Sobic.001G275800 peptide transporter PTR2, putative, expressed -
20 Sobic.008G117800 OsGrx_C12 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3


Gene co-expression network
sample Sobic010G006400 Sobic010G006400 Sobic002G136900 Sobic002G136900 Sobic010G006400--Sobic002G136900 Sobic004G249500 Sobic004G249500 Sobic010G006400--Sobic004G249500 Sobic009G197200 Sobic009G197200 Sobic010G006400--Sobic009G197200 Sobic006G158500 Sobic006G158500 Sobic010G006400--Sobic006G158500 Sobic001G076200 Sobic001G076200 Sobic010G006400--Sobic001G076200 Sobic003G038000 Sobic003G038000 Sobic010G006400--Sobic003G038000 Sobic009G085100 Sobic009G085100 Sobic010G006400--Sobic009G085100 Sobic003G176200 Sobic003G176200 Sobic010G006400--Sobic003G176200 Sobic001G456200 Sobic001G456200 Sobic010G006400--Sobic001G456200 Sobic007G112700 Sobic007G112700 Sobic002G136900--Sobic007G112700 Sobic010G268200 Sobic010G268200 Sobic002G136900--Sobic010G268200 Sobic002G095900 Sobic002G095900 Sobic002G136900--Sobic002G095900 Sobic002G212800 Sobic002G212800 Sobic002G136900--Sobic002G212800 Sobic003G159450 Sobic003G159450 Sobic002G136900--Sobic003G159450 Sobic009G029500 Sobic009G029500 Sobic002G136900--Sobic009G029500 Sobic003G368800 Sobic003G368800 Sobic002G136900--Sobic003G368800 Sobic009G103500 Sobic009G103500 Sobic002G136900--Sobic009G103500 Sobic008G068601 Sobic008G068601 Sobic002G136900--Sobic008G068601 Sobic004G249500--Sobic001G076200 Sobic003G030400 Sobic003G030400 Sobic004G249500--Sobic003G030400 Sobic008G101500 Sobic008G101500 Sobic004G249500--Sobic008G101500 Sobic009G238100 Sobic009G238100 Sobic004G249500--Sobic009G238100 Sobic001G426400 Sobic001G426400 Sobic004G249500--Sobic001G426400 Sobic008G177850 Sobic008G177850 Sobic004G249500--Sobic008G177850 Sobic004G246800 Sobic004G246800 Sobic004G249500--Sobic004G246800 Sobic003G114100 Sobic003G114100 Sobic004G249500--Sobic003G114100 Sobic005G009300 Sobic005G009300 Sobic004G249500--Sobic005G009300 Sobic004G291800 Sobic004G291800 Sobic009G197200--Sobic004G291800 Sobic004G020401 Sobic004G020401 Sobic009G197200--Sobic004G020401 Sobic009G110366 Sobic009G110366 Sobic009G197200--Sobic009G110366 Sobic009G109450 Sobic009G109450 Sobic009G197200--Sobic009G109450 Sobic008G068400 Sobic008G068400 Sobic009G197200--Sobic008G068400 Sobic006G273100 Sobic006G273100 Sobic009G197200--Sobic006G273100 Sobic008G091671 Sobic008G091671 Sobic009G197200--Sobic008G091671 Sobic010G144100 Sobic010G144100 Sobic009G197200--Sobic010G144100 Sobic009G197200--Sobic002G212800 Sobic005G084000 Sobic005G084000 Sobic006G158500--Sobic005G084000 Sobic007G123200 Sobic007G123200 Sobic006G158500--Sobic007G123200 Sobic006G158500--Sobic010G006400 Sobic001G358900 Sobic001G358900 Sobic006G158500--Sobic001G358900 Sobic004G143400 Sobic004G143400 Sobic006G158500--Sobic004G143400 Sobic005G203600 Sobic005G203600 Sobic006G158500--Sobic005G203600 Sobic008G117800 Sobic008G117800 Sobic006G158500--Sobic008G117800 Sobic008G008500 Sobic008G008500 Sobic006G158500--Sobic008G008500 Sobic001G142400 Sobic001G142400 Sobic006G158500--Sobic001G142400 Sobic001G076200--Sobic004G246800 Sobic001G076200--Sobic003G030400 Sobic001G537700 Sobic001G537700 Sobic001G076200--Sobic001G537700 Sobic001G076200--Sobic003G114100 Sobic009G233800 Sobic009G233800 Sobic001G076200--Sobic009G233800 Sobic001G076200--Sobic004G249500 Sobic008G021700 Sobic008G021700 Sobic001G076200--Sobic008G021700 Sobic002G114700 Sobic002G114700 Sobic001G076200--Sobic002G114700 Sobic004G055600 Sobic004G055600 Sobic001G076200--Sobic004G055600 Sobic002G047100 Sobic002G047100 Sobic003G038000--Sobic002G047100 Sobic006G132200 Sobic006G132200 Sobic003G038000--Sobic006G132200 Sobic010G208500 Sobic010G208500 Sobic003G038000--Sobic010G208500 Sobic007G066050 Sobic007G066050 Sobic003G038000--Sobic007G066050 Sobic003G038000--Sobic009G197200 Sobic001G132500 Sobic001G132500 Sobic003G038000--Sobic001G132500 Sobic002G318900 Sobic002G318900 Sobic003G038000--Sobic002G318900 Sobic004G240900 Sobic004G240900 Sobic003G038000--Sobic004G240900 Sobic003G424100 Sobic003G424100 Sobic003G038000--Sobic003G424100 Sobic009G007800 Sobic009G007800 Sobic009G085100--Sobic009G007800 Sobic009G085100--Sobic002G114700 Sobic004G241500 Sobic004G241500 Sobic009G085100--Sobic004G241500 Sobic010G236900 Sobic010G236900 Sobic009G085100--Sobic010G236900 Sobic004G218500 Sobic004G218500 Sobic009G085100--Sobic004G218500 Sobic001G010800 Sobic001G010800 Sobic009G085100--Sobic001G010800 Sobic001G037500 Sobic001G037500 Sobic009G085100--Sobic001G037500 Sobic001G384800 Sobic001G384800 Sobic009G085100--Sobic001G384800 Sobic009G127400 Sobic009G127400 Sobic009G085100--Sobic009G127400 Sobic008G130700 Sobic008G130700 Sobic003G176200--Sobic008G130700 Sobic003G176200--Sobic007G123200 Sobic001G275800 Sobic001G275800 Sobic003G176200--Sobic001G275800 Sobic007G090415 Sobic007G090415 Sobic003G176200--Sobic007G090415 Sobic005G121500 Sobic005G121500 Sobic003G176200--Sobic005G121500 Sobic009G102800 Sobic009G102800 Sobic003G176200--Sobic009G102800 Sobic003G029300 Sobic003G029300 Sobic003G176200--Sobic003G029300 Sobic003G176200--Sobic008G008500 Sobic004G151900 Sobic004G151900 Sobic003G176200--Sobic004G151900 Sobic001G456200--Sobic004G249500 Sobic002G038300 Sobic002G038300 Sobic001G456200--Sobic002G038300 Sobic003G342700 Sobic003G342700 Sobic001G456200--Sobic003G342700 Sobic001G030500 Sobic001G030500 Sobic001G456200--Sobic001G030500 Sobic003G255100 Sobic003G255100 Sobic001G456200--Sobic003G255100 Sobic001G456200--Sobic010G006400 Sobic001G456200--Sobic003G114100 Sobic007G146700 Sobic007G146700 Sobic001G456200--Sobic007G146700 Sobic003G310800 Sobic003G310800 Sobic001G456200--Sobic003G310800
Octagon: transcription factors


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