Gene annotation
Transcriptome id Sobic.003G001500.1
Synonym Sb03g000320
Functional annotation expressed protein
UniProt C5XJH5
Pfam -
Panther DB PTHR33785 PTHR33785:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G42760 : -
RAP-DB (Rice) LOC_Os01g13930.1 : expressed protein
MaizeGDB (Corn) Zm00025a022774
Brachypodium KQK03521
Barley HORVU3Hr1G032760.8 , HORVU3Hr1G032760.5 , HORVU3Hr1G032760.4 , HORVU3Hr1G032760.7 , HORVU3Hr1G032760.6 , HORVU3Hr1G032760.1 , HORVU3Hr1G032760.3 , HORVU3Hr1G032760.2
Wheat TraesCS3D02G169900 , TraesCS3A02G163000 , TraesCS3B02G194100
Populus -


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cDNA sequences
Sobic.003G001500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G416200 - -
2 Sobic.001G084600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
3 Sobic.006G073150 - -
4 Sobic.003G221300 - -
5 Sobic.004G074200 abhydrolase domain-containing protein FAM108C1, putative, expressed -
6 Sobic.010G153532 - -
7 Sobic.007G072800 OsFBX275 - F-box domain containing protein, expressed -
8 Sobic.006G004000 - -
9 Sobic.002G302100 pyridoxal-dependent decarboxylase protein, putative, expressed K01581: E4.1.1.17, ODC1, speC, ornithine decarboxylase
10 Sobic.002G175550 - -
11 Sobic.003G060400 transcription regulator, putative, expressed -
12 Sobic.005G097700 - -
13 Sobic.001G267266 - -
14 Sobic.006G086900 pectinesterase, putative, expressed -
15 Sobic.009G114600 OsSigP6 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K03100: signal peptidase I
16 Sobic.002G034400 expressed protein -
17 Sobic.006G068400 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@B-block binding subunit of TFIIIC("PubMedID : 26759170,PubMedID : 24597475")@seed storage 2S albumin superfamily("PubMedID : 26759170,PubMedID : 24597475")@transcription factor-related, putative, expressed K15199: general transcription factor 3C polypeptide 1
18 Sobic.008G061701 - -
19 Sobic.004G045566 - -
20 Sobic.003G290600 stress-induced protein, putative, expressed -


Gene co-expression network
sample Sobic003G001500 Sobic003G001500 Sobic002G416200 Sobic002G416200 Sobic003G001500--Sobic002G416200 Sobic001G084600 Sobic001G084600 Sobic003G001500--Sobic001G084600 Sobic006G073150 Sobic006G073150 Sobic003G001500--Sobic006G073150 Sobic003G221300 Sobic003G221300 Sobic003G001500--Sobic003G221300 Sobic004G074200 Sobic004G074200 Sobic003G001500--Sobic004G074200 Sobic010G153532 Sobic010G153532 Sobic003G001500--Sobic010G153532 Sobic007G072800 Sobic007G072800 Sobic003G001500--Sobic007G072800 Sobic006G004000 Sobic006G004000 Sobic003G001500--Sobic006G004000 Sobic002G302100 Sobic002G302100 Sobic003G001500--Sobic002G302100 Sobic002G416200--Sobic006G073150 Sobic002G416200--Sobic003G001500 Sobic002G416200--Sobic004G074200 Sobic005G114600 Sobic005G114600 Sobic002G416200--Sobic005G114600 Sobic002G416200--Sobic007G072800 Sobic002G034400 Sobic002G034400 Sobic002G416200--Sobic002G034400 Sobic004G038000 Sobic004G038000 Sobic002G416200--Sobic004G038000 Sobic002G416200--Sobic003G221300 Sobic002G416200--Sobic010G153532 Sobic001G084600--Sobic006G004000 Sobic006G204200 Sobic006G204200 Sobic001G084600--Sobic006G204200 Sobic004G315800 Sobic004G315800 Sobic001G084600--Sobic004G315800 Sobic002G104000 Sobic002G104000 Sobic001G084600--Sobic002G104000 Sobic006G060200 Sobic006G060200 Sobic001G084600--Sobic006G060200 Sobic001G217700 Sobic001G217700 Sobic001G084600--Sobic001G217700 Sobic003G178700 Sobic003G178700 Sobic001G084600--Sobic003G178700 Sobic001G269300 Sobic001G269300 Sobic001G084600--Sobic001G269300 Sobic010G092100 Sobic010G092100 Sobic001G084600--Sobic010G092100 Sobic001G451200 Sobic001G451200 Sobic006G073150--Sobic001G451200 Sobic006G073150--Sobic007G072800 Sobic006G073150--Sobic002G416200 Sobic001G267266 Sobic001G267266 Sobic006G073150--Sobic001G267266 Sobic003G048700 Sobic003G048700 Sobic006G073150--Sobic003G048700 Sobic003G290600 Sobic003G290600 Sobic006G073150--Sobic003G290600 Sobic002G018901 Sobic002G018901 Sobic006G073150--Sobic002G018901 Sobic002G120200 Sobic002G120200 Sobic006G073150--Sobic002G120200 Sobic006G073150--Sobic010G153532 Sobic005G097700 Sobic005G097700 Sobic003G221300--Sobic005G097700 Sobic002G004400 Sobic002G004400 Sobic003G221300--Sobic002G004400 Sobic003G221300--Sobic001G267266 Sobic002G175550 Sobic002G175550 Sobic003G221300--Sobic002G175550 Sobic007G210400 Sobic007G210400 Sobic003G221300--Sobic007G210400 Sobic003G221300--Sobic002G034400 Sobic006G228400 Sobic006G228400 Sobic003G221300--Sobic006G228400 Sobic010G145200 Sobic010G145200 Sobic003G221300--Sobic010G145200 Sobic007G085350 Sobic007G085350 Sobic003G221300--Sobic007G085350 Sobic009G114600 Sobic009G114600 Sobic004G074200--Sobic009G114600 Sobic004G074200--Sobic010G153532 Sobic004G074200--Sobic003G221300 Sobic004G074200--Sobic005G097700 Sobic004G074200--Sobic002G034400 Sobic004G074200--Sobic007G085350 Sobic004G074200--Sobic002G175550 Sobic004G074200--Sobic002G416200 Sobic003G219400 Sobic003G219400 Sobic004G074200--Sobic003G219400 Sobic010G153532--Sobic004G074200 Sobic010G153532--Sobic009G114600 Sobic010G153532--Sobic002G175550 Sobic010G153532--Sobic006G004000 Sobic010G153532--Sobic005G097700 Sobic010G153532--Sobic003G219400 Sobic010G153532--Sobic006G073150 Sobic010G153532--Sobic001G451200 Sobic010G153532--Sobic003G221300 Sobic007G072800--Sobic006G073150 Sobic002G108600 Sobic002G108600 Sobic007G072800--Sobic002G108600 Sobic007G072800--Sobic003G221300 Sobic007G072800--Sobic001G451200 Sobic003G060400 Sobic003G060400 Sobic007G072800--Sobic003G060400 Sobic007G072800--Sobic006G204200 Sobic009G213300 Sobic009G213300 Sobic007G072800--Sobic009G213300 Sobic010G146200 Sobic010G146200 Sobic007G072800--Sobic010G146200 Sobic006G249000 Sobic006G249000 Sobic007G072800--Sobic006G249000 Sobic006G004000--Sobic001G084600 Sobic006G004000--Sobic010G153532 Sobic006G004000--Sobic003G060400 Sobic006G004000--Sobic006G073150 Sobic006G004000--Sobic006G204200 Sobic006G019600 Sobic006G019600 Sobic006G004000--Sobic006G019600 Sobic001G361900 Sobic001G361900 Sobic006G004000--Sobic001G361900 Sobic010G060000 Sobic010G060000 Sobic006G004000--Sobic010G060000 Sobic006G004000--Sobic004G315800 Sobic002G302100--Sobic001G267266 Sobic001G049000 Sobic001G049000 Sobic002G302100--Sobic001G049000 Sobic002G302100--Sobic007G210400 Sobic001G378550 Sobic001G378550 Sobic002G302100--Sobic001G378550 Sobic002G302100--Sobic002G004400 Sobic002G302100--Sobic005G097700 Sobic003G343100 Sobic003G343100 Sobic002G302100--Sobic003G343100 Sobic002G302100--Sobic002G175550 Sobic003G174850 Sobic003G174850 Sobic002G302100--Sobic003G174850
Octagon: transcription factors


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