Gene annotation
Transcriptome id Sobic.009G156900.1,Sobic.009G156900.2
Synonym Sb09g022010
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1Z5R2W8 , A0A1B6P8Q4
Pfam PF13432
Panther DB PTHR26312 PTHR26312:SF83
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G29670 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os05g37520.2,LOC_Os05g37520.1 : expressed protein
MaizeGDB (Corn) Zm00025a043786 , Zm00025a037200 , Zm00025a039609 , Zm00025a026811
Brachypodium KQK05985 , KQK10638
Barley HORVU3Hr1G084970.1 , HORVU3Hr1G084970.3 , HORVU3Hr1G084970.2 , HORVU3Hr1G084970.5 , HORVU3Hr1G084970.4 , HORVU1Hr1G073400.2 , HORVU1Hr1G073400.1 , HORVU1Hr1G073460.2 , HORVU1Hr1G073460.1
Wheat TraesCS3D02G361500 , TraesCS3A02G368600 , TraesCS1A02G278600 , TraesCS1D02G277900 , TraesCS3B02G400100 , TraesCS1B02G287500
Populus -


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cDNA sequences
Sobic.009G156900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G214000 Highly abundant under cold stress(PubMedID : 26645959)@heat shock protein DnaJ, putative, expressed -
2 Sobic.001G146100 expressed protein -
3 Sobic.001G030500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
4 Sobic.002G155900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.001G179100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast post-illumination chlorophyll fluorescence increase protein, putative, expressed -
6 Sobic.010G079700 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
7 Sobic.007G191900 ACT domain containing protein, expressed -
8 Sobic.001G276100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
9 Sobic.003G255100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.005G089000 gibberellin receptor GID1L2, putative, expressed -
11 Sobic.007G146700 DUF581 domain containing protein, expressed -
12 Sobic.010G268200 zinc finger, C3HC4 type, domain containing protein, expressed -
13 Sobic.007G014600 transferase family protein, putative, expressed -
14 Sobic.009G238100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
15 Sobic.004G018400 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
16 Sobic.001G161300 mttA/Hcf106 family protein, putative, expressed K03116: sec-independent protein translocase protein TatA
17 Sobic.001G341800 von Willebrand factor type A domain containing protein, expressed -
18 Sobic.003G026700 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
19 Sobic.003G359900 C2 domain containing protein, expressed -
20 Sobic.008G137800 expressed protein -


Gene co-expression network
sample Sobic009G156900 Sobic009G156900 Sobic003G214000 Sobic003G214000 Sobic009G156900--Sobic003G214000 Sobic001G146100 Sobic001G146100 Sobic009G156900--Sobic001G146100 Sobic001G030500 Sobic001G030500 Sobic009G156900--Sobic001G030500 Sobic002G155900 Sobic002G155900 Sobic009G156900--Sobic002G155900 Sobic001G179100 Sobic001G179100 Sobic009G156900--Sobic001G179100 Sobic010G079700 Sobic010G079700 Sobic009G156900--Sobic010G079700 Sobic007G191900 Sobic007G191900 Sobic009G156900--Sobic007G191900 Sobic001G276100 Sobic001G276100 Sobic009G156900--Sobic001G276100 Sobic003G255100 Sobic003G255100 Sobic009G156900--Sobic003G255100 Sobic003G214000--Sobic001G179100 Sobic004G068700 Sobic004G068700 Sobic003G214000--Sobic004G068700 Sobic004G078600 Sobic004G078600 Sobic003G214000--Sobic004G078600 Sobic003G214000--Sobic002G155900 Sobic001G320700 Sobic001G320700 Sobic003G214000--Sobic001G320700 Sobic008G137800 Sobic008G137800 Sobic003G214000--Sobic008G137800 Sobic009G075100 Sobic009G075100 Sobic003G214000--Sobic009G075100 Sobic001G201800 Sobic001G201800 Sobic003G214000--Sobic001G201800 Sobic008G111300 Sobic008G111300 Sobic003G214000--Sobic008G111300 Sobic001G161300 Sobic001G161300 Sobic001G146100--Sobic001G161300 Sobic006G269400 Sobic006G269400 Sobic001G146100--Sobic006G269400 Sobic002G038300 Sobic002G038300 Sobic001G146100--Sobic002G038300 Sobic003G421400 Sobic003G421400 Sobic001G146100--Sobic003G421400 Sobic001G489800 Sobic001G489800 Sobic001G146100--Sobic001G489800 Sobic001G146100--Sobic001G276100 Sobic001G281800 Sobic001G281800 Sobic001G146100--Sobic001G281800 Sobic004G343100 Sobic004G343100 Sobic001G146100--Sobic004G343100 Sobic002G195700 Sobic002G195700 Sobic001G146100--Sobic002G195700 Sobic001G030500--Sobic003G255100 Sobic007G014600 Sobic007G014600 Sobic001G030500--Sobic007G014600 Sobic001G030500--Sobic010G079700 Sobic001G030500--Sobic001G179100 Sobic001G030500--Sobic007G191900 Sobic001G005500 Sobic001G005500 Sobic001G030500--Sobic001G005500 Sobic001G030500--Sobic006G269400 Sobic001G121100 Sobic001G121100 Sobic001G030500--Sobic001G121100 Sobic002G271600 Sobic002G271600 Sobic001G030500--Sobic002G271600 Sobic002G155900--Sobic001G179100 Sobic002G155900--Sobic003G255100 Sobic002G155900--Sobic003G214000 Sobic006G152500 Sobic006G152500 Sobic002G155900--Sobic006G152500 Sobic002G155900--Sobic010G079700 Sobic009G085900 Sobic009G085900 Sobic002G155900--Sobic009G085900 Sobic001G410450 Sobic001G410450 Sobic002G155900--Sobic001G410450 Sobic004G217700 Sobic004G217700 Sobic002G155900--Sobic004G217700 Sobic002G287000 Sobic002G287000 Sobic002G155900--Sobic002G287000 Sobic001G179100--Sobic004G068700 Sobic001G179100--Sobic003G214000 Sobic001G179100--Sobic002G155900 Sobic001G179100--Sobic002G287000 Sobic009G238100 Sobic009G238100 Sobic001G179100--Sobic009G238100 Sobic001G179100--Sobic003G255100 Sobic001G179100--Sobic001G161300 Sobic001G179100--Sobic008G111300 Sobic002G366100 Sobic002G366100 Sobic001G179100--Sobic002G366100 Sobic010G079700--Sobic003G255100 Sobic010G079700--Sobic001G030500 Sobic010G079700--Sobic006G269400 Sobic010G079700--Sobic002G155900 Sobic001G093600 Sobic001G093600 Sobic010G079700--Sobic001G093600 Sobic010G079700--Sobic002G287000 Sobic010G079700--Sobic001G179100 Sobic010G079700--Sobic001G005500 Sobic010G079700--Sobic002G271600 Sobic007G191900--Sobic001G005500 Sobic001G321600 Sobic001G321600 Sobic007G191900--Sobic001G321600 Sobic007G191900--Sobic001G093600 Sobic007G191900--Sobic003G255100 Sobic001G525900 Sobic001G525900 Sobic007G191900--Sobic001G525900 Sobic007G191900--Sobic002G195700 Sobic007G191900--Sobic006G269400 Sobic002G281000 Sobic002G281000 Sobic007G191900--Sobic002G281000 Sobic006G273000 Sobic006G273000 Sobic007G191900--Sobic006G273000 Sobic001G276100--Sobic001G161300 Sobic009G000900 Sobic009G000900 Sobic001G276100--Sobic009G000900 Sobic004G007500 Sobic004G007500 Sobic001G276100--Sobic004G007500 Sobic002G226100 Sobic002G226100 Sobic001G276100--Sobic002G226100 Sobic009G197300 Sobic009G197300 Sobic001G276100--Sobic009G197300 Sobic003G355800 Sobic003G355800 Sobic001G276100--Sobic003G355800 Sobic001G276100--Sobic003G214000 Sobic006G052200 Sobic006G052200 Sobic001G276100--Sobic006G052200 Sobic002G384400 Sobic002G384400 Sobic001G276100--Sobic002G384400 Sobic003G255100--Sobic010G079700 Sobic003G255100--Sobic001G093600 Sobic003G255100--Sobic002G155900 Sobic003G255100--Sobic001G005500 Sobic003G255100--Sobic001G179100 Sobic003G255100--Sobic001G030500 Sobic003G255100--Sobic006G269400 Sobic003G255100--Sobic002G287000 Sobic003G255100--Sobic007G191900
Octagon: transcription factors


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