Gene annotation
Transcriptome id Sobic.010G236900.1
Synonym Sb10g027850
Functional annotation expressed protein
UniProt C5Z8B2
Pfam PF12023
Panther DB PTHR33193 PTHR33193:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G09890 : Protein of unknown function (DUF3511)
RAP-DB (Rice) LOC_Os06g47220.1 : expressed protein
MaizeGDB (Corn) Zm00025a018188 , Zm00025a041846
Brachypodium KQK17246
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G236900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G489800 HNH endonuclease domain-containing protein, putative, expressed -
2 Sobic.001G010800 methionyl-tRNA synthetase, putative, expressed -
3 Sobic.002G353300 Geranilgeranil pyrophosphate synthetase 1 GGPS1 (Os)(PubMedID : 27208977)@polyprenyl synthetase, putative, expressed K13789: geranylgeranyl diphosphate synthase, type II
4 Sobic.003G254600 expressed protein -
5 Sobic.001G424300 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K08081: tropinone reductase I
6 Sobic.010G202300 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.009G085100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA3 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
8 Sobic.001G281500 OsClp11 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
9 Sobic.001G065500 ZOS3-19 - C2H2 zinc finger protein, expressed -
10 Sobic.001G384800 expressed protein -
11 Sobic.002G131700 RNA recognition motif containing protein, putative, expressed -
12 Sobic.006G107600 plastid-specific 30S ribosomal protein 3, chloroplast precursor, putative, expressed K19032: 30S ribosomal protein 3
13 Sobic.004G040600 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
14 Sobic.001G196200 CRS1/YhbY domain containing protein, expressed -
15 Sobic.001G006400 DANA2, putative, expressed -
16 Sobic.007G171800 RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
17 Sobic.001G168800 BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
18 Sobic.003G439000 rubredoxin family protein, putative, expressed -
19 Sobic.009G131600 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
20 Sobic.002G056800 YGGT family protein, putative, expressed -


Gene co-expression network
sample Sobic010G236900 Sobic010G236900 Sobic001G489800 Sobic001G489800 Sobic010G236900--Sobic001G489800 Sobic001G010800 Sobic001G010800 Sobic010G236900--Sobic001G010800 Sobic002G353300 Sobic002G353300 Sobic010G236900--Sobic002G353300 Sobic003G254600 Sobic003G254600 Sobic010G236900--Sobic003G254600 Sobic001G424300 Sobic001G424300 Sobic010G236900--Sobic001G424300 Sobic010G202300 Sobic010G202300 Sobic010G236900--Sobic010G202300 Sobic009G085100 Sobic009G085100 Sobic010G236900--Sobic009G085100 Sobic001G281500 Sobic001G281500 Sobic010G236900--Sobic001G281500 Sobic001G065500 Sobic001G065500 Sobic010G236900--Sobic001G065500 Sobic001G489800--Sobic001G424300 Sobic003G310100 Sobic003G310100 Sobic001G489800--Sobic003G310100 Sobic001G489800--Sobic003G254600 Sobic001G489800--Sobic001G281500 Sobic006G273400 Sobic006G273400 Sobic001G489800--Sobic006G273400 Sobic002G081500 Sobic002G081500 Sobic001G489800--Sobic002G081500 Sobic001G196200 Sobic001G196200 Sobic001G489800--Sobic001G196200 Sobic002G297400 Sobic002G297400 Sobic001G489800--Sobic002G297400 Sobic003G128400 Sobic003G128400 Sobic001G489800--Sobic003G128400 Sobic001G010800--Sobic001G489800 Sobic001G375000 Sobic001G375000 Sobic001G010800--Sobic001G375000 Sobic001G010800--Sobic003G310100 Sobic001G037500 Sobic001G037500 Sobic001G010800--Sobic001G037500 Sobic001G010800--Sobic003G128400 Sobic002G056800 Sobic002G056800 Sobic001G010800--Sobic002G056800 Sobic008G130900 Sobic008G130900 Sobic001G010800--Sobic008G130900 Sobic003G327200 Sobic003G327200 Sobic001G010800--Sobic003G327200 Sobic004G003900 Sobic004G003900 Sobic001G010800--Sobic004G003900 Sobic001G122400 Sobic001G122400 Sobic002G353300--Sobic001G122400 Sobic003G324700 Sobic003G324700 Sobic002G353300--Sobic003G324700 Sobic003G386300 Sobic003G386300 Sobic002G353300--Sobic003G386300 Sobic004G311100 Sobic004G311100 Sobic002G353300--Sobic004G311100 Sobic004G335800 Sobic004G335800 Sobic002G353300--Sobic004G335800 Sobic001G291900 Sobic001G291900 Sobic002G353300--Sobic001G291900 Sobic004G044200 Sobic004G044200 Sobic002G353300--Sobic004G044200 Sobic001G527100 Sobic001G527100 Sobic002G353300--Sobic001G527100 Sobic002G198000 Sobic002G198000 Sobic002G353300--Sobic002G198000 Sobic003G254600--Sobic001G196200 Sobic001G035800 Sobic001G035800 Sobic003G254600--Sobic001G035800 Sobic006G107600 Sobic006G107600 Sobic003G254600--Sobic006G107600 Sobic003G421400 Sobic003G421400 Sobic003G254600--Sobic003G421400 Sobic009G055800 Sobic009G055800 Sobic003G254600--Sobic009G055800 Sobic003G254600--Sobic001G489800 Sobic001G447700 Sobic001G447700 Sobic003G254600--Sobic001G447700 Sobic001G469900 Sobic001G469900 Sobic003G254600--Sobic001G469900 Sobic007G085800 Sobic007G085800 Sobic003G254600--Sobic007G085800 Sobic001G424300--Sobic003G310100 Sobic001G424300--Sobic001G489800 Sobic001G424300--Sobic003G128400 Sobic009G131600 Sobic009G131600 Sobic001G424300--Sobic009G131600 Sobic001G424300--Sobic001G281500 Sobic005G002900 Sobic005G002900 Sobic001G424300--Sobic005G002900 Sobic006G055800 Sobic006G055800 Sobic001G424300--Sobic006G055800 Sobic002G156100 Sobic002G156100 Sobic001G424300--Sobic002G156100 Sobic001G437200 Sobic001G437200 Sobic001G424300--Sobic001G437200 Sobic010G202300--Sobic002G353300 Sobic010G202300--Sobic003G324700 Sobic010G202300--Sobic003G386300 Sobic003G439000 Sobic003G439000 Sobic010G202300--Sobic003G439000 Sobic001G469933 Sobic001G469933 Sobic010G202300--Sobic001G469933 Sobic010G202300--Sobic001G122400 Sobic001G368500 Sobic001G368500 Sobic010G202300--Sobic001G368500 Sobic004G179200 Sobic004G179200 Sobic010G202300--Sobic004G179200 Sobic001G168800 Sobic001G168800 Sobic010G202300--Sobic001G168800 Sobic009G007800 Sobic009G007800 Sobic009G085100--Sobic009G007800 Sobic002G114700 Sobic002G114700 Sobic009G085100--Sobic002G114700 Sobic004G241500 Sobic004G241500 Sobic009G085100--Sobic004G241500 Sobic009G085100--Sobic010G236900 Sobic004G218500 Sobic004G218500 Sobic009G085100--Sobic004G218500 Sobic009G085100--Sobic001G010800 Sobic009G085100--Sobic001G037500 Sobic001G384800 Sobic001G384800 Sobic009G085100--Sobic001G384800 Sobic009G127400 Sobic009G127400 Sobic009G085100--Sobic009G127400 Sobic006G237100 Sobic006G237100 Sobic001G281500--Sobic006G237100 Sobic007G116100 Sobic007G116100 Sobic001G281500--Sobic007G116100 Sobic001G281500--Sobic006G107600 Sobic001G099000 Sobic001G099000 Sobic001G281500--Sobic001G099000 Sobic001G281500--Sobic001G375000 Sobic007G171800 Sobic007G171800 Sobic001G281500--Sobic007G171800 Sobic006G263800 Sobic006G263800 Sobic001G281500--Sobic006G263800 Sobic010G027200 Sobic010G027200 Sobic001G281500--Sobic010G027200 Sobic005G184300 Sobic005G184300 Sobic001G281500--Sobic005G184300 Sobic003G328200 Sobic003G328200 Sobic001G065500--Sobic003G328200 Sobic006G280050 Sobic006G280050 Sobic001G065500--Sobic006G280050 Sobic004G314800 Sobic004G314800 Sobic001G065500--Sobic004G314800 Sobic001G191000 Sobic001G191000 Sobic001G065500--Sobic001G191000 Sobic009G028400 Sobic009G028400 Sobic001G065500--Sobic009G028400 Sobic010G265500 Sobic010G265500 Sobic001G065500--Sobic010G265500 Sobic001G065500--Sobic006G107600 Sobic003G187000 Sobic003G187000 Sobic001G065500--Sobic003G187000 Sobic001G240000 Sobic001G240000 Sobic001G065500--Sobic001G240000
Octagon: transcription factors


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