Gene annotation
Transcriptome id Sobic.007G151200.1
Synonym GLP1, ATGER1, GER1, Sb07g022510
Functional annotation Cupin domain containing protein, expressed
UniProt C5YM53
Pfam PF07883
Panther DB PTHR31238 PTHR31238:SF49
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G72610 : germin-like protein 1
RAP-DB (Rice) LOC_Os08g35750.1 : Cupin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005725 , Zm00025a005721
Brachypodium -
Barley HORVU7Hr1G036720.1 , HORVU7Hr1G036720.3 , HORVU7Hr1G036720.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G275800 peptide transporter PTR2, putative, expressed -
2 Sobic.007G123200 heavy metal-associated domain containing protein, expressed -
3 Sobic.005G121500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dehydrogenase/reductase, putative, expressed -
4 Sobic.002G201100 ZF-HD protein dimerisation region containing protein, expressed -
5 Sobic.003G176200 - -
6 Sobic.001G358900 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.005G020200 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.006G001400 Leucine Rich Repeat family protein, expressed -
9 Sobic.005G218400 NB-ARC domain containing protein, expressed -
10 Sobic.002G300100 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR30 - Auxin-responsive SAUR gene family member, expressed -
11 Sobic.005G227050 - -
12 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.008G130700 expressed protein -
14 Sobic.006G268700 expressed protein -
15 Sobic.008G008500 protein phosphatase 2c, putative, expressed -
16 Sobic.006G237600 expressed protein -
17 Sobic.004G170600 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.004G001200 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.001G061600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidase M50, mammalian sterol-regulatory element binding protein, putative, expressed -
20 Sobic.003G157500 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic007G151200 Sobic007G151200 Sobic001G275800 Sobic001G275800 Sobic007G151200--Sobic001G275800 Sobic007G123200 Sobic007G123200 Sobic007G151200--Sobic007G123200 Sobic005G121500 Sobic005G121500 Sobic007G151200--Sobic005G121500 Sobic002G201100 Sobic002G201100 Sobic007G151200--Sobic002G201100 Sobic003G176200 Sobic003G176200 Sobic007G151200--Sobic003G176200 Sobic001G358900 Sobic001G358900 Sobic007G151200--Sobic001G358900 Sobic005G020200 Sobic005G020200 Sobic007G151200--Sobic005G020200 Sobic006G001400 Sobic006G001400 Sobic007G151200--Sobic006G001400 Sobic005G218400 Sobic005G218400 Sobic007G151200--Sobic005G218400 Sobic005G203600 Sobic005G203600 Sobic001G275800--Sobic005G203600 Sobic007G090415 Sobic007G090415 Sobic001G275800--Sobic007G090415 Sobic001G275800--Sobic007G123200 Sobic001G229500 Sobic001G229500 Sobic001G275800--Sobic001G229500 Sobic008G130700 Sobic008G130700 Sobic001G275800--Sobic008G130700 Sobic001G275800--Sobic005G020200 Sobic005G218100 Sobic005G218100 Sobic001G275800--Sobic005G218100 Sobic001G275800--Sobic003G176200 Sobic001G275800--Sobic006G001400 Sobic003G029300 Sobic003G029300 Sobic007G123200--Sobic003G029300 Sobic007G123200--Sobic003G176200 Sobic007G123200--Sobic001G275800 Sobic008G008500 Sobic008G008500 Sobic007G123200--Sobic008G008500 Sobic007G123200--Sobic007G090415 Sobic005G227050 Sobic005G227050 Sobic007G123200--Sobic005G227050 Sobic004G151900 Sobic004G151900 Sobic007G123200--Sobic004G151900 Sobic007G123200--Sobic008G130700 Sobic007G123200--Sobic001G358900 Sobic005G121500--Sobic003G176200 Sobic005G121500--Sobic007G123200 Sobic005G121500--Sobic001G358900 Sobic005G121500--Sobic008G130700 Sobic005G121500--Sobic005G203600 Sobic005G121500--Sobic007G090415 Sobic005G121500--Sobic001G275800 Sobic005G121500--Sobic003G029300 Sobic005G121500--Sobic005G020200 Sobic003G333000 Sobic003G333000 Sobic002G201100--Sobic003G333000 Sobic009G196200 Sobic009G196200 Sobic002G201100--Sobic009G196200 Sobic002G201100--Sobic006G001400 Sobic009G055900 Sobic009G055900 Sobic002G201100--Sobic009G055900 Sobic010G107200 Sobic010G107200 Sobic002G201100--Sobic010G107200 Sobic002G201100--Sobic005G227050 Sobic005G196500 Sobic005G196500 Sobic002G201100--Sobic005G196500 Sobic009G154100 Sobic009G154100 Sobic002G201100--Sobic009G154100 Sobic002G201100--Sobic005G020200 Sobic003G176200--Sobic008G130700 Sobic003G176200--Sobic007G123200 Sobic003G176200--Sobic001G275800 Sobic003G176200--Sobic007G090415 Sobic003G176200--Sobic005G121500 Sobic009G102800 Sobic009G102800 Sobic003G176200--Sobic009G102800 Sobic003G176200--Sobic003G029300 Sobic003G176200--Sobic008G008500 Sobic003G176200--Sobic004G151900 Sobic001G358900--Sobic007G123200 Sobic001G358900--Sobic005G121500 Sobic007G210900 Sobic007G210900 Sobic001G358900--Sobic007G210900 Sobic001G358900--Sobic005G227050 Sobic002G300100 Sobic002G300100 Sobic001G358900--Sobic002G300100 Sobic001G358900--Sobic008G008500 Sobic001G358900--Sobic006G001400 Sobic006G060500 Sobic006G060500 Sobic001G358900--Sobic006G060500 Sobic001G358900--Sobic009G196200 Sobic003G157500 Sobic003G157500 Sobic005G020200--Sobic003G157500 Sobic009G059100 Sobic009G059100 Sobic005G020200--Sobic009G059100 Sobic005G200600 Sobic005G200600 Sobic005G020200--Sobic005G200600 Sobic004G253800 Sobic004G253800 Sobic005G020200--Sobic004G253800 Sobic005G020200--Sobic006G001400 Sobic005G056201 Sobic005G056201 Sobic005G020200--Sobic005G056201 Sobic005G141000 Sobic005G141000 Sobic005G020200--Sobic005G141000 Sobic006G025700 Sobic006G025700 Sobic005G020200--Sobic006G025700 Sobic005G020200--Sobic008G130700 Sobic006G001400--Sobic005G196500 Sobic004G001200 Sobic004G001200 Sobic006G001400--Sobic004G001200 Sobic006G001400--Sobic009G059100 Sobic006G001400--Sobic005G020200 Sobic010G124200 Sobic010G124200 Sobic006G001400--Sobic010G124200 Sobic006G001400--Sobic003G157500 Sobic006G233600 Sobic006G233600 Sobic006G001400--Sobic006G233600 Sobic006G172700 Sobic006G172700 Sobic006G001400--Sobic006G172700 Sobic006G001400--Sobic005G056201 Sobic005G218201 Sobic005G218201 Sobic005G218400--Sobic005G218201 Sobic006G263800 Sobic006G263800 Sobic005G218400--Sobic006G263800 Sobic005G218400--Sobic005G141000 Sobic002G065400 Sobic002G065400 Sobic005G218400--Sobic002G065400 Sobic005G218600 Sobic005G218600 Sobic005G218400--Sobic005G218600 Sobic005G218400--Sobic008G130700 Sobic005G218400--Sobic004G253800 Sobic002G190100 Sobic002G190100 Sobic005G218400--Sobic002G190100 Sobic006G281066 Sobic006G281066 Sobic005G218400--Sobic006G281066
Octagon: transcription factors


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