Gene annotation
Transcriptome id Sobic.001G146100.1
Synonym Sb01g012760
Functional annotation expressed protein
UniProt C5WQE7
Pfam -
Panther DB PTHR33177 PTHR33177:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G16500 : -
RAP-DB (Rice) LOC_Os03g45870.1 : expressed protein
MaizeGDB (Corn) Zm00025a017189 , Zm00025a007538
Brachypodium KQK13881
Barley HORVU4Hr1G002540.1 , HORVU4Hr1G002540.3 , HORVU4Hr1G002540.2 , HORVU4Hr1G002540.4
Wheat TraesCS4D02G015300 , TraesCS4A02G296700
Populus -


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cDNA sequences
Sobic.001G146100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G161300 mttA/Hcf106 family protein, putative, expressed K03116: sec-independent protein translocase protein TatA
2 Sobic.006G269400 expressed protein -
3 Sobic.002G038300 RNA recognition motif containing protein, putative, expressed -
4 Sobic.003G421400 expressed protein -
5 Sobic.001G489800 HNH endonuclease domain-containing protein, putative, expressed -
6 Sobic.001G276100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
7 Sobic.001G281800 enzyme of the cupin superfamily protein, putative, expressed -
8 Sobic.004G343100 YCF37, putative, expressed -
9 Sobic.002G195700 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
10 Sobic.010G236900 expressed protein -
11 Sobic.008G081150 - -
12 Sobic.001G030500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
13 Sobic.004G007500 cytochrome P450, putative, expressed K10528: hydroperoxide lyase
14 Sobic.009G094800 sugar porter, putative, expressed -
15 Sobic.008G137800 expressed protein -
16 Sobic.003G254600 expressed protein -
17 Sobic.003G402200 sensitivity to red light reduced protein 1, putative, expressed -
18 Sobic.004G096100 expressed protein -
19 Sobic.009G156900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G196200 CRS1/YhbY domain containing protein, expressed -


Gene co-expression network
sample Sobic001G146100 Sobic001G146100 Sobic001G161300 Sobic001G161300 Sobic001G146100--Sobic001G161300 Sobic006G269400 Sobic006G269400 Sobic001G146100--Sobic006G269400 Sobic002G038300 Sobic002G038300 Sobic001G146100--Sobic002G038300 Sobic003G421400 Sobic003G421400 Sobic001G146100--Sobic003G421400 Sobic001G489800 Sobic001G489800 Sobic001G146100--Sobic001G489800 Sobic001G276100 Sobic001G276100 Sobic001G146100--Sobic001G276100 Sobic001G281800 Sobic001G281800 Sobic001G146100--Sobic001G281800 Sobic004G343100 Sobic004G343100 Sobic001G146100--Sobic004G343100 Sobic002G195700 Sobic002G195700 Sobic001G146100--Sobic002G195700 Sobic001G161300--Sobic002G038300 Sobic004G007500 Sobic004G007500 Sobic001G161300--Sobic004G007500 Sobic002G386400 Sobic002G386400 Sobic001G161300--Sobic002G386400 Sobic004G068700 Sobic004G068700 Sobic001G161300--Sobic004G068700 Sobic001G161300--Sobic001G276100 Sobic002G226100 Sobic002G226100 Sobic001G161300--Sobic002G226100 Sobic002G384400 Sobic002G384400 Sobic001G161300--Sobic002G384400 Sobic001G161300--Sobic004G343100 Sobic009G000900 Sobic009G000900 Sobic001G161300--Sobic009G000900 Sobic006G269400--Sobic002G195700 Sobic001G005500 Sobic001G005500 Sobic006G269400--Sobic001G005500 Sobic003G255100 Sobic003G255100 Sobic006G269400--Sobic003G255100 Sobic001G275200 Sobic001G275200 Sobic006G269400--Sobic001G275200 Sobic007G191900 Sobic007G191900 Sobic006G269400--Sobic007G191900 Sobic010G079700 Sobic010G079700 Sobic006G269400--Sobic010G079700 Sobic006G273000 Sobic006G273000 Sobic006G269400--Sobic006G273000 Sobic002G366100 Sobic002G366100 Sobic006G269400--Sobic002G366100 Sobic008G073400 Sobic008G073400 Sobic006G269400--Sobic008G073400 Sobic002G038300--Sobic002G386400 Sobic002G038300--Sobic001G161300 Sobic002G163700 Sobic002G163700 Sobic002G038300--Sobic002G163700 Sobic001G388400 Sobic001G388400 Sobic002G038300--Sobic001G388400 Sobic009G234200 Sobic009G234200 Sobic002G038300--Sobic009G234200 Sobic009G138900 Sobic009G138900 Sobic002G038300--Sobic009G138900 Sobic003G208300 Sobic003G208300 Sobic002G038300--Sobic003G208300 Sobic001G450600 Sobic001G450600 Sobic002G038300--Sobic001G450600 Sobic010G028000 Sobic010G028000 Sobic002G038300--Sobic010G028000 Sobic003G254600 Sobic003G254600 Sobic003G421400--Sobic003G254600 Sobic008G063200 Sobic008G063200 Sobic003G421400--Sobic008G063200 Sobic003G421400--Sobic004G343100 Sobic009G034600 Sobic009G034600 Sobic003G421400--Sobic009G034600 Sobic008G063100 Sobic008G063100 Sobic003G421400--Sobic008G063100 Sobic010G186400 Sobic010G186400 Sobic003G421400--Sobic010G186400 Sobic005G021600 Sobic005G021600 Sobic003G421400--Sobic005G021600 Sobic006G110900 Sobic006G110900 Sobic003G421400--Sobic006G110900 Sobic001G286600 Sobic001G286600 Sobic003G421400--Sobic001G286600 Sobic001G424300 Sobic001G424300 Sobic001G489800--Sobic001G424300 Sobic003G310100 Sobic003G310100 Sobic001G489800--Sobic003G310100 Sobic001G489800--Sobic003G254600 Sobic001G281500 Sobic001G281500 Sobic001G489800--Sobic001G281500 Sobic006G273400 Sobic006G273400 Sobic001G489800--Sobic006G273400 Sobic002G081500 Sobic002G081500 Sobic001G489800--Sobic002G081500 Sobic001G196200 Sobic001G196200 Sobic001G489800--Sobic001G196200 Sobic002G297400 Sobic002G297400 Sobic001G489800--Sobic002G297400 Sobic003G128400 Sobic003G128400 Sobic001G489800--Sobic003G128400 Sobic001G276100--Sobic001G161300 Sobic001G276100--Sobic009G000900 Sobic001G276100--Sobic004G007500 Sobic001G276100--Sobic002G226100 Sobic009G197300 Sobic009G197300 Sobic001G276100--Sobic009G197300 Sobic003G355800 Sobic003G355800 Sobic001G276100--Sobic003G355800 Sobic003G214000 Sobic003G214000 Sobic001G276100--Sobic003G214000 Sobic006G052200 Sobic006G052200 Sobic001G276100--Sobic006G052200 Sobic001G276100--Sobic002G384400 Sobic001G281800--Sobic004G007500 Sobic009G146400 Sobic009G146400 Sobic001G281800--Sobic009G146400 Sobic001G065500 Sobic001G065500 Sobic001G281800--Sobic001G065500 Sobic001G281800--Sobic009G138900 Sobic001G191000 Sobic001G191000 Sobic001G281800--Sobic001G191000 Sobic010G218600 Sobic010G218600 Sobic001G281800--Sobic010G218600 Sobic001G281800--Sobic001G161300 Sobic001G281800--Sobic009G000900 Sobic001G407900 Sobic001G407900 Sobic001G281800--Sobic001G407900 Sobic004G343100--Sobic008G063100 Sobic010G265500 Sobic010G265500 Sobic004G343100--Sobic010G265500 Sobic004G343100--Sobic005G021600 Sobic004G343100--Sobic003G421400 Sobic001G498300 Sobic001G498300 Sobic004G343100--Sobic001G498300 Sobic003G187000 Sobic003G187000 Sobic004G343100--Sobic003G187000 Sobic004G343100--Sobic001G161300 Sobic007G132500 Sobic007G132500 Sobic004G343100--Sobic007G132500 Sobic002G281000 Sobic002G281000 Sobic004G343100--Sobic002G281000 Sobic002G195700--Sobic001G005500 Sobic002G195700--Sobic008G073400 Sobic001G321600 Sobic001G321600 Sobic002G195700--Sobic001G321600 Sobic001G019300 Sobic001G019300 Sobic002G195700--Sobic001G019300 Sobic002G195700--Sobic002G366100 Sobic002G195700--Sobic002G281000 Sobic002G195700--Sobic005G021600 Sobic002G195700--Sobic006G269400 Sobic001G198700 Sobic001G198700 Sobic002G195700--Sobic001G198700
Octagon: transcription factors


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