Gene annotation
Transcriptome id Sobic.001G456200.1
Synonym
Functional annotation vacuolar sorting protein 9 domain-containing protein, putative, expressed
UniProt A0A1B6QPP3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G27750 : -
RAP-DB (Rice) LOC_Os04g39970.1 : vacuolar sorting protein 9 domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a035657
Brachypodium -
Barley HORVU3Hr1G025610.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G249500 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
2 Sobic.002G038300 RNA recognition motif containing protein, putative, expressed -
3 Sobic.003G342700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
4 Sobic.001G030500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
5 Sobic.003G255100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.010G006400 zinc finger, C3HC4 type domain containing protein, expressed K16281: RING-H2 zinc finger protein RHA1
7 Sobic.003G114100 expressed protein -
8 Sobic.007G146700 DUF581 domain containing protein, expressed -
9 Sobic.003G310800 expressed protein -
10 Sobic.001G255400 - -
11 Sobic.001G146100 expressed protein -
12 Sobic.001G120000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
13 Sobic.001G460200 PPR repeat domain containing protein, putative, expressed -
14 Sobic.004G007500 cytochrome P450, putative, expressed K10528: hydroperoxide lyase
15 Sobic.003G249100 HMG1/2, putative, expressed -
16 Sobic.009G138900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.009G238100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
18 Sobic.008G117800 OsGrx_C12 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
19 Sobic.010G182800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase 1, putative, expressed -
20 Sobic.004G179500 APO, putative, expressed -


Gene co-expression network
sample Sobic001G456200 Sobic001G456200 Sobic004G249500 Sobic004G249500 Sobic001G456200--Sobic004G249500 Sobic002G038300 Sobic002G038300 Sobic001G456200--Sobic002G038300 Sobic003G342700 Sobic003G342700 Sobic001G456200--Sobic003G342700 Sobic001G030500 Sobic001G030500 Sobic001G456200--Sobic001G030500 Sobic003G255100 Sobic003G255100 Sobic001G456200--Sobic003G255100 Sobic010G006400 Sobic010G006400 Sobic001G456200--Sobic010G006400 Sobic003G114100 Sobic003G114100 Sobic001G456200--Sobic003G114100 Sobic007G146700 Sobic007G146700 Sobic001G456200--Sobic007G146700 Sobic003G310800 Sobic003G310800 Sobic001G456200--Sobic003G310800 Sobic001G076200 Sobic001G076200 Sobic004G249500--Sobic001G076200 Sobic003G030400 Sobic003G030400 Sobic004G249500--Sobic003G030400 Sobic008G101500 Sobic008G101500 Sobic004G249500--Sobic008G101500 Sobic009G238100 Sobic009G238100 Sobic004G249500--Sobic009G238100 Sobic001G426400 Sobic001G426400 Sobic004G249500--Sobic001G426400 Sobic008G177850 Sobic008G177850 Sobic004G249500--Sobic008G177850 Sobic004G246800 Sobic004G246800 Sobic004G249500--Sobic004G246800 Sobic004G249500--Sobic003G114100 Sobic005G009300 Sobic005G009300 Sobic004G249500--Sobic005G009300 Sobic002G386400 Sobic002G386400 Sobic002G038300--Sobic002G386400 Sobic001G161300 Sobic001G161300 Sobic002G038300--Sobic001G161300 Sobic002G163700 Sobic002G163700 Sobic002G038300--Sobic002G163700 Sobic001G388400 Sobic001G388400 Sobic002G038300--Sobic001G388400 Sobic009G234200 Sobic009G234200 Sobic002G038300--Sobic009G234200 Sobic009G138900 Sobic009G138900 Sobic002G038300--Sobic009G138900 Sobic003G208300 Sobic003G208300 Sobic002G038300--Sobic003G208300 Sobic001G450600 Sobic001G450600 Sobic002G038300--Sobic001G450600 Sobic010G028000 Sobic010G028000 Sobic002G038300--Sobic010G028000 Sobic002G404900 Sobic002G404900 Sobic003G342700--Sobic002G404900 Sobic005G169600 Sobic005G169600 Sobic003G342700--Sobic005G169600 Sobic003G342700--Sobic009G234200 Sobic003G342700--Sobic002G038300 Sobic006G204100 Sobic006G204100 Sobic003G342700--Sobic006G204100 Sobic006G237100 Sobic006G237100 Sobic003G342700--Sobic006G237100 Sobic001G161400 Sobic001G161400 Sobic003G342700--Sobic001G161400 Sobic003G291300 Sobic003G291300 Sobic003G342700--Sobic003G291300 Sobic008G072300 Sobic008G072300 Sobic003G342700--Sobic008G072300 Sobic001G030500--Sobic003G255100 Sobic007G014600 Sobic007G014600 Sobic001G030500--Sobic007G014600 Sobic010G079700 Sobic010G079700 Sobic001G030500--Sobic010G079700 Sobic001G179100 Sobic001G179100 Sobic001G030500--Sobic001G179100 Sobic007G191900 Sobic007G191900 Sobic001G030500--Sobic007G191900 Sobic001G005500 Sobic001G005500 Sobic001G030500--Sobic001G005500 Sobic006G269400 Sobic006G269400 Sobic001G030500--Sobic006G269400 Sobic001G121100 Sobic001G121100 Sobic001G030500--Sobic001G121100 Sobic002G271600 Sobic002G271600 Sobic001G030500--Sobic002G271600 Sobic003G255100--Sobic010G079700 Sobic001G093600 Sobic001G093600 Sobic003G255100--Sobic001G093600 Sobic002G155900 Sobic002G155900 Sobic003G255100--Sobic002G155900 Sobic003G255100--Sobic001G005500 Sobic003G255100--Sobic001G179100 Sobic003G255100--Sobic001G030500 Sobic003G255100--Sobic006G269400 Sobic002G287000 Sobic002G287000 Sobic003G255100--Sobic002G287000 Sobic003G255100--Sobic007G191900 Sobic002G136900 Sobic002G136900 Sobic010G006400--Sobic002G136900 Sobic010G006400--Sobic004G249500 Sobic009G197200 Sobic009G197200 Sobic010G006400--Sobic009G197200 Sobic006G158500 Sobic006G158500 Sobic010G006400--Sobic006G158500 Sobic010G006400--Sobic001G076200 Sobic003G038000 Sobic003G038000 Sobic010G006400--Sobic003G038000 Sobic009G085100 Sobic009G085100 Sobic010G006400--Sobic009G085100 Sobic003G176200 Sobic003G176200 Sobic010G006400--Sobic003G176200 Sobic010G006400--Sobic001G456200 Sobic002G114700 Sobic002G114700 Sobic003G114100--Sobic002G114700 Sobic003G114100--Sobic001G076200 Sobic008G078900 Sobic008G078900 Sobic003G114100--Sobic008G078900 Sobic010G052500 Sobic010G052500 Sobic003G114100--Sobic010G052500 Sobic003G014000 Sobic003G014000 Sobic003G114100--Sobic003G014000 Sobic007G201400 Sobic007G201400 Sobic003G114100--Sobic007G201400 Sobic008G131700 Sobic008G131700 Sobic003G114100--Sobic008G131700 Sobic006G273400 Sobic006G273400 Sobic003G114100--Sobic006G273400 Sobic001G514100 Sobic001G514100 Sobic003G114100--Sobic001G514100 Sobic003G068600 Sobic003G068600 Sobic007G146700--Sobic003G068600 Sobic007G146700--Sobic001G030500 Sobic007G179750 Sobic007G179750 Sobic007G146700--Sobic007G179750 Sobic007G146700--Sobic007G014600 Sobic007G146700--Sobic007G191900 Sobic007G146700--Sobic003G255100 Sobic006G263000 Sobic006G263000 Sobic007G146700--Sobic006G263000 Sobic001G341800 Sobic001G341800 Sobic007G146700--Sobic001G341800 Sobic001G525900 Sobic001G525900 Sobic007G146700--Sobic001G525900 Sobic010G279100 Sobic010G279100 Sobic003G310800--Sobic010G279100 Sobic003G214800 Sobic003G214800 Sobic003G310800--Sobic003G214800 Sobic001G186200 Sobic001G186200 Sobic003G310800--Sobic001G186200 Sobic001G006000 Sobic001G006000 Sobic003G310800--Sobic001G006000 Sobic001G455500 Sobic001G455500 Sobic003G310800--Sobic001G455500 Sobic003G310800--Sobic002G038300 Sobic003G310800--Sobic010G028000 Sobic003G245800 Sobic003G245800 Sobic003G310800--Sobic003G245800 Sobic003G310800--Sobic001G388400
Octagon: transcription factors


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