Gene annotation
Transcriptome id Sobic.009G010700.1
Synonym Sb09g001120
Functional annotation expressed protein
UniProt C5YYG3
Pfam -
Panther DB PTHR36389 PTHR36389:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G02160 : -
RAP-DB (Rice) LOC_Os05g01950.1 : expressed protein
MaizeGDB (Corn) Zm00025a038273
Brachypodium PNT72092
Barley -
Wheat TraesCS1D02G030500 , TraesCS1A02G030000
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G275200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
2 Sobic.003G088800 multi-copper oxidase type I family protein, putative, expressed -
3 Sobic.005G203900 OsGrx_C17 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
4 Sobic.003G163500 Electron carrierprotein disulfide oxidoreductase (At)(PubMedID : 27208977)@expressed protein K03676: grxC, GLRX, glutaredoxin 3
5 Sobic.008G117300 Glutaredoxin family protein (At)(PubMedID : 27208977)@OsGrx_C12 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
6 Sobic.001G066600 mTERF domain containing protein, expressed -
7 Sobic.006G273000 AT hook motif domain containing protein, expressed -
8 Sobic.002G215000 chlorophyll A-B binding protein, putative, expressed K08908: light-harvesting complex I chlorophyll a/b binding protein 2
9 Sobic.010G246600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed -
10 Sobic.010G092100 PCF-like (ClassI) Subclade 5 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP-domain protein, putative, expressed -
11 Sobic.007G221400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
12 Sobic.008G060150 - -
13 Sobic.005G204000 OsGrx_C17 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
14 Sobic.001G310800 lectin-like receptor kinase, putative, expressed -
15 Sobic.003G178700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
16 Sobic.010G146100 aquaporin protein, putative, expressed K09873: aquaporin TIP
17 Sobic.001G407900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase C, putative, expressed -
18 Sobic.010G194001 - -
19 Sobic.005G099700 expressed protein -
20 Sobic.003G369000 - -


Gene co-expression network
sample Sobic009G010700 Sobic009G010700 Sobic001G275200 Sobic001G275200 Sobic009G010700--Sobic001G275200 Sobic003G088800 Sobic003G088800 Sobic009G010700--Sobic003G088800 Sobic005G203900 Sobic005G203900 Sobic009G010700--Sobic005G203900 Sobic003G163500 Sobic003G163500 Sobic009G010700--Sobic003G163500 Sobic008G117300 Sobic008G117300 Sobic009G010700--Sobic008G117300 Sobic001G066600 Sobic001G066600 Sobic009G010700--Sobic001G066600 Sobic006G273000 Sobic006G273000 Sobic009G010700--Sobic006G273000 Sobic002G215000 Sobic002G215000 Sobic009G010700--Sobic002G215000 Sobic010G246600 Sobic010G246600 Sobic009G010700--Sobic010G246600 Sobic001G275200--Sobic006G273000 Sobic001G275200--Sobic003G088800 Sobic001G093600 Sobic001G093600 Sobic001G275200--Sobic001G093600 Sobic001G310800 Sobic001G310800 Sobic001G275200--Sobic001G310800 Sobic001G005500 Sobic001G005500 Sobic001G275200--Sobic001G005500 Sobic001G275200--Sobic005G203900 Sobic001G019300 Sobic001G019300 Sobic001G275200--Sobic001G019300 Sobic001G435500 Sobic001G435500 Sobic001G275200--Sobic001G435500 Sobic005G055900 Sobic005G055900 Sobic001G275200--Sobic005G055900 Sobic003G088800--Sobic001G275200 Sobic003G088800--Sobic001G435500 Sobic002G337001 Sobic002G337001 Sobic003G088800--Sobic002G337001 Sobic008G015100 Sobic008G015100 Sobic003G088800--Sobic008G015100 Sobic003G088800--Sobic001G019300 Sobic003G088800--Sobic005G055900 Sobic003G088800--Sobic005G203900 Sobic003G369000 Sobic003G369000 Sobic003G088800--Sobic003G369000 Sobic005G099700 Sobic005G099700 Sobic003G088800--Sobic005G099700 Sobic005G204000 Sobic005G204000 Sobic005G203900--Sobic005G204000 Sobic001G260850 Sobic001G260850 Sobic005G203900--Sobic001G260850 Sobic005G203900--Sobic008G117300 Sobic005G203900--Sobic003G088800 Sobic005G203900--Sobic001G275200 Sobic003G163700 Sobic003G163700 Sobic005G203900--Sobic003G163700 Sobic005G203900--Sobic001G435500 Sobic005G203900--Sobic001G019300 Sobic005G203900--Sobic005G055900 Sobic003G178700 Sobic003G178700 Sobic003G163500--Sobic003G178700 Sobic001G169200 Sobic001G169200 Sobic003G163500--Sobic001G169200 Sobic003G163500--Sobic003G163700 Sobic003G163500--Sobic009G010700 Sobic010G214600 Sobic010G214600 Sobic003G163500--Sobic010G214600 Sobic010G194001 Sobic010G194001 Sobic003G163500--Sobic010G194001 Sobic005G111200 Sobic005G111200 Sobic003G163500--Sobic005G111200 Sobic010G248301 Sobic010G248301 Sobic003G163500--Sobic010G248301 Sobic003G163500--Sobic010G246600 Sobic008G117300--Sobic005G204000 Sobic004G071750 Sobic004G071750 Sobic008G117300--Sobic004G071750 Sobic008G117300--Sobic001G066600 Sobic008G117300--Sobic005G203900 Sobic008G117300--Sobic001G260850 Sobic007G221400 Sobic007G221400 Sobic008G117300--Sobic007G221400 Sobic009G165200 Sobic009G165200 Sobic008G117300--Sobic009G165200 Sobic002G048501 Sobic002G048501 Sobic008G117300--Sobic002G048501 Sobic008G117300--Sobic003G163700 Sobic009G229700 Sobic009G229700 Sobic001G066600--Sobic009G229700 Sobic001G066600--Sobic009G165200 Sobic010G189300 Sobic010G189300 Sobic001G066600--Sobic010G189300 Sobic002G033900 Sobic002G033900 Sobic001G066600--Sobic002G033900 Sobic001G066600--Sobic008G117300 Sobic005G152600 Sobic005G152600 Sobic001G066600--Sobic005G152600 Sobic001G070500 Sobic001G070500 Sobic001G066600--Sobic001G070500 Sobic006G073500 Sobic006G073500 Sobic001G066600--Sobic006G073500 Sobic002G352100 Sobic002G352100 Sobic001G066600--Sobic002G352100 Sobic006G273000--Sobic001G275200 Sobic006G273000--Sobic001G093600 Sobic010G245100 Sobic010G245100 Sobic006G273000--Sobic010G245100 Sobic003G284300 Sobic003G284300 Sobic006G273000--Sobic003G284300 Sobic006G273000--Sobic001G005500 Sobic009G213400 Sobic009G213400 Sobic006G273000--Sobic009G213400 Sobic006G273000--Sobic010G246600 Sobic010G052500 Sobic010G052500 Sobic006G273000--Sobic010G052500 Sobic007G179750 Sobic007G179750 Sobic006G273000--Sobic007G179750 Sobic003G074700 Sobic003G074700 Sobic002G215000--Sobic003G074700 Sobic008G131700 Sobic008G131700 Sobic002G215000--Sobic008G131700 Sobic006G060200 Sobic006G060200 Sobic002G215000--Sobic006G060200 Sobic003G305300 Sobic003G305300 Sobic002G215000--Sobic003G305300 Sobic004G068300 Sobic004G068300 Sobic002G215000--Sobic004G068300 Sobic009G164300 Sobic009G164300 Sobic002G215000--Sobic009G164300 Sobic002G077000 Sobic002G077000 Sobic002G215000--Sobic002G077000 Sobic006G222700 Sobic006G222700 Sobic002G215000--Sobic006G222700 Sobic006G229300 Sobic006G229300 Sobic002G215000--Sobic006G229300 Sobic010G246600--Sobic006G273000 Sobic010G246600--Sobic001G093600 Sobic001G452700 Sobic001G452700 Sobic010G246600--Sobic001G452700 Sobic010G246600--Sobic001G275200 Sobic010G246600--Sobic010G052500 Sobic001G217700 Sobic001G217700 Sobic010G246600--Sobic001G217700 Sobic010G246600--Sobic007G179750 Sobic010G246600--Sobic003G284300 Sobic004G096300 Sobic004G096300 Sobic010G246600--Sobic004G096300
Octagon: transcription factors


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